Array 1 28775-27624 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAITC010000032.1 Anaerostipes hadrus strain MSK.14.49 NODE_32_length_28872_cov_127.324, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 28774 30 100.0 35 .............................. TAAAACACCTTGTCAGCATATTTTCTTTAGCCATA 28709 30 100.0 36 .............................. TTATGTCTAATTCTTTTGCAAGCCTAACGGGGTTTC 28643 30 100.0 35 .............................. AGAAATTGAATTTCCCAGTGATCGTTGAGATTACA 28578 30 100.0 37 .............................. TGTATGGTGCTAAAAAACGCATAAAACCGTTGTTTCT 28511 30 100.0 34 .............................. CTAACTGCGCGAGCCTCAAAAGCTCCACCCTTCT 28447 30 100.0 37 .............................. AGGAAGAACAATTCCAAAGAATAATCTTTTAGAGTAT 28380 30 100.0 35 .............................. TCTGTCTTTTTTAGTTAACTATATCTAAATTTAGT 28315 30 100.0 36 .............................. GAAAAAAGAATAATAATTCTTATCATAATACGACAG 28249 30 100.0 36 .............................. CTTTATTAAAATTTACTTTTCCTGTCATAATAAAAG 28183 30 100.0 36 .............................. GTATTCAATCCATACTGGACGCGATGGAAGTAGGTA 28117 30 100.0 37 .............................. TTATTAGGAGTTGAGGTAGTTTTCTTTTTTTTGATTT 28050 30 100.0 35 .............................. AAGTATCTATATCATGGATATTGTGACAATGTTAA 27985 30 100.0 37 .............................. CAGAAGGACACTTAAACTGCTTTAATTGGAAAGCACA 27918 30 100.0 37 .............................. AGAATTTGAAAAATTCTTTGATCAGTATATGAATGAA 27851 30 100.0 37 .............................. TAGAAAGCTTAAACCAGTATGGAGAAAGGAAACAGAA 27784 30 100.0 35 .............................. GTTATTACAGTTCTTTGCCACAATTCAGAAAACAA 27719 30 100.0 36 .............................. ATTCTTCTTCGATCGTTAGTGAGGTATAAAATCATG 27653 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 18 30 100.0 36 CTTTAAATTCCATTATGTTTCTATTAATTC # Left flank : AAGTAAAGTACTAGCATTCTATTATTCTAGCAACACCCTAAGATAAAGCGCTTACATTAATTCAAAGGAAAGTCAGTAAAAAAAGATGAATTAAAAT # Right flank : CCGTCCCAAAACCAACTGCTTATTTACTCCACGAAATACCTTTATTCTGTCGACCTCTTCAAAATATATCATTTCTTTCTCACTCTTCATCATATGTTTTAGCAACACCTCCTATTTTAGCCATTTTTTACTTCTGTCGATTCCCTGCGTTTTTTACACTATCACAGGTCGACAGAAATCATTATATTTTTATCATATCAAGTTTTTTATTAGCTTAACACTTCCTATTATGAATCCAATCAATCAAATATGCAACCCTAATATACAAATCCATATATAAACATTAAATTCTCTCCAAACAATATTCTAAATCATCCAAGAACATCATCCAGAGAGAACCCAACCATCTATTCCATATGCACTTTCACCTACTCCTCCACCTTAATCGAACTAATCACCACATCCCCCAACTGACACCCCACTTTCCGAACAACAATATCCTCAATCTGACTCCTCTCAACCTTCGACAAATCCTTCTTATTTACCAACACATCCACCTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTAAATTCCATTATGTTTCTATTAATTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 39888-39269 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAITC010000026.1 Anaerostipes hadrus strain MSK.14.49 NODE_26_length_39942_cov_98.7818, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 39887 30 100.0 37 .............................. TCAAGAGTCGTTAGAGATAAGATTGGTAAATATATGC 39820 30 100.0 35 .............................. TAATATTCAGCTTTTCTTTGATTCACATCGATCAA 39755 30 100.0 35 .............................. AAATTTATTCAAAAAAGTATTGACATAGCAATACT 39690 30 100.0 35 .............................. AAAGCTGTTGAACCACTTCCACCTGTGGTGTTATG 39625 30 100.0 36 .............................. TTGTTTCTCCTTTCTTACATCGCTAATCTGTATTTT 39559 30 100.0 35 .............................. TTCGAAGAAGATACAGAAGAGCTGATTGAAGAAGA 39494 30 100.0 34 .............................. CATACAAACAAAGTAGTAAATGGTTTGTTGTCCA 39430 30 100.0 36 .............................. TAAAAATAGCTTGCATTGCCTTGCGGATCGCAGTCG 39364 30 100.0 36 .............................. AATAACACGATCAGTATTGGAATAATTTTTTGTCTC 39298 30 86.7 0 .........A.......T..A........T | ========== ====== ====== ====== ============================== ===================================== ================== 10 30 98.7 36 GAATTAATAGAAACATAATGGAATTTAAAG # Left flank : TCATTATGACAGAATTTGTGTGGATTGAAAATCCACCCTTAGATAAAGCGCTTA # Right flank : CATTATAAAAAGATTTCCAATATGGACGATTGATATTAAATTCCGTTAATATAATTTAAATTTCAATATGAAAAATTATATTGATATTATAATAGATGGGTTTATAAAAAGCAACAAAAATTGTAACCGTTAATATAAGGATTGACAAAAAATAAGTACAGCAGTATTCTAAAAGTAGAAAGGAGAAATAACACCTATGCGTTTAGAATTACAAATGGAATTATTGAAACCAGAACTAGATATTGATTATCGTAGAATCATAATATCTTATCTAAAATTTGCATTAGAACATTGTGAAGGAGGAAGATTTTTCGAAAAGTTTTATAAAGATCGGGACAATATAGTTAAAGATTATTGCTTTTCAACATTTTTTAGTAAGCCACGATTCACAAAAGAAAAGATTTATTTTGATAAGAATGAAATGAAAATTATATTTTCATGCAGTGATAGGAATCGAACAGGATTGATTTTTCAGACGGCATTTTTATCAATTCAACATA # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAATTAATAGAAACATAATGGAATTTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //