Array 1 29446-29014 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LXZQ01000045.1 Ligilactobacillus salivarius strain KLA004 NODE_3_length_99083_cov_5.05067_ID_8131, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     29445	    36	 100.0	    30	....................................	TTACGGTAGAATGTATCTTCAATTTTTCTA	
     29379	    36	 100.0	    30	....................................	GCTACTACTCATTGTGAACTTAAACTGGTT	
     29313	    36	 100.0	    30	....................................	AGTACTAGCGGCTCATCTGCATATATACTA	
     29247	    36	  83.3	    30	.............TTG..T..........GT.....	CATTGAAGTTCGTATGGTGGATATCATCTA	
     29181	    36	  86.1	    30	............A.T.....A........GT.....	ATAGGTTTAATGATTGCTCCAATGGTTGAA	
     29115	    36	  83.3	    30	.......G....A.T......G.......GT.....	TCACGTTTATGTGAGTGATTATAATTCACA	
     29049	    36	  86.1	     0	.......G....A.T..............GC.....	|                             	
==========	======	======	======	====================================	==============================	==================
         7	    36	  91.3	    30	GTTCTGAACCTAGGCTAAATGACATAGGTTGAAGAC	                              	       

# Left flank :   AACTAGCAAAAAACAGTTAAGGCTCCTTAATGTTTGTTTTGCTGTTGAAAAAGAAAGTCACATCTAGGGTTACCTAAGCTTGTGGCTTTTTTTATTTTTTAACTTTTTTGAATTTTATTTTAAAAAAGTATACAAAAACATTTGACTTAGAGTGTGAGATAGTGTATCATAATAAACGTAAGGCAAAGGGTTAAGCCTACAGGGACATCAGTAAACTACATGTAAGCCTCTATCGTTCCTGTAAGCATTAGCACAAGCCTTATAATCTTAACTTTATCTTTATTCATTTATGTACATTTTATGTGTAGCGATGCCAAACGGTAGATCAATGCAGGTGCAATTCCTGCCATCGCTATTGGAGGACGCTTGTTCTCGACAGCTTGGTTAATATCTTTGACCTCTGTATAATCGCAAATTGCATTAGTTTGTTTACGATTATGCAAGTCTGAAGAGTTCCCAAGAAGCTTATGCCACAATTAAATACAGGTTAGAAAATAACG
# Right flank :  TGAAATCATGGGCTTAATTAAAGTCAAAACAACGATGTAGCTCAATGGTAGAGCAAAGCGAGGCGACGTAGGTTCGATTCCTACCATCGTTATTGGAGGGTGCTTGCTCTTCACAGTTTGGTTAACATCTTCGCAAACAAAGTTGCTGATTGCATTTCTTTGTTGAAGAGTTCCCAAAAAGCGCTGATAGCACAAATAAAGACGTCCATTGTGGAAGACTAATGTAGTGTAGTCAGCTGAAAGACTATACATAAATTACGTTGGTGTTTAAAAAGGAGTTGGAAAAAATGGAAGAAAAAGTTTTAGAAAGTCGTAGAATTAGAATTTATCCTACTAAGGATCAACAAGCATATTTAACGTTTAATATGTTTGCTAATATCAAGATGTGGAACGCATTACTAGCTGAAGTTTATAAGCCAGTTAGTGAGTTAGATGAAGTTCAAGCTTTACCTAGAAACAAACAAAGTAAAGAAGTTTATAAACGCATTGAAAGAATGTCA

# Questionable array : NO	 Score: 2.67
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.56, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCTGAACCTAGGCTAAATGACATAGGTTGAAGAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:58.33%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-6.00,-5.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [11-6] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [61.7-63.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,0.41   Confidence: LOW] 

# Array family : NA
//