Array 1 2038-628 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAAAIU010000021.1 Legionella drozanskii LLAP-1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2037 28 100.0 32 ............................ AATATTATCAAGATTTTATGGAGAAAGCAGAT 1977 28 100.0 32 ............................ TGTTAATGAGCTAATTGAAGATGACTTTTTAC 1917 28 100.0 33 ............................ TTTTATAGTGTCAAATTACGGACCCGCTTGCTC 1856 28 100.0 32 ............................ AGGCGAGAAGAAGTACCCAATGCCTGATAAAA 1796 28 100.0 32 ............................ AACACCCAAGGCTTATTAGCTTATGATAAAGA 1736 28 100.0 32 ............................ CTTAAAATCATCTAACTTCATGCGCCGCCAAT 1676 28 100.0 32 ............................ TTGACCCAACATATGCCCCACATTACGGCCAA 1616 28 100.0 32 ............................ TACTAATAATTTGTAATCGCAGCGCTATGAGT 1556 28 100.0 32 ............................ CGAAAGCGATAAAGTAGTAATCGACTCAGTTA 1496 28 100.0 32 ............................ AAAGGCTAATATAGGATTAAGACCTGCTGCCT 1436 28 100.0 32 ............................ ACGCTGCCAAGCAGTCGAAGACATAATAGATT 1376 28 100.0 32 ............................ AATAATATGACCATGCTCTGTAAACGACTTAG 1316 28 100.0 32 ............................ GGTACTGTTATTCCCGGACAAACCGGAGCTCC 1256 28 100.0 32 ............................ TGTGAAGATTTATGACATTGCTAGTTGCAGGG 1196 28 100.0 32 ............................ TTTAAATTATCTCACTTGTTCGGGTCAATCGT 1136 28 96.4 32 ...........................G GATAGGTTTTGGAGTTTTAGAGCCGGTTTTAG 1076 28 100.0 32 ............................ ATTGCAAGGTCATCGCTTGAAAAAGTTAGGGT 1016 28 100.0 33 ............................ CAAGAGGAAATTGCAGGCCATCTAGGTATATGC 955 28 100.0 32 ............................ GCGAAACGGTCGGAATACGTATTTGTTGCAAT 895 28 100.0 32 ............................ CAACAACCCCGTTATTGCGAGCCTGGCATGCC 835 28 100.0 32 ............................ TGTTAACTTCTCGAATTGCTTCCCGGCGCAAA 775 28 100.0 32 ............................ TTTACATCATATGTCAATAAATGTTATTTATT 715 28 100.0 32 ............................ AATTAAACATATTTTACTTCTTTTTGCGTCGT G [698] 654 27 96.4 0 ........................-... | ========== ====== ====== ====== ============================ ================================= ================== 24 28 99.7 32 GTTAACTGCCGTATAGGCAGCTTAGAAA # Left flank : TGCTCGAGAAATTTAATGCAATAAAATGGTTAAATAATTTCTCTGATTATGCTCACATAACTGGAGCTCGTGATGTCCCGGGTAATATAACCAGCTATGTTCGTTTCAAACGAAAGCAATCGAAGTCTAATACTGAACGCATAGCTCGAAGAAAGGCAAAGCGCGAAGGGATTGATTTGGAGAGTGCGATGGGATTATTAAAAAATCATAAAGAATCATTAATACGTGCGCCATTTATAAAAATTTCGAGCCTAAGCTCCAAAAACACATTTAAGCTCTTTATTTATAAAGAACCCTCTGAGGAACTTATAAATAATGCATTCAGTTGTTATGGTTTAAGTTCTGTATCAACGCTACCTGACTTTTAACCTTTATTTTTGCTGTTCTTTAAAAATTTATTTAAATCAATAGGTTGCGATCATATAAAATATCAATGGTTACACATCGATATCTTATACTAGCTTATTGTTTATTAAATTGATTTTAAGTGTGAAATTTGG # Right flank : CAGGAAGATGATTACATTAAGTCGCTATAATGAAAAATATTATCCATCTTTATTATTGCAACGATAAAATTTATCACAGCATTCTTAAAATGAGCACATCATGATATGATTTACTCCTCATAAATTTTAGAAATTCTGTAATCTGGCTCAATATATGAAAGCAACCACCCCAATTTTCCTCCTATCGTTATTTGTTATATTTCTTTTTTTCCTTTTCTCAACCGTTTCTACTATTCCAGCCGGTTATGTAGGGGTACCGGTTCTTTTTGGGCGTGTCCAGACTGGCATTCTTGATCCAGGAATTCATTTCAAAAACCCATTCACTCGGGTAGTTAAGTTCGATTTGCGTACGTAAAAAGCTGACGAAGAAGGTGTGATACCAAGCAAAGAAATGCTTAATCTGACTCTTAAAACCTCGGTTAACTACCACCTCAATAAATCTAAAATTGGTGATATTTATAATAGCGTAGGCGTTGATTACTTCGATAAACTAATAGAAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTAACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //