Array 1 47-3315 **** Predicted by CRISPRDetect 2.4 *** >NZ_SJZB01000048.1 Parasulfuritortus cantonensis strain LSR1 tig00000042, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 47 37 100.0 36 ..................................... TTGGCGATCTTGCGGGGCATCCCGGTCAGGTCTGCG 120 37 100.0 34 ..................................... GCCGCCACGCCGGCCGCCTACGACCTGGCGCCGT 191 37 100.0 34 ..................................... GTCTCGCCCGCGGCCAACCTGGGTGCCGACTGCC 262 37 100.0 35 ..................................... GCTGGAACCGACCCTGAACACTGAATCGAGCATGG 334 37 100.0 35 ..................................... ATAGTATGGGGTCTCCATCGCCAGCCGGTGTGGGC 406 37 100.0 35 ..................................... CCGGATGAAACGGTGCAGGTCCAGGCCGTGGCGCG 478 37 100.0 35 ..................................... TCCATGATGCTCGCGGCCAGGGCTTCGGAGGCCAT 550 37 100.0 35 ..................................... CTGCGGGGAGAAGAAGTGATCCTTGCCATCCAGCC 622 37 100.0 34 ..................................... GACCAGCTCGACCTGACCCTGGCCGCGGCCAAGG 693 37 100.0 36 ..................................... TCCGCCGTCAACACGTCCATGTCGGACGGCCTGAAG 766 37 100.0 36 ..................................... TGATATTCCGCACAGATCACCCGCGCCCCCATTCCG 839 37 100.0 33 ..................................... TACGCCGTGGCGAGAGGTTGAAACTGCGTGGCG 909 37 100.0 34 ..................................... GAAATGCCCGGCAACAAATCACCAAACGACTCAT 980 37 100.0 35 ..................................... CGGGCTGCTCCATGTCACAAAAAATAGGGGTATTG 1052 37 100.0 35 ..................................... GCGGTACATCTTTCCTGATCCAGCGAAGGCATCGA 1124 37 100.0 35 ..................................... GAGGCGCAGCCGATCACCATCCTGCCGAACCTGGC 1196 37 100.0 34 ..................................... CCGCTCGGCCAGGATGCCGACCTGGGCGCTGGAG 1267 37 100.0 34 ..................................... AGCACTCAGCGGCAAACGTCGCCGTCAGCAGGAA 1338 37 100.0 34 ..................................... ATTGGCAACGGCGCCGACTCTCCAAACGCATCCG 1409 37 100.0 35 ..................................... AACCGGGCTGCGCACCTGTCCATGGGCGAGGCGGT 1481 37 100.0 34 ..................................... AGGCGGTGCGCACGGACCTGGCGCCGACCCGGAA 1552 37 100.0 37 ..................................... GCCGCACCAGGCGTCCCGGTCGTCGACGCGGATGCGG 1626 37 100.0 36 ..................................... TGCACATCTCCGTCGGTGATCGTCGGTAAGCCACAG 1699 37 100.0 36 ..................................... CAGCTGGAAGACGTGAGCGGTGGCACCGGCATCGAC 1772 37 100.0 34 ..................................... ACCTGCTAATTCAATTAGGTACTAGCACTGAACT 1843 37 100.0 35 ..................................... GGCTGGGTGGTGTTGATGGCCAAGGGCGGGGACTT 1915 37 100.0 34 ..................................... CCCTTTCGACCAAAAAAAGGCCACCGTCCCCCAA 1986 37 100.0 35 ..................................... CCGGCGACCAGCCAGAAAGCGACTCAGGAGCAAAT 2058 37 100.0 36 ..................................... ATGGTCAGCGCAGCGCCAAGGGTGCGGGCGCGGCGC 2131 37 100.0 35 ..................................... GCCCTGCTGGCGCGGATGGCCCAGGCCGCGCCGGC 2203 37 100.0 34 ..................................... AACGCTACCCGGCGCCACAGCCGGCACGGCGAGA 2274 37 100.0 34 ..................................... TTGCCGCAGGTGGGGCAGGTTCCCTTGCGCAGGT 2345 37 100.0 34 ..................................... TCCAGGTGGCCGCGCTGGTGCATGTCGTTCCAGT 2416 37 100.0 34 ..................................... CGCATTGCCGAGCCGCATCACGATGCGACACCAC 2487 37 100.0 35 ..................................... ATGCTGCGCTCGGTGGCGGCCGGCATCGGCGTCAG 2559 37 100.0 34 ..................................... ACGTCGGGGCGATGGCTCGTGATGGTGCCGGGGT 2630 37 100.0 37 ..................................... CGTGGTGATGGTGGGCAGCCAATTCGACCCCGCCGAG 2704 37 100.0 34 ..................................... GAGTGGCCGGTCAAGATCAGCACTCCGGGCGGAA 2775 37 100.0 36 ..................................... GTCGTCAAGCTGATCCGCGACGACTACGACGAAGCC 2848 37 100.0 37 ..................................... CCACTCAGCCATCCGCCAGTCCTCCGAGATCAACCAG 2922 37 100.0 34 ..................................... GGTCGCCCTATCTGCCGATGGCGTAGTCATGGCA 2993 37 100.0 35 ..................................... AAGAAGCGCATGCTGCACGCCGGCGCCGGGGCGAT 3065 37 100.0 35 ..................................... TCCCAGATCCAGTTCTGGCTGGCCACGTTCTTGCG 3137 37 100.0 34 ..................................... GGGCTCTCCACCAGTTCGCACAGCTCCCGCTCTT 3208 37 97.3 35 A.................................... ATCGAGCTTGATGACATCCGCACCCCGACGATCAC 3280 36 78.4 0 ........T............-..A.CC.A..C..G. | ========== ====== ====== ====== ===================================== ===================================== ================== 46 37 99.5 35 GATCCGCCCAGTCGCAAGGCTGGGCGTGGGTTGAAAC # Left flank : GTGGGTTGAAACCAGTGGCCCATTCCGTGCCGCGCCGGCCGCGGTGG # Right flank : CGGCTAGCGTTTCTTGCCCTGAGGACGTCCAAGTTAACTCGGTTGAGCAGCTGCACTGTCATTCGGAACTAAGGCAGAGTGCCCAATTCGGGGGCGGCGCTGCTTGACGATATTGCGCGCGAGGTTGGAGTGCCGAAGAGAGGTACGCCACCTTCGCAAAGGTTTGGCACCGTGCGTTGCCGACACCGCTATTGCCGCTGCCGCCGTTGCTCAGGCTCGGACAGCACGCGCAACACCACAGTCAGGGGGACGTTGTGGTCGCGCATGAACACATAGCCCTGACCGAATCCCTCCTGCTCGGCAATGGCAATCCCCTGGTCGACGAATGCCGCCGTCTGGTGGTCGGTACGGGGAATGGTCATCGTCACTTTCAACCCTCACGCGCCGGGCGCCATGGGCCTTCCGCACGTCGCAAAAACGCACACTCGCCCCTTTGGCGGCCGGTCGCTCGCCCATGTTGTGGAACTCAATAGGTAATAAATACCACTTTAGTATATATT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATCCGCCCAGTCGCAAGGCTGGGCGTGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-16.30,-10.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [21.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 2514-8334 **** Predicted by CRISPRDetect 2.4 *** >NZ_SJZB01000004.1 Parasulfuritortus cantonensis strain LSR1 tig00000045, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2514 28 85.7 33 ...T.G.....T..C............. ACCTCGGTCCGCTGCGGCAGCATCTTCGGCGGG 2575 28 96.4 33 .......................A.... CGGCCGATGAATCCAGACCGGCGGCGGGGCAGG 2636 28 100.0 33 ............................ ACCGCCCGATGACCTGGCTAAACGAAACCGACG 2697 28 100.0 33 ............................ CCTTAGGTGGTAAAGGTCACACCAACTCAGAGA 2758 28 100.0 33 ............................ CTCGATCAGGTCGTTGTGGCGCTCGGCATAGGT 2819 28 100.0 33 ............................ ACTAAGTCGGTCGCCATGCGCCTAGGGAATGAA 2880 28 100.0 33 ............................ ACCCTGGGGCTAGCCCCAGACCCACACGAGGGG 2941 28 100.0 33 ............................ CGAGAAAAATTGTCCGAATGGGAGGGCGGGCAG 3002 28 100.0 33 ............................ CGGCCATGTTGTTTCCTTTCTGTTTGTAAAAAA 3063 28 100.0 33 ............................ GGTGAATGGCAGCCACGCTTGTCGATCTTTGAA 3124 28 100.0 33 ............................ AAAGCGAGAACCGGCGCGACGCACCGGAATGGG 3185 28 100.0 33 ............................ TGGGCAGATTGACGTGACCAGTCCTAACAGTCG 3246 28 100.0 33 ............................ GCAGCAGACGAAGGTCGAGCCTGGAACGCAGGG 3307 28 100.0 33 ............................ TCGTCCTCGACAAACTCGAAGCGGACGCTGCCG 3368 28 100.0 33 ............................ GCCAAGCGCCTGGCCGGCGTCGATCGCCTGGAG 3429 28 100.0 33 ............................ TCTGAGCTGAAGGTTGGGAACGTTGGGCAGAGG 3490 28 100.0 33 ............................ CATTGCCAACGGCTTCAGCTAGGCCTGCCTGGG 3551 28 100.0 33 ............................ ACCATGATCGCAGCCGGCTTGGTGCTATCGGAG 3612 28 100.0 33 ............................ CTCCTGAGCTTGGTTGTTGCCCTCGGGTTGAAG 3673 28 100.0 33 ............................ ATGATGTCCTCGATACGTACGGTGCGGCCGTCG 3734 28 100.0 33 ............................ GTGAAGCAGGCTGACAGGCATGCCTTTTCGCGG 3795 28 100.0 33 ............................ CTCGAACGGTCTGCTTTTCGACCTTCAGGGAAA 3856 28 100.0 33 ............................ GAGCGCGTCGAGCTGGCAGTCTCGGCACGGTCG 3917 28 100.0 33 ............................ AATGCCTGGCCCATTTGGTGTCCAGCCGTGGAA 3978 28 100.0 33 ............................ AGCCACTTGACCGCATCGCGGCCGAAGGGAGGG 4039 28 100.0 33 ............................ CCGTAGTAGGTGCTGAACTCATGCCAGGTGTCG 4100 28 100.0 33 ............................ ACATCCTTGCCGCGCACGCCAAAGCGACCGAGA 4161 28 100.0 33 ............................ AACACCAGAGCCGCCAACACCAGCCAAATACGG 4222 28 100.0 33 ............................ TCAGCCACGCGGCCGGCACCGTCATCATGGCCG 4283 28 100.0 33 ............................ CCCTTGATGCGGTAGATTCGGAGGTTCATCAGG 4344 28 100.0 33 ............................ TTGCGCCCGCTGCTCGATGTGGCCGGAGAGAAG 4405 28 100.0 33 ............................ ACCGGCATCCTGTTCCTGCGTGGGCGGCTGACG 4466 28 100.0 33 ............................ CAGGTCGGCGCGGGCCTCGGTGAAGCTGGGAAG 4527 28 100.0 33 ............................ TTGTACCTAAAGCCCGACGCGGTCCTTACTACA 4588 28 100.0 33 ............................ GATCCCTTTTCTCGGACTGGTCCGGTACGCGCG 4649 28 100.0 32 ............................ CGTAGTAACCATAACGGCCCCACCCTCATCGG 4709 28 100.0 33 ............................ ACGCAAGCGTCCGCGCTGTCTAACGCGCAGACG 4770 28 100.0 33 ............................ GGTGATGACCGGGATGTCGGTGGTCTTCATCCA 4831 28 100.0 33 ............................ CAACCGGCTTTATATAACCGTTGGCATAGCTGG 4892 28 100.0 33 ............................ GTATTCTGGCCAATCTTGCTCGATTACCACGCA 4953 28 100.0 33 ............................ ACCGGTGCTCCGGCGACTGGGTGGAGTCCGAGC 5014 28 100.0 33 ............................ TCGATGCTGACGAAGAAGTTGGCCAGGTCCAGC 5075 28 100.0 33 ............................ CGGCGGACACCTGAAAGAAAGGAATGCGATGGC 5136 28 100.0 33 ............................ ACCGAACTGGTCGGGCAGGGCCCAATCGACGTG 5197 28 100.0 33 ............................ GCTTGGGGTGCGGGCTTTGCCCTCCCGGTCACG 5258 28 100.0 33 ............................ TTGCTCGTCGGGCCACTCGTCGCAGCTTGGGAA 5319 28 100.0 33 ............................ AAGTCAGGCATACCTTGCACGCTCCGGATATTA 5380 28 100.0 33 ............................ CTCAGCGAAAGCGCGATCCGTCGCCTCCGCAAG 5441 28 100.0 33 ............................ CCACCACGCCTCGATGCCCGCCACCAGGGCGAG 5502 28 100.0 33 ............................ GTACCCGCTTGAAATGAGCGACGGTAACGAGGG 5563 28 100.0 33 ............................ GCTGGCCCACCGTGCCAAAGGCCGGCACCTGCA 5624 28 100.0 33 ............................ GTGGCTCCGTTGACGGTCTCCCGGACGGCCCGG 5685 28 100.0 33 ............................ CATCCGCCGAATTCGTAGTCGTCGAGCTCGACG 5746 28 100.0 33 ............................ GAGGGGATCACTACGGTAGAGGTGCCGGCGACA 5807 28 100.0 33 ............................ CCGATCGGCAGGTCCACGTTGCGCCAGGCGCCG 5868 28 100.0 33 ............................ TACGTGCCGGACGGGCAAGTTTGGGCCACAGCA 5929 28 100.0 33 ............................ GCAGAGGAGCAGATCGAGCTGCTCAAGGGGTTG 5990 28 100.0 33 ............................ TCAGCCAAGCCTGGCCAGATCGTGCTTGACCCG 6051 28 100.0 33 ............................ CATCACCGTCACCTGCCACCCGACCCGCTACGG 6112 28 100.0 33 ............................ AACGTGATCGCCGCGCGACGCAGCGGCACAACG 6173 28 100.0 33 ............................ TTGTTGGCGGTGTCCGGGTCATACTCGGCCTGG 6234 28 100.0 33 ............................ GGGTTGCTGTTTGTTTCGGGGTTCAAAACATGA 6295 28 100.0 33 ............................ GGGCGCAGGCGTCAACCAATGCGGCCGGATTGG 6356 28 100.0 33 ............................ GTGCTGGCAGGTGAGGCGGATTATGGCCAAACA 6417 28 100.0 33 ............................ GGATTCTGATGTTCGGGTTCGGAAAATCCCGAG 6478 28 100.0 33 ............................ GCGGGGAATAAAAAAGGCCGGTTTCCGCCCAGG 6539 28 100.0 33 ............................ ACAAGGACGGCAACGACCGATACACCACCGAGA 6600 28 100.0 33 ............................ CCAGTGGCCCCGCTGTTGATGCGCCCGACAGCG 6661 28 100.0 33 ............................ TTGATACCTTCAACGACCACTACGGCCCTTGGG 6722 28 100.0 33 ............................ GAGGCCGTAGCTCCGACGGCCAAGCTCATTTCG 6783 28 100.0 33 ............................ CATTGGCACCACGCCTCGATGGTGAAGTCGACG 6844 28 100.0 33 ............................ GCGCGAGGTGGCCGAGCCGAGCGTGGTCTGCAG 6905 28 100.0 33 ............................ GCGCTTGCGCTCGCCGTGGAGTTCGCACCAGCG 6966 28 100.0 33 ............................ GGCTCATCGTCCGGGATGAGGCGCGTGGTGCCG 7027 28 100.0 33 ............................ ACCGGCTTCTTGGCACCGTAGTCGAAGCGCTGG 7088 28 100.0 33 ............................ TCCATTCTGACCGGCAGCTTGTCGGTGCGATAG 7149 28 100.0 32 ............................ TTTTGTATTTTCTGCGGGGCCGATTCCATATC 7209 28 100.0 33 ............................ CGCAACTTCGCGGCCTACCCGCGCCAGATACCG 7270 28 100.0 33 ............................ AGTATGCCGCTATCCTCACCGACCCCAAGGGGC 7331 28 100.0 33 ............................ GCCACCTGGTAGCCGCCGGCCATGACGATCTCG 7392 28 100.0 33 ............................ CTGGTACGACGCCGAGCGGGTCAAGCAGCCTGG 7453 28 100.0 33 ............................ GGCGAGCGCAGCATGGCCAAGACCGTGGCCATG 7514 28 100.0 33 ............................ CTCTACGTAGACCTTGTGGCCGTCAGTGGTCAG 7575 28 100.0 33 ............................ TAGGTCAGGACGATGTTGTCCGTGTTGGCGACA 7636 28 100.0 33 ............................ CGGAACACGCGGCCGTTGAGCTGCCACATGCCG 7697 28 100.0 33 ............................ GACCAGAACGAGGAGTCAAGCACGACCGACGGG 7758 28 100.0 33 ............................ TGAACAGCATGGTTACTCCTTCGGTTGAACGGG 7819 28 100.0 33 ............................ ACAACGAGGAATTCGAGTCGTTCGACGATGCGG 7880 28 100.0 33 ............................ ATGCTGGAAATCTACAGCGACTACGCCGTCGAA 7941 28 100.0 33 ............................ TTCTCCGGTTTCCGGCCTCCCACTGCTGCCATG 8002 28 100.0 33 ............................ GCCAGTCCAGGCCCCGGACGGGAAACCCATGTG 8063 28 100.0 33 ............................ GGATTTTGTGTGACTTGCGGCGACTGCGAAACG 8124 28 100.0 33 ............................ CTGGTGAGCATGTGGGCGACGCAGTCGACCTCG 8185 28 100.0 33 ............................ CTGGTGAGCATGTGGGCGACGCAGTCGACCTCG 8246 28 100.0 33 ............................ GCCAGATCGGCCCCTGGGCGGGCATTCGTTGGC 8307 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 96 28 99.8 33 GGTCGATCCCCGCGTGAGCGGGGGAAGC # Left flank : ACAGCGGCTTCGCCTTCAACGTCAGGACGTTCTCCGACCTCGGCAGAAAGGTCACCATGATCGCGGCCAACCCCGAGGGCGTGGTCGACCATGCCTTCCGGAACGCCGCCGTGAACGCGCGCGACGTCACCATCGTCAAGCGCGACCAATTCTGTCTGGTGCGGCTTCGCCGCGCGCTCGTGGCCGGCGACGTCATCTGCTCGGCAGTCGATTACCGTTCGGAGCAGGCGGGGCAATACGACCTGGTCAGTCCGTCCCTGTTCGATTTTTCCGCCGCATTCGGCGTGCCGCTGTATTGCACGTATACCTCGGTGGACCCGGATGGCGTTACCGAAGGCGTCATCGAGGGGCCGCTCGAAGGCGACAGCGCGGAGAGACTGGAACAATTCATGGCGTTTCTGAAGGAACACAGACCGGGGGCGCGCTACGCCGTGCGGCGCTACTGATAGCGTACGTTCGGAGCCCACGACTTTCCGAACGGGTCTTGTGGCCCCACTCCC # Right flank : CTCTACACAACAATAGCTTGAATTATTGCGAATTTTTAAAGAACGGGAACGTGGCAGGCTGTTAGAAGGCCATCTACAGCAACTATCTTGATCGGTGGTACGCCCAATGTTCGTACGGCCTGACCGCAGGGGACGGTGGGGTCGGCCCAGACCATGATTACCGAAGCGCTATCTTCGTGGGGGAACCAGTCAGCCACCACGGCCCAGATGCGCTCGCGTACCGCGGGCGAAATGTGTGGTGTGCTGTACACGCCGGGGGCCAATTCCAGCAGCGAGGAAGAGAGGAAGCCCCGCATCCGATCACTGACGTTTCGGGTCACCAAGAGAGTCATGGTCACCGAGCAACTCCTTTACGCGGTCGATCATTTTCGGGATGAGTTTGTAGCGGCGGAATTCCATGGCTGCCTCACGGCGCAGTGTGCGTTCCAGATTCAGTCTCTTGTCGTCGAGGACACGGCGAGCGATGCGAAAGGCAAGGGGGATGGTGACTTCGGCACGGT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTCGATCCCCGCGTGAGCGGGGGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.90,-12.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.68 Confidence: LOW] # Array family : NA //