Array 1 2083771-2076927 **** Predicted by CRISPRDetect 2.4 *** >NZ_NEMB01000003.1 Acetivibrio saccincola strain A7 contig00000, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 2083770 30 100.0 36 .............................. AAACCTCCTAACTTCCCGATATAGTCGGAATATAAG 2083704 30 100.0 36 .............................. GTTTTGCAACAGGGTTTAAAGCTATTGGCAGGGAAA 2083638 30 100.0 37 .............................. ATATACTACCAAAAATAACACTAAAAGTTAAACCATG 2083571 30 100.0 37 .............................. TAAACCAAAGTCTCAGGTTGCCTATATTCATAACTAA 2083504 30 100.0 36 .............................. ATGCCAAATTTTGATGTTATGTTGCCTGAAGGTCCG 2083438 30 100.0 37 .............................. GAAAGTTATCGCAGGAGGTTTGGTTTAAAAAGTTTGG 2083371 30 100.0 38 .............................. GCTGCTTTTCCTACATCTCCAAATCCATCCTCTACATC 2083303 30 100.0 36 .............................. GTAACATACCCAGCGAGAGCACCTATGTCTAGCTGT 2083237 30 100.0 37 .............................. GTAGAAGGTCTAAAAGATGGGCTAAATCAATTCCTTG 2083170 30 100.0 35 .............................. AGCATTTAGGATACTTCTTTCTCATACGCTCCAAG 2083105 30 100.0 38 .............................. TAATCAAACATTTTGGATATTTTTTTCTCATTCTCTCT 2083037 30 100.0 36 .............................. TGCTAAATGTTTCAGTCTATGAGAAGCTACAGAATG 2082971 30 100.0 37 .............................. GGAGGAATGAAAAATGATTAATAGTATGGCTTTTATA 2082904 30 100.0 37 .............................. TAATAGAATCAAAAGAAAAAGTAGAAAAAGTAGAAAA 2082837 30 100.0 37 .............................. AATCTTCTCCCATATAGTAACGTGATTTATATATTAC 2082770 30 100.0 38 .............................. CACTCAATAAATTGACACTATCTGAAGCAAAACAATTC 2082702 30 100.0 36 .............................. ACCAAACCTTTGCAATTGTCTATTACAATTTCAGAA 2082636 30 100.0 37 .............................. TTCTCCCTTCACAACGTGGTTGACTGTCCCTACCTCA 2082569 30 100.0 37 .............................. AACATCAAAGTATATTTTTCTTTCGCCATTAACAAGG 2082502 30 100.0 37 .............................. TGTCAAATATTTGGGAAAAGTTTGATAAGGTGATTGA 2082435 30 100.0 36 .............................. TAGTGCAGACCTTGAAAGGGGTTATAATGCAACAGG 2082369 30 100.0 36 .............................. TATTGGACTGAGTTATACTCACAGCACCTTTGGCTA 2082303 30 100.0 37 .............................. TTAGCAATTTCAACACTTCCATCAATTTTTTCTATAG 2082236 30 100.0 37 .............................. TAGCCTGTTATCTTAATATATCTCTTATTTTCTTATT 2082169 30 100.0 40 .............................. CCTGTCCCTGTGATGTCGTCAATCAAAACCTCTATAGATG 2082099 30 100.0 36 .............................. GTAATCATTTTCCAGAGTTTATGGAATCTGTTTTCA 2082033 30 100.0 37 .............................. CCAACGGTGACTTTATTGTAGATAAATGGGAGTTCAG 2081966 30 100.0 37 .............................. ATGTCTTTTTAAGTAGTATAAAAGACATATTTGATGG 2081899 30 100.0 37 .............................. CTGCTACTACATCAACTGCATTGTCGTTTATTCTTGG 2081832 30 100.0 36 .............................. CGGTCCTAAAAAGGATTGGTTGTCTAAAGCATATGG 2081766 30 100.0 36 .............................. GCCAGCGTCGGATCATAATACCCCGATGCATTCTTC 2081700 30 100.0 38 .............................. CCGTTCTTGTCGTTCCATCCGGTGTATTGACCTACTGT 2081632 30 100.0 36 .............................. ACGCACCAATTCAACATCCAGTTACGAAAGAATGGG 2081566 30 100.0 38 .............................. ATGAGAAGGAACTTGCCAAGTCTGTTCCTGGTTGGAAG 2081498 30 100.0 37 .............................. ATTAAAGTAGTTTCAAATACTCCAAGTGTAACAACAC 2081431 30 100.0 37 .............................. GATATAATATTTTTTATTTCCACCAGACCTTCAACGA 2081364 30 100.0 36 .............................. AAAAAATATTGCAAATTGTAAGGGGGGTAAATCCTT 2081298 30 100.0 37 .............................. ACTAAATAGATCAGAAGTTGACTTCTATTTTCTAATC 2081231 30 100.0 37 .............................. GAAACAGGAAACCAGTCAACAACTGGTACGTATATGA 2081164 30 100.0 38 .............................. TAAATAGCTGGATTGAATATTTGCACCCAAAATTGGGA 2081096 30 100.0 36 .............................. TCATTATTCTCCCATCTAGTCAATCTCTCAAACATC 2081030 30 100.0 37 .............................. ATTCTTTGGATGAAGGGATTTCCCCACTTCTAATATC 2080963 30 100.0 37 .............................. TCCAGTCTGGAATAATCAAATATAGAAGTGTTAATAC 2080896 30 100.0 36 .............................. ATAAGCTATAACAGCTTTTTTAATAAGCTATAACAG 2080830 30 100.0 37 .............................. AGCAAAAATATGGTAAAAATTAATTGGATATAAAAAA 2080763 30 100.0 38 .............................. AAGATGTAATAAAAAATCTCTTTCGTGGAAATTTTTCA 2080695 30 100.0 37 .............................. TAAGAGGATCTAAGGCATATAGCTTTAGAAAAAGTGA 2080628 30 100.0 38 .............................. TGCTGTGTGGTTAGTAATTAAGTCCTACATACCAACAA 2080560 30 100.0 35 .............................. TATACAATAGTCTCATTCTGACTATATCTATATAC 2080495 30 100.0 37 .............................. ATAAAAGCGGCCATAACGCTATCAGAGTAGCCGCACC 2080428 30 100.0 37 .............................. TTTAAACTACTTTTGCTGAGGCCATACGCTGTATTTA 2080361 30 100.0 37 .............................. AGATATTTTGTTAAACCTTCTACTACAATAAAACTGC 2080294 30 100.0 38 .............................. CATGGCCACTATTTACAAATCCCGTCAGTGAATCGCTC 2080226 30 100.0 38 .............................. CCACATCCTGATGCTCAGGATGATGATGACGACTCAAC 2080158 30 100.0 38 .............................. AACTTTTGGGGGGTGTATTTTCTTGCTTAGGATATTTG 2080090 30 100.0 36 .............................. ATCTTTTCTAGAACATAATCACTTGCTGATATGATT 2080024 30 100.0 36 .............................. GAGAAAGTTATGATACATATAAAAAAGTGCAAGAGA 2079958 30 100.0 37 .............................. ATACTCATTATATTCATCTATATAGCAGGCTCTAAAT 2079891 30 100.0 37 .............................. CCTGAAAAGAAAAAAGGAATAACGCCAACACCGCCCG 2079824 30 100.0 37 .............................. TAGCATCACTTTCAGAAGTTTTCACGCAGGACATTGA 2079757 30 100.0 37 .............................. TAGCATCACTTTCAGAAGTTTTCACGCAGGACATTGA 2079690 30 100.0 38 .............................. AAAATCGCCAATAGTCCAGAAATCAACCCACGATATAG 2079622 30 100.0 36 .............................. ATTCTCTTGTGACATATTTGTGACATTTAAAGTTTT 2079556 30 100.0 37 .............................. TTCCGTGTTGGGCTTCTATAATTGCAACTTTATCATC 2079489 30 100.0 36 .............................. GAGAGCCAAGCCTGATTGCAAATGTATACAACGCTG 2079423 30 100.0 35 .............................. TGGTTGTGCTTTTGATCCAACAGGGACGTATCTAG 2079358 30 100.0 38 .............................. CGCAGATATTACAGGCGGTATTACCACCTCTGATAGAG 2079290 30 100.0 36 .............................. TGATAGAACTTCCTAATCATGGATATATTTTCCATT 2079224 30 100.0 38 .............................. TCATTCTTGCAAATCTGAATTAAACCTTTTAAATAACT 2079156 30 100.0 38 .............................. ACCTTTTTTCTGTCACTTAGAAAAAAGCTAAAGTTAAA 2079088 30 100.0 37 .............................. CTAGGAAGTGTAATAGTAGCAATGTAACAGTGCAGGC 2079021 30 100.0 36 .............................. TTTTACGAGAAGTTCCTTCTCCTTCACCGGCAACAA 2078955 30 100.0 36 .............................. CCATCAGTGCCATTATAACTATGCCGAATATGCCAC 2078889 30 100.0 36 .............................. GAGTGCCATATTTTTACGAAAATTTTTGAATATCTT 2078823 30 100.0 36 .............................. AAACAGGAAAAACACAAGAAGAATTATTAAAACTAA 2078757 30 100.0 37 .............................. GCTATTGTAACTTCCCCTTCTGCAATCTTTCCCATAG 2078690 30 100.0 36 .............................. GGGGTATCCGCCGGAATAATCCCGTTCACAAACTGT 2078624 30 100.0 38 .............................. GTGGATGTTCGTTTTCCTTGTATGTATAGTCCATACCC 2078556 30 100.0 36 .............................. TCTAATTTTTCATCATTTTTATCACGATTATTTTTA 2078490 30 100.0 37 .............................. CAGCTTCATTTAAAACATCGAATATGTTTTCATATGG 2078423 30 100.0 37 .............................. CGGTACACCCTGCAACCCCTCATGTCTCTAGACATTT 2078356 30 100.0 37 .............................. AGAATAACTAAAAAATCGGGTAAATGGATAGCACAAA 2078289 30 100.0 37 .............................. TAACAAACCCGCCCACATAATTCAAGTTTTCTGATTA 2078222 30 100.0 37 .............................. AAATTAGTAAACCAAGGCGCATTTTTATGCGCCGATG 2078155 30 100.0 38 .............................. ATCTATGTTCTCTGTCATGTGTTGTACCAAACATTTTT 2078087 30 100.0 37 .............................. CCGAAGAAGGATACCAGCATCCGTAGAGCATTCATCC 2078020 30 100.0 36 .............................. GTTGCTTGCGATTACCTCAGCGTCGCTGACATCTCC 2077954 30 100.0 37 .............................. CTACTACTGCTGATGTGGTTGCCAAATTAGGACTAAG 2077887 30 100.0 37 .............................. ACAACCTCCTTATTTTTTAAAATATGTTTTTTTGTGT 2077820 30 100.0 35 .............................. CCCGGTTTATGCTGGAACTGTACCCACCGGTCATG 2077755 30 100.0 38 .............................. TATCCAAAATTTGTTATAATTAGACACTTTGGGTATTT 2077687 30 100.0 36 .............................. GTGAACGGTTCAAAACTGCTGAACTGTTTGGGAAGC 2077621 30 100.0 35 .............................. AGTCTTGGCTGTAGGCTGTGTTTATGTATAATAAT 2077556 30 100.0 37 .............................. TCATATTGCAATAATCAATATTCAATGCTTCAAACCA 2077489 30 100.0 37 .............................. AGGTTCTGGGAAGACGAATTGACAGAAGACCGAATTG 2077422 30 100.0 37 .............................. CGTCCTCCCACTTCTGCAATTTGGAATACTCTTTTTT 2077355 30 100.0 37 .............................. AGTAGTTCTGCCACGTCAAAGGAGTTGATACCTAGTG 2077288 30 100.0 37 .............................. GTCAAAGGCAACATCTACGAAAACCCTGAACTATTTG 2077221 30 100.0 36 .............................. AAAGCCATTGCGGAAAAGGAGGATGAATAATGAAGC 2077155 30 100.0 38 .............................. TGACCTTTTGTTCTATTTTAAGTAGTTTTTTTGTTATA 2077087 30 100.0 35 .............................. AAATAAATGTTTTTCCTAGTTCATTACGTCTTAAA 2077022 30 100.0 36 .............................. TGGGCGTGTGTAGGAATAGAGAAGCACATGACCCAA 2076956 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 103 30 100.0 37 GTTTTTACAGTACCTATGAGGAATTGAAAC # Left flank : TGAAAGGAGAAATGCAAAACTTTTAAAAATAGGACGGAAGTACTTGCACTGGGTTCAAAACTCTGTTTTTGAAGGTGAAATAACAGAAGCAAACTATTTCAAGCTTAAGGCTGAAGTTAAGCAAAGAATACATGATACTGAAGACTCTGTTGTCTTTTACACTTTCAGGTCGACCAGATATACAAACCGAGAAATATTAGGCAAAAAAATCGATCCAGGTAATCTTATCCTGTAATAGTTGAATTTTGAATTTATGTTTTCAGCTACTTACATAGATTTTATGTTATAATTTAGATATAAATTTTGAAACAGTTTAAAAAAATCTATTTAAAAAATTGTCGATGTCCGATAGCGTAAAAAACCCGGGAGGTCGACAACTTTTATATTTTTATGTCAAATGCAGTTTCTTTCCGGCTTTGCAGTTTTTTCTCCTGCCTTACTTGACTTATTATATTACATGAGGTTAAAATATGAATGTAGGCATCATGCGGTGCCTACGG # Right flank : CTAGATGTCAGGTAGAAAGAAAACAAATAGACAATATGTTTTTACTGTTGTTGTCAATAATAATTGGTTCTTTCCATAGTTAGTTGAATAACCTCATTTTTTCAAGCTGGAGAATTTTGGTTTTTAATGTTTCAAAACTACAACGGCCATACATAATTCGTTTTATTACCTTTAGTTTATTAATACACCCTTCTACAAGCCCATTACTATATTCATATTTTATCGCATTCCTTACAGCCTCCATATCTCGTTCAACTCCATTCATAAAACTGTTTATTTCCGGTATGTTTAGATTTTTAGCCCGCTCTATCCATTTATCGAAGGCTTCAATATTTTTATTAGTTAGCATATCCTTAAATTCCCATGTTATTTTATATATTTTTTCAAAAAACGGATATTCTTTGCATATCATTTCAAATTGTTTCTCACTGATTATTTTTACTTTTTCTATTGGGTGGTACAATAGCTTAAATATATTTTCTCTTTTTATTATTTCTGTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTACAGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 2111102-2103418 **** Predicted by CRISPRDetect 2.4 *** >NZ_NEMB01000003.1 Acetivibrio saccincola strain A7 contig00000, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 2111101 30 100.0 38 .............................. AAGCCTTCTGGTAAGCTGGTTGCCCCCTCAGGGAGCCT 2111033 30 100.0 38 .............................. CTAATAATTTTTGTTTTTATATCTTTTTCTTTGCCTGT 2110965 30 100.0 37 .............................. AAAAATAAATACGCAACTCAAGCTTTGTATGCTATAG 2110898 30 100.0 37 .............................. TCTTTTGCGTCCCAAGGTAAATCAGTTATATTTTCTA 2110831 30 100.0 37 .............................. GTAAAAAAATAATAATTTTTTTCATTAGAACGCCCCC 2110764 30 100.0 37 .............................. CTTTGTTAAAGTGAGTTAAGGGGGGATTTCCTCCCCC 2110697 30 100.0 36 .............................. TGCTGTGGGTCATGCAGACACAGCGGCGGTGCTCCA 2110631 30 100.0 36 .............................. CAAAAAATGAGGTAACAGGCACAGTAATTGGAAGGG 2110565 30 100.0 38 .............................. CCTATATAAATGCCTACATGTCCTTTATAATATACCGC 2110497 30 100.0 35 .............................. TTTTTTTTGCAATTCCTTGTAACCCTGCTTTGCTG 2110432 30 100.0 38 .............................. GTGTAGTAAATAGTACCTTCTGTTGCATCTCTTTTTCC 2110364 30 100.0 36 .............................. GGTCTATATAATATTCTTTGGAGTAGTGGAAGCCTG 2110298 30 100.0 36 .............................. ATAAAACAAGAAAGTTTCAGTGTGCTAAATGAATTG 2110232 30 100.0 37 .............................. CGCCTAATCCACCACGCACATTTCTAGCATAAAAAGC 2110165 30 100.0 36 .............................. ATACAGAGCTTTGCGGTATTGTCCATGGCGTGGTTG 2110099 30 100.0 37 .............................. AGCTCATCGTAAAAAGGGATAAATTCGGGTATGAATC 2110032 30 100.0 37 .............................. TGATACGTGGACTGTTATCATGAGCCACAGCTAGATA 2109965 30 100.0 37 .............................. ATGGGTCTGACAGTTTCGTAAATGTATCCCCACTTCG 2109898 30 100.0 36 .............................. AAAGCATTAGATATTACACCATTTTTATTTAGCTCA 2109832 30 100.0 37 .............................. CCCTTTATAACCAGAACTTCTTTCCCTTCTGCACCCT 2109765 30 100.0 37 .............................. GTTAAAACAAGTAACCCAAGGCGAAGAATAGACGGTG 2109698 30 100.0 38 .............................. GGGATAGTATTGGCGATTTTGTTTCTGAAAAATTTGGT 2109630 30 100.0 35 .............................. AAATGAAAATATGTTGCCAGGGGTTCTGCCCCTGG 2109565 30 100.0 37 .............................. TAATGGAATTAATAAAATTAAAACATAAAATAGCAAT 2109498 30 100.0 36 .............................. ATAACAAGCCATACGGCATAAAAAATCCTAAAAGTA 2109432 30 100.0 36 .............................. AAAGAAAATGGAGAGTATGTGAACATAGCTGACCTC 2109366 30 100.0 37 .............................. CTGTTATAGAATGTAAATAATTTGCCTTTTTGGATAT 2109299 30 100.0 37 .............................. TAGAACCTAGTATTTGTAATGGTCTATCTGATAAATT 2109232 30 100.0 37 .............................. TATATAAATCATCCGATATGTCAGCGAATATCCTTTC 2109165 30 100.0 37 .............................. GACGCTGATTTAAATTGGAATGAAGAAAAACGACAAG 2109098 30 100.0 36 .............................. AAGGGTATAGCTTGGGCGGCCTTGAAACCTATTTTC 2109032 30 100.0 36 .............................. CTATGTCGTCACAATATTCATTGTAACGACTTAAAT 2108966 30 100.0 37 .............................. AAACAGCAAGCAAAGAAAATGCGGAGTTTCTATACTT 2108899 30 100.0 38 .............................. ATAGATAAAACCCGCAAACATGAAATCGGAATTTTAAA 2108831 30 100.0 36 .............................. TAGAAATCGACCACTTCTAGCCGCCTTCCTGAGAGT 2108765 30 100.0 37 .............................. TAGGAAAGGATTTAGACGTGCAAACCTTGTTAGATTT 2108698 30 100.0 37 .............................. CTAGGATTATACTTATAGAACAAAGCATTAGAAAATA 2108631 30 100.0 37 .............................. CCTGAACTTACATTGTTTGATTTTGTTGCAGGTATTG 2108564 30 100.0 36 .............................. ACCAAATGAATTAAAAGCTGACTCCTATTATCGAAA 2108498 30 100.0 37 .............................. TATTTTTTGCTTTTTTCAATCCCCTAGAGACATAATA 2108431 30 100.0 39 .............................. GTTAGAAAAATTTGTACACAATCCTAGGAATTAAAGCTA 2108362 30 100.0 37 .............................. TTCTGTCATTGGTAGATTCTAGTAAATCCTCTAGTGC 2108295 30 100.0 36 .............................. TATTATAACTACCATCCCATAAATGTTGTTTACCCT 2108229 30 100.0 37 .............................. TTTCATTTTTATAAACCCCCTTAACTTCCTGAAATCG 2108162 30 100.0 36 .............................. ATACTAAATACATAAAATAATAAAACAAAAAAAACT 2108096 30 100.0 37 .............................. GGCAAAGAAATGGGTATTGGTAGGTGTAGCGTAATTC 2108029 30 100.0 37 .............................. AACATTTGAACAATAAAATGAACAATAAAAGGCACTT 2107962 30 100.0 38 .............................. CTGTTGTTTATTGAGACGGTACGCCCTTTCCAGAGAGG 2107894 30 100.0 37 .............................. TATTAAGTGTTTCAGATGGATTTAGATTCCAAGTTTG 2107827 30 100.0 37 .............................. TACGCTTTTAATTCTCCAGAATGAATAGCCTTGTAAA 2107760 30 100.0 36 .............................. TTTTTCTTTGGTGCTTCAACAAATATACATGGATTA 2107694 30 100.0 37 .............................. TCAGTATCTTCCGGTGTTTTGTATTTTCCTAGCCACA 2107627 30 100.0 39 .............................. TTTTTTTCTACAAAGGCAACTCCAAAGACGGCTACAAAG 2107558 30 100.0 37 .............................. CATGTCTAGGTAATACGCTACCCTGTTAAAATCTTTT 2107491 30 100.0 36 .............................. TACCATGTTCAGAAACCTCTGCCACCCCATATCTAG 2107425 30 100.0 36 .............................. TTGATTTAGCCATCTTGACTCCGCCCCCTCTTGTGA 2107359 30 100.0 36 .............................. ATGCTAACTGTGTTGCAACTTTTTCTTGAAGCATTT 2107293 30 100.0 37 .............................. CCAGGCCATTTTTCAGGTCCTCCTCATCCTGGGCGAC 2107226 30 100.0 36 .............................. AAACACAGCATGACGCTCAGGAACCGCTAGGTTTCC 2107160 30 100.0 36 .............................. CCACAAACCACGGTTCGCCGTCTTTCTCAATGACGC 2107094 30 100.0 37 .............................. AAGCAGCTTCAGCTTCTTTTTTGGTTCTACCACCAAC 2107027 30 100.0 37 .............................. ATGTTAAATACAGGATATACACCTAAGTTAGTTCCAG 2106960 30 100.0 36 .............................. TCTATAGCTATATGTCCTGAAGCTATAGACAAAATA 2106894 30 100.0 37 .............................. CTAATTCCATTATAACCCCTCCTATTTATTTTATATT 2106827 30 100.0 36 .............................. CAAGAAATACTTTTAGGGTTGTATATTCTGTATGGC 2106761 30 100.0 37 .............................. ACCTCTAGTAGTTGTGCAATTATTCTTATTTCTTTAT 2106694 30 100.0 36 .............................. AAGTTTTTTGTATTGCTTCTCCAAGTAATTCATCAG 2106628 30 100.0 36 .............................. TCTTGACATGGGGCTTGGTAAAACTTTTGTTGGTGC 2106562 30 100.0 38 .............................. GGATATTTGTATTAACAATACTAGGAATTGTTATATAC 2106494 30 100.0 35 .............................. TCTGCTGTCTTGTCTGTTTCGGCTTTGTAAAGTGG 2106429 30 100.0 35 .............................. GAAATGGTGGTATAGGCAAACCAATTATCGCCGCA 2106364 30 100.0 36 .............................. AATCAAGAAGCTATTAAGAAAATTCAGGATGCGGCT 2106298 30 100.0 36 .............................. GGTAAAGCTTCTATTTTGTCAATATAACGCATTTTG 2106232 30 100.0 38 .............................. ATATTTGACCAGTTTCCCAGTCGACTTGATTTACATGT 2106164 30 100.0 37 .............................. ATCCTATGGCTATTGGAGGGTTGCAAAACAGTTCTTA 2106097 30 100.0 38 .............................. ATTTGCTAATGTAGCGACTAAATCATCTGAATACATTC 2106029 30 100.0 38 .............................. AAGCTTCTCTCTCCACAAGATCAATGCGGAGCTTCTTG 2105961 30 100.0 37 .............................. TGGTATGATCGTTCCTGTCCTCAGGTTCATACTTATC 2105894 30 100.0 36 .............................. GTAGAAAAGTTGGATGAAATAAACCTAGGAAGCATG 2105828 30 100.0 36 .............................. TTGCGTATAACATAATAAATCACCTCTACTCTTCAA 2105762 30 100.0 38 .............................. CGCGGTATTTCTTCATGTAAACTACGTTTCTTTTTACG 2105694 30 100.0 36 .............................. AAGTTTGTACCCCGTATTGTCCCTGAACTACTTCTA 2105628 30 100.0 37 .............................. CCATAATTTCATTTAATTCTTTAGCAACTTCTTGTTT 2105561 30 100.0 37 .............................. GGTATTGACGCAGGAAGCAAACATATAGGTATAGCAG 2105494 30 100.0 35 .............................. TCACGTACGGTGTGGAGCGGGGGAAAATCTGGAGA 2105429 30 100.0 35 .............................. TGCCAAGCCAACATATTGGCGACACAATGAAGATG 2105364 30 100.0 37 .............................. TCAGTATCTTCCGGTGTTTTGTATTTTCCTAGCCACA 2105297 30 100.0 36 .............................. CACGTTTCAATAAGTCTAATAAGTTTTGCCTATCTT 2105231 30 96.7 37 ............................G. ATAACCTGAAAAATGCAAATTAAAATAAAAACCCTGA 2105164 30 100.0 36 .............................. TTTTTCCACCACCAGCAGGTCCATGCTGCAAGAAAG 2105098 30 100.0 37 .............................. GTACTTGACTCGAAGTGCACTTCATACCCCCTTTCTT 2105031 30 100.0 36 .............................. ATAATTTCCTTAAAAATTTAATACCTTTTTTATTGC 2104965 30 100.0 35 .............................. TTCTTCTTGAGATTTTTGTTTTTGTTTCTCAAAGT 2104900 30 100.0 37 .............................. AAGCTCTATGGTGACGAGGAAGATTCTGAGGAATAAC 2104833 30 100.0 36 .............................. GGCATTGGCATTATTTATTCACCACCCCTTGACAAA 2104767 30 100.0 37 .............................. ATGCAATTCAAAGGCCTGTATCTGTGGATGAAGGCAA 2104700 30 100.0 36 .............................. ACAAATGAGCTCGGTCAGTTCACCGTCTTTGTCATA 2104634 30 100.0 35 .............................. CTGGGTGAAATCATAGACGAGGTACGGAAATTGAG 2104569 30 100.0 36 .............................. TTCGTAACCAGCCCGTGCAACTCTCCACTATCATTG 2104503 30 100.0 34 .............................. CCCCCTTAGCCCGATTCTATTGTGTCCTCTACAG 2104439 30 100.0 36 .............................. TATTTCACTTTGTATTAAATACCGTAGGTGCTGTAT 2104373 30 100.0 38 .............................. TAGACGAATACGCCGACTTGGTTATACAAGATAAAAAG 2104305 30 100.0 36 .............................. TCACCTCCTTTAACCCCACTGAGTTTTCTCAAACTC 2104239 30 100.0 36 .............................. CAGGCTTCTGGGAAAGTCATCACATTTTGAAGACAA 2104173 30 100.0 36 .............................. TTCTATTATCTTCTTAACACCTTCTACCGTGTTCTT 2104107 30 100.0 36 .............................. CAGCTGAAATCCTGTAACCCTTGATTTTGGCGGAGA 2104041 30 100.0 37 .............................. TTACGTTTCTGAAAAACACCTTTTTCACGATTATCCC 2103974 30 100.0 36 .............................. TATTCCTCTTTGCTATACTCGCCAACCCCTAACATA 2103908 30 100.0 37 .............................. ACTTTTTTGTATTTCTCCAAAGACAACTACAAAGACA 2103841 30 100.0 36 .............................. TTTTTCCACTTCTGCTTCTTGGGGTGTACGGAATTT 2103775 30 100.0 36 .............................. GAAGAGCCACTTCCGTTTTGGCTGTCATCCTGCTTG 2103709 30 100.0 35 .............................. TGTCTGCCTGTCGTCTTTCATTTATGTCCTCGAAA 2103644 30 100.0 35 .............................. TGTCTGCCTGTCGTCTTTCATTTATGTCCTCGAAA 2103579 30 100.0 35 .............................. GCCATTTCTGTCCTCCTTTAGTTTAGGCGATTTGA 2103514 30 100.0 37 .............................. TGATATGAGGATGGTAAGTGTTGATGAGCTTGACTAA 2103447 30 86.7 0 .......................A..TG.T | ========== ====== ====== ====== ============================== ======================================= ================== 116 30 99.9 37 GTTTTTACAGTACCTATGAGGAATTGAAAC # Left flank : CAAATTCTAAAGTTTGAATTCTTTTTTCCAAATCTTCTACGATGCCGTTTATAGTGTTTATTGCTTCATTAAAGACGGTTTTTGTTTCTTCATCCTGTGATTTGACAGAGTATATCCCTAAAGTCCCCTGAATACCTTTTAAATTTGCTAAAGTTTGTTTAACTTGTGAAGCAACAGTCAATTTAATCAACCTCCAATTTTAAGTTTATTATTACACCAATTGTTATTTTTAATCCGTTATAATGTCAGGTAATTTTTCACATATACATTTCTGTTGTATAATAATTAGTGTAAGTGTAAATGTAGTTAAAGCACATAAATATATTTTTGAAAATTTGTCGATGTCCGATAGCGTAAAAAACCCCGGGGGTCGACAACTTTCATTTTTTTGCGTCAAATGCAGTTTCCTTCCGGCTTTGCAGTTTTTTCTCCTGCCTTACTTGACTTTTTATATTACATGAGGTTAAAATATGAATGTAGGCGTCATGCGATGCCTACGG # Right flank : GTGCTTGTTTCTACCCCACCTGGTGAGGTAGATGGATTATACTAAATATCACACAGCAGACATACTGTCCGCCTCTGGACTTTGAAAATTTTAAAAAAAAGTTGAAAAAGTGTGCAAACTTTTTCAACTTTAAAATATCCCTTAAAAATATATACTATGAAATGACAAAAAACCTGGAATAATTATAAAAACATACAATTACAATATTAACAAAGACCTACAATCTGATAAATTCACAAACTGAAAGCATTTTTTCCTTATTTATATTTTCAAGTTCAAAAAACAAATTCATATATTCTACAACTAAATCTTTAAATTCTTCAAATTTTTTCTTATCTATAAATTCATACCCGTGTGCAAAAATACTCTTATTTCTTAAATCCACTTTGTGTTTTAATCTGTTTAGCTGGGCTGTTTTTTTATTCTTTATAATATCATCACCTATAGCTGCAAGAAGTATATATCCTGCCATAAGACTCACCTTCTTGTCTAAATGCTCT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTACAGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.41 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 3 2336087-2328776 **** Predicted by CRISPRDetect 2.4 *** >NZ_NEMB01000003.1 Acetivibrio saccincola strain A7 contig00000, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2336086 30 100.0 35 .............................. TAGTATTAAAGAAAATGGAATAGAAGTTAGTACAG 2336021 30 100.0 36 .............................. TGCAACATTTATTTAATTTTAAATAGAGCTTAATGT 2335955 30 100.0 36 .............................. CGCCATTTGAAGCTCATTTGCCAATTTGTATATATC 2335889 30 100.0 37 .............................. TATATTTTTTTATTCTTGTTCTTTTGGGAATATTTTT 2335822 30 100.0 36 .............................. ACGTCATGTGGTGTGCAATTCACCACTTTAACATTA 2335756 30 100.0 36 .............................. TTTCTTGGAAGCCCATGCTCCCAAAGAAATTTCATA 2335690 30 100.0 37 .............................. GTGCATTTAACAATTTCACAACGGGCATTAGAGCATT 2335623 30 100.0 36 .............................. GAGAATTATTCTGATTCATCGGCTGCCAAATATATT 2335557 30 100.0 37 .............................. AGCTTAATTGCAAGTTCTATTGCTTTATCGTAACTTG 2335490 30 100.0 37 .............................. ACCGGCAGTACAATGAATCGTAATGGTGTCAATTTTA 2335423 30 100.0 37 .............................. ACATTTCTTCAACCTTTTTGTAAGTGTCATAACTTTC 2335356 30 100.0 37 .............................. GAATAATAATGATATAAATTTATATAATATATATATC 2335289 30 100.0 37 .............................. TTCCTAAATTTTCTTTTTTTTAAAAGTTATAATCTTT 2335222 30 100.0 37 .............................. GAGACTTGTTTTAAGTCTCCTGAAAAACCTTGTTTTA 2335155 30 100.0 37 .............................. TCCGATTGTCAACCTAAATTAACAAAATAGGTTGACA 2335088 30 100.0 37 .............................. CAGAAATAGAATATGGTATCGTGGAGACCCATCAGAG 2335021 30 100.0 37 .............................. CATCTCACCTGATATTGAAAAAAACCTTTTTCAAAGT 2334954 30 100.0 36 .............................. TTCTAATCTTTACAGGCTCTTTATCGGGTAAAGTTA 2334888 30 100.0 38 .............................. TTTGTGATAGCAACGTCACCGACAAAGTATGAATTTTC 2334820 30 100.0 37 .............................. GGATTCCTCCTACAATACCACCGACTATTCCTGAATC 2334753 30 100.0 36 .............................. ATTATCTTCCTTACGATGCAGAAGACAATGATTATA 2334687 30 100.0 36 .............................. AAAACCTCCTATTAGTTGATATTAATATTATATATC 2334621 30 100.0 37 .............................. CGGGTATCACAGCCGAACATTTTAGCGGTGTTCTAGA 2334554 30 100.0 37 .............................. TTTTACATAATTATTTATATTACTTCTGTCTATTTTA 2334487 30 100.0 36 .............................. GGTTAACAATCGAATAACAAGGCGGGGACGGGTAAA 2334421 30 100.0 37 .............................. TGATAGAACTTCCTAATCATGGACACATTTTCCATTG 2334354 30 100.0 36 .............................. GTGTAAATAAAAAAAGACGGCAAGCACAGGGATTCA 2334288 30 100.0 36 .............................. ACACAAAAAACAATATAACAGGAATATTTACTGTTA 2334222 30 100.0 36 .............................. TTAGCTGAGCCTCGGAGGGGGGGTTAGGGGGGGAGG 2334156 30 100.0 38 .............................. CTTCCTCAACCATATCTCCCATAGATTCACTTTCTATA 2334088 30 100.0 38 .............................. CCGGGAGTCGGTACAGGTAGGGGGAGTCCGTGTTCTGC 2334020 30 100.0 37 .............................. ATACTGTTTTTGATGAAATGTCAGTTTGTACTATTTG 2333953 30 100.0 37 .............................. TAGCATTTTGACTATAAATAAAAATATGGGTATGATA 2333886 30 100.0 37 .............................. ATAATATTTACTTTTGTTTCTTTTTCTTTTTCTGTTT 2333819 30 100.0 38 .............................. TCATAGAGTATAGATCCGCTAGATCATTTCTAGCGCCT 2333751 30 100.0 38 .............................. TTCCTTTTTTTCTTCTATTTCAAATTTAAAAGTTCCAT 2333683 30 100.0 38 .............................. CTGGATAGCTAAAGTCTGTCTCCCAGCCGTATAGACTG 2333615 30 100.0 38 .............................. CTGGATAGCTAAAGTCTGTCTCCCAGCCGTATAGACTG 2333547 30 100.0 37 .............................. TCGATAAAGGTCACAACTATCGATTCATTGGAAAAGT 2333480 30 100.0 37 .............................. AATAATCACTCATAATATAATCCTCCAATCTGTTTTA 2333413 30 100.0 37 .............................. TATAGAATTATTCATCCAATTGTAAAGGCTCTCCATA 2333346 30 100.0 37 .............................. GAGCCTCATCTTTCTTTCACCTCGCTTTCTTGACACT 2333279 30 100.0 37 .............................. TTGAAACTTCCAACAACAAAATAATCATCATCTTCTG 2333212 30 100.0 36 .............................. TGCACAAAAAACTGAAAACCACGCGGTATTTTCTTT 2333146 30 100.0 37 .............................. TCTTTTGCATTTTTAGCAAGTTCAATCACTTTATTAA 2333079 30 100.0 37 .............................. TTCCTTTTCTGCGTTTTCTAGTTCGATGGCTAATTGA 2333012 30 100.0 36 .............................. TCACCCTCTGGAACAAAATCGAGTTCTTCGAGTTTG 2332946 30 100.0 36 .............................. CGTGGTGAAGTATACGAATATACAAATAGAGGAGGT 2332880 30 100.0 37 .............................. TATGCTTCATATAGATAAAATAGAAAAAGTACGTCAG 2332813 30 100.0 36 .............................. TTCCTTTTTTTCTTCTATTTCCAATTTAAAAGAACC 2332747 30 100.0 36 .............................. TGATCATCAACCTTTCCCTCAACTACAAATTTTCCT 2332681 30 100.0 37 .............................. CCGTCTTCATCAACAACGATCTTTTCGATCTTCTTTG 2332614 30 100.0 38 .............................. AAATACTAACGTAAGCAGTATCATCGTATTGTCAACAC 2332546 30 100.0 38 .............................. ATAAGAAATCAATAATTTCTGATTTATTAATATCTACT 2332478 30 100.0 36 .............................. TTTGTAAAAGTCTGAATAATATTTCCATCTTTGTCC 2332412 30 100.0 37 .............................. ACTCCCTCCGGATAATGGAAGAATTTAATGTCAACAC 2332345 30 100.0 37 .............................. TTACATACTTGTAGGCTACTACGCCTCCAAGAACCGC 2332278 30 100.0 37 .............................. TAAGCTCAGTTGGTGTGCATCTAATGTATCTATAATT 2332211 30 100.0 35 .............................. CTAATAATCGTCCGTACACCTTTAGCAATGTTAGA 2332146 30 100.0 38 .............................. CATAGCAGATTTTGCAATAATAAACAATGACGGAACAA 2332078 30 100.0 36 .............................. CTTCTAATCGTTTATGACCATTTCTAGACATATCCT 2332012 30 100.0 36 .............................. TCATCTAATTTTATACTACCTGCTTTAGTTTTATAT 2331946 30 100.0 36 .............................. TCAATTCTTTAACGGTCATTTCTTTCCCTCCTTTCT 2331880 30 100.0 36 .............................. CAAAACTATGAATATGAACAGCAACAAAGATACATT 2331814 30 100.0 38 .............................. AAGTATAAATAGACCCTTTATTACGCGAAATTTACACC 2331746 30 100.0 37 .............................. CTTAAGTCTGATTTGTTTAGTTTGTAGACTTTTTGAG 2331679 30 100.0 38 .............................. GATAGTTCTGTTACAGCTAAGCCATCAATATCAACAAG 2331611 30 100.0 36 .............................. GCGCGTGCTATCCTGTTTTGGAGAGGGCGTACCTGC 2331545 30 100.0 38 .............................. CCTTCTGCAATAGCTGGTAAATGAGTTATATTCTCAAT 2331477 30 100.0 35 .............................. AACCAATTCTGTACTTCATCAAGGACGTTTACATA 2331412 30 100.0 38 .............................. AAACCTGATTCTGATAATAAAGCTTCTCATATACCAAA 2331344 30 100.0 37 .............................. GCATATGATACAAGGCAGTTGCCTTGGAAATTACCTG 2331277 30 100.0 37 .............................. TCTCTTTCACAAGAGCGTTATCCGCTCCGCATAGAAT 2331210 30 100.0 36 .............................. TCTGTGTAAGTTCTACCTGCGTCAGTTTTCTCTAAG 2331144 30 100.0 36 .............................. CCAGTGTTATAATTGTCGGTATTCTTCCAGTTTTTA 2331078 30 100.0 37 .............................. TGACTACCAAAATTATGATAGCCCGTATTGTAGTTAC 2331011 30 100.0 37 .............................. GACAATATGCACAAGCGCGTGGTGCGATATGGCACCT 2330944 30 100.0 36 .............................. TCTTTTGCATATGATACAAGAAAATTGCCTTGGTCT 2330878 30 100.0 38 .............................. GATCTCCATTTATAAACGCTATACCCATTTTAAATCCC 2330810 30 100.0 38 .............................. TATGCCCTAACAAAAGTAACACAACCAAATAAAGTAAA 2330742 30 100.0 36 .............................. TTCGAAATCTCTGGTGCTGTCAACAATCTCAAATTC 2330676 30 100.0 37 .............................. TGGAAACACTTTGGGATGAATATTATAGGTCTGACTT 2330609 30 100.0 38 .............................. CCGATGTTGTAACTTCCAGCATTGTAGCTGTTTATATT 2330541 30 100.0 36 .............................. TGTATTGCCATAGTGGCAATATATATACTATATAAA 2330475 30 100.0 37 .............................. TTCGCGAAACCATTTATAACCATATCCCTCTTTGTAT 2330408 30 100.0 36 .............................. AGCCATTTCTCTTTTTCTATCAGTTCTGGTTTCGTA 2330342 30 100.0 38 .............................. AGGGGTCAATTAACGAGGATATAACACAGCATCTTAAA 2330274 30 100.0 36 .............................. TTCTTATGTATCTTGGGTTCCTAACATCAACGGTTG 2330208 30 100.0 36 .............................. ACGAGGTTCGAGAACGACTTCTTTTTTATCAGCATA 2330142 30 100.0 37 .............................. CGCTCATCTTCTGGGAGTTGATTCAGTCATCATGATT 2330075 30 100.0 38 .............................. GGGATAACAAGATCATCCCTATTTTTACATGCGCCAGC 2330007 30 100.0 36 .............................. TGGTTCCTGGTTTAATCGTAAGTGCTTTTTCGATAG 2329941 30 100.0 36 .............................. CAAAGGCCATGAGTTCATCTTCGGCCTGCTTGCCGC 2329875 30 100.0 38 .............................. CTCTGCTCTTTCGTTAGCCGGCTTTGCTCTATTTTATC 2329807 30 100.0 36 .............................. TGGTATCATACCCTTCTGATTTTAGTTGCTTAAATA 2329741 30 100.0 38 .............................. CGGAGCTTAAGGCAAAAAATGGCATAGAAAGACCTCAT 2329673 30 100.0 37 .............................. ATAGTCAATTGCGGTTTTCCCGACACTTGAATAGTTG 2329606 30 100.0 37 .............................. ACATCGTATCAACCTCCATCATAATATTATTTTTACA 2329539 30 100.0 36 .............................. TTCACCGACTATCTGGGCCAGCGACATAGGAACCTT 2329473 30 100.0 38 .............................. CAGAACGGGCGAATCCGTTCCGATCGTGTATAATACCG 2329405 30 100.0 37 .............................. CCAGAATATTAAGACTGGGGCCGCCCATGATATTACT 2329338 30 100.0 37 .............................. TCGTCTGCGTCTAGTATTATTTTTTCTGCAAAAGGCA 2329271 30 100.0 36 .............................. GATGATAATATAAAATTAGATAATAATATAAGTGTT 2329205 30 100.0 36 .............................. TTTAACAACAGAATTGATAGGTCAAAATGGAAGAAG 2329139 30 100.0 38 .............................. TTCTGCGAACAGCGTTTCATAGACGGAATTTGTAAATA 2329071 30 100.0 36 .............................. TGGTATCATACCCTTCTGATTTTAGTTGCTTAAATA 2329005 30 100.0 36 .............................. TTTTAGGGGAAGGTTTTAACCTTCCCCTGCTAAATC 2328939 30 100.0 37 .............................. CTATACTCACGAAAAGGAGACCTATAGACTAGAAGAA 2328872 30 100.0 37 .............................. AGGAAAATATGTAAGAAATGCTATATAAAAAGAGTAA 2328805 30 76.7 0 ................CTGTA..G.....A | ========== ====== ====== ====== ============================== ====================================== ================== 110 30 99.8 37 GTTTTTATAGTACCTATAAGGAATTGAAAC # Left flank : GTATTTTTGATGCTGTAATGGAACTGCAATTTATTGATAGTCGCACAATTTCATCCTCAAGACGGCGGGTTTTCTTCGCTTTATAGGAGATAAAATCAAACCTTTCTGCAAAGGTAGTATGATTACAATCAGAATTATCACAAAAAAATTTTCTGTTACGTATAATAATAAATACCTTATTACCTTGTATTGGAAGGTCCTGAAAGGTTCTGTTATATGTGGAATGTATTCTGGATGATGGCCAGCCACAAAATGGGCATGTTACTTCTTTTCGATTGGAAGTTACTGTTATATAGCATTTGCCATCTTTTATTTCATGACTAATATAGTCTAAGTTTGGGTCTAATTGTTTAATAAATTCATCCATGGAATATAATCCTCTTTTCTTTTGTTTAATTTTCATTTATTTTATCATATATTGTCATTTAATTCAATTAACCCTGGAAAGAACCAATTAAATTTTACCACTGACAGTTTTCCAGTGAAAATATAGAAATTAG # Right flank : TATTTTTTCAAATTGCGGTAGGGTTAAAAATTTTTTTCACCTATTTTAATGTGATAAAATAAGGGTAGATTTACCTAAATTAAAATGAAAATCTACAGCATAGTAATTCACTTTACTTATGCTCCTTTCATCTCGTTTGTAACTTCACTGGCTATTTTATTAACATATTGAAGGTACTTTTCTTTTGCCTTTTTTATCATTTCATTCATTTCAGCTTGAAACTGTTCCCTTGCTTTTTCCATATCAGAGCATCTATAATTTCCATTTTTAATTTCATTAAATTTTTTTTCTTCAATTTTTGCATTTTCAATATGCATACACTCCTCATAACTGTAGCGTACATCTTCTCCTGCCATTTCTTCTAAAACATTTTCTGCTTTTATGATTTTTGCATCATGTCGCCCTAAATGGACAGGAGGTACAAAAACACCTTCATAAACATTCAGATTATTTCCTTCACTTTTGTGTTTGTCAATTTTTTCTTTAACTTTTCTCATATA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATAGTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.41 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 4 2343955-2340729 **** Predicted by CRISPRDetect 2.4 *** >NZ_NEMB01000003.1 Acetivibrio saccincola strain A7 contig00000, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2343954 30 100.0 35 .............................. AAATTATTTACACGAAGGGAGAGAGGATTTGGCAA 2343889 30 100.0 37 .............................. CAAAATAGGCTATGACAGTTGGAGCTCAACATATTTT 2343822 30 100.0 36 .............................. GCTGATTCCCGGGGGGGTACGGGGGGGGAAAGCCCC 2343756 30 100.0 37 .............................. TCTATAATGATGTGATTATTGATTTTATAAGGATCTA 2343689 30 100.0 36 .............................. TCAGTGGAACCAGTTCCAACCTGAGAAAAAGTTCTA 2343623 30 100.0 38 .............................. ACATCACCCTTCAACTGATTGGTCTGGTTCTGGGAACC 2343555 30 100.0 36 .............................. GCAGGATTTCTTTCAGATGCCTAATCAGCCACACGC 2343489 30 100.0 36 .............................. TGCTGATTAGCTCATTTCCACATAGGGCAATTATCA 2343423 30 100.0 38 .............................. GTGCTTTAGAATTGAGCTGCTCAAGCTCACCTTCCAAT 2343355 30 100.0 38 .............................. TTCCATAGGTACACATCAGCGACTTTCACAGGTGCAAG 2343287 30 100.0 36 .............................. TCCTTCATATTTCTCAAGGAATTCCAATAATGCAGC 2343221 30 100.0 36 .............................. GTTGGAGTCCTGAATAGTTCAACGCAAAAATGTTGG 2343155 30 100.0 37 .............................. TTTGTTATCATGTCATCGGTGCAATAGATATGATTAT 2343088 30 100.0 38 .............................. TTTAAGAGCAGGATATAAAGTAAAAACAGATGGTGCAG 2343020 30 100.0 36 .............................. TTTGGTTGGCAAGTTTTCTTTTGTTACTTTTTCAAA 2342954 30 100.0 37 .............................. TAGGCTCACCTAATGTAGAAAAATCGGCGAACGTTTC 2342887 30 100.0 37 .............................. TCAAAAATGCACAAGGATGATACTGTATGCATCAGAG 2342820 30 100.0 37 .............................. TATAGCGCTCTTTGTTTTGGTTCATATGTTCCTGTAC 2342753 30 100.0 36 .............................. CATTAGTAGTAGGAAAAGAAGGACATATATTAGGTC 2342687 30 100.0 37 .............................. TAGAATTCTCTGTCGGTTCTCTGTCTATACATACAAC 2342620 30 100.0 36 .............................. ATGGAAGATAAATACCTTCAACAAGTAATGACTTTC 2342554 30 100.0 37 .............................. TCTACCATTTCACCTGGTAAACCACTATGAAATTTCC 2342487 30 100.0 36 .............................. ATTGAACCAATTTGTAAAATCGTCTTGCTCACTGGC 2342421 30 100.0 35 .............................. TACTTTGACTTTTTGACCGGATTCAAAATAAGTCC 2342356 30 100.0 36 .............................. TAGGTCCAGGTTCTACGATGTAAAATTCGCCTGAAA 2342290 30 100.0 36 .............................. AAATCCATTCGTCATAATCCAGCCACACATTCACTA 2342224 30 100.0 36 .............................. CTGAGAAATCTCAGTCATCATCTCGGGAGGAAAATT 2342158 30 100.0 37 .............................. TTTCCAATCCATTCTGAAATCATCAAGACATAATCTA 2342091 30 100.0 36 .............................. AAAAATATTAAAGGAGGTATAAGGATGCGATTTTGT 2342025 30 100.0 36 .............................. GCACATGGCCAAATCAAACATCGGGCGAGTCTAAGT 2341959 30 100.0 37 .............................. ACAACATTGCAACGCCTATCTCTTTCCTTGTCATAAA 2341892 30 100.0 37 .............................. AACTCTTCACTAAACCAACTGCCTTTTGTGTCATAGT 2341825 30 100.0 37 .............................. GAAGAAGAGAAAACCTGAACCCGCTGGCCCCGGTCCG 2341758 30 100.0 36 .............................. TCGGTGAGGGTAGGTATGATGAGGCAGTTATACCAC 2341692 30 100.0 37 .............................. GTATCATAGTATTTAATATTAGCATTGTTATATAAAT 2341625 30 100.0 37 .............................. TCTCTATGAGATAACCATTCGTCATAATAAAGCCAGA 2341558 30 100.0 37 .............................. TCTTTTCTTTTTCTTCCCATTATTAAACCCACTTTTT 2341491 30 100.0 37 .............................. TTACCCAATCAGGCATGGAACGCCTGTATGGGAAAGA 2341424 30 100.0 37 .............................. ATATTGCCAGGGGCAGAACCCCTGGCAACATATATTC 2341357 30 100.0 37 .............................. AAACCCAAAAAGGAGAGAAAAGCATCACATTAATTCG 2341290 30 100.0 37 .............................. CACCATATTTCCCGTTACGATACTTGAAAAAATCCCT 2341223 30 100.0 35 .............................. GGGTCATCATAACGTACATAATTACCATCTGAATC 2341158 30 100.0 37 .............................. GGCGCATATGTTTTAACTTTTTTTTTCTCCAAAGACG 2341091 30 100.0 37 .............................. ATGTGACCAGTTTGTATTTGTTATCGGTGTATTTCTT 2341024 30 100.0 37 .............................. AAGTATGGCTATGAGCACTCCGAGCAAGTGAAAAAAA 2340957 30 100.0 36 .............................. AAAGAATCTACAATATATACGGTCTCAAAGTTAGTA 2340891 30 100.0 37 .............................. TAAATTCCATTTTCAAATGCAATATAATATTCACTAG 2340824 30 100.0 36 .............................. CTTCTGTTCTCACTCCTATCAGGTCGAAGAATCTCA 2340758 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 49 30 100.0 37 GTTTTTATAGTACCTATAAGGAATTGAAAC # Left flank : CCTTATTTCACAGTTACGGAAATATTCATCCATATCTTCAAGCACTTCTTTAAGTATATCGCGTCCAAGTTTAAATAAATCTTCTTTTAGACCAAGAACAAGATCAGCTAAGTCTTTTCCTTCTTCAATAAAATTTTTTATCTTTTTTTCAATTCTTTTTACCCCAAATTCATTAAAATGTTGTATACTATTATACATAGAAGATGTCATCCTTTCTATTTATTATTTTTGGTTAATTAATATCTTAACAGGATGTCATCTTCTTTTCAATTATATATGGTATTTTATGTCTCATTCCCTACAATAACTTTACGCTAACGTGTTTTTTATTAAATTGTCGATGTCCAATAGCGTAAAAAACCCGGGAGGTCGACAACAAATAAATTTGTGTGTTAAACCCGCTTCTGTTCTGGTATTGAAGTTTTTTGCCTTCCCAAGCTTGACTTTTTATATTACATGAGGTTAAAATATTGAATGTAGGCATCATGCAGTGTCTACGG # Right flank : TAAACACTGAGTTTTCCTGTTGTTGTCAATAATAATTCCCCAAAAAGGGGAAAGATTTTTCCCCACCTTAAAAAAGATAAAAAAATACTATCCAACAGAGAAAAAACTTTTTCAAGAATCCAGTTTACAACAAGCCTCCCCCATATGATTACATGCCAGTGAGGCCAGCCCACCATACCCCCGTAGGCATTCCTTTTAAGCTGGGCTGAGGGGTATGATAAACTGGCCTGCCTTAACAGGCTATCATATGGGACCCTTCTCATTATAAACCGCACTTAAAAAACTTTTTTCACGTTTTTAATATAGTTACGCGAATAAAATAAATATGTTTTTGTCAAAGAACAGCATCTTGCTAATTTTATTCATTGTTTTGTATTTTTGCGGATATAGCTTTAAGACTTTCCTTACTTTGCTTCATTCGATAGCTTTCACCTTTTATAACTACAAAATGACAATGATGAATAAACCTATCTAATATAGCTGTTGCCAAAACGGGATCG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATAGTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //