Array 1 89408-86640 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSFM01000005.1 Lachnospira eligens strain AM43-40 AM43-40.Scaf5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================================================================= ================== 89407 30 96.7 38 ..........A................... GTAACACAGAACGATGCGACAGCATACGCAGCAGGCAC 89339 30 96.7 35 ..........A................... ATGCAGACTACTGGAAAGCTGGCTCAACAGACAGT 89274 30 96.7 34 ..........A................... GAATACGCTAATAAGTTAATAAATATTATTAATG 89210 30 96.7 34 ..........A................... AAGTACTCCAAACCGGCATATAAAACCCCTCCAA 89146 30 96.7 37 ..........A................... GAGAAGAAGAAAATGATAAGGCTTTAACGGAATCATG 89079 30 93.3 34 ..........A..............G.... AAAGATGATAGTGAGATTGTAATACCTCTTACTA 89015 30 96.7 35 ..........A................... GAAGAGAGCCGTAAAGAATACTAACGCTGCTTTAT 88950 30 96.7 35 ..........A................... GCACAAATAGCACACAGATATTATCCTGTATCAAA 88885 30 96.7 37 ..........A................... CACGCAACAGATATCAGCTATTATTAACGCTTCTATT 88818 30 96.7 35 ..........A................... TGCGGAACGGACAAGAGCGTTGTAGTTCCAGGACG 88753 30 96.7 36 ..........A................... ATATGATGCTTATACATAATCATCCAAGCGGATATC 88687 30 96.7 34 ..........A................... CCTGTAGCAATCGCCCCACCTACAGCCGCAACAG 88623 30 96.7 37 ..........A................... AATTATGCGGCGCATATTATTAGTATTATGTACGACT 88556 30 96.7 35 ..........A................... AGAATCTGTCAGAATGGGAGCCTCCGGCAAGGGGA 88491 30 96.7 35 ..........A................... TTATTATAATCCTCTTCATAATCAAAAGATTTACG 88426 30 96.7 34 ..........A................... TTTCCCCACTGCGGACCATTGTTTCAATTGCTGC 88362 30 93.3 36 ......T...A................... AACATTATTAACGGATTTAATTCGTCTGCTATTTCT 88296 30 96.7 35 ..........A................... TTGTTTGTTAGCGCGATCCTGATGAATCGTGTGCG 88231 30 100.0 36 .............................. TTAGTTACAATTCGGAAGATTTCCTTAAGGGGAAAT 88165 30 100.0 36 .............................. ATTAGAATATCACATAAAAGAAATGAAAAAATATTG 88099 30 100.0 34 .............................. ATATCAACAATAAGCTACAATTCAGAAGAGTTTT 88035 30 100.0 37 .............................. CATGAAAACAAGTAAACCTATATCAACAATAAGCTAC 87968 30 100.0 35 .............................. GATGATTCGGATTATTCGGATTATATGTTAGATGT 87903 30 100.0 36 .............................. TTATATAAAGTGTCTGTTTTCCTCCAGATGACTTCA 87837 30 100.0 34 .............................. TGGTGTGGTTCTCCTTTGTGTGTATAATGCAATA 87773 30 100.0 37 .............................. GAGGATGCACTTGTAATAGATATGACAAGTGAAGATT 87706 30 100.0 35 .............................. TAGTTTAGCGTGTGGTTATTGTGTTAATTACGCAG 87641 30 100.0 35 .............................. TATGGTATAGATGATTATGTAGTGGTATTAGCAAA 87576 30 100.0 35 .............................. CCAGTTGAATACTTAATACGCATATGCGAGTTTTT 87511 30 100.0 37 .............................. TATAGAATTAACGGAAGTAATGGAGTAACCGCAATCG 87444 30 100.0 36 .............................. ATGCATGAGTATAAAGATACTTGTGCAGCATTAAAT 87378 30 100.0 36 .............................. ACAGACTTGAAAGATAATTCCGCAAATGCTGATACT 87312 30 100.0 35 .............................. TGGTTTGAAAAAGAAACATGGGTTGACGCTGTTGA 87247 30 100.0 36 .............................. AAGTTAGACCAAGCGGCGCTCGTTTACGACGCTTTT 87181 30 100.0 36 .............................. CTTGGCAGTTTCAATCCTATCTCTATAGGAATCTCT 87115 30 100.0 36 .............................. TTTAATTTAGGCGAATTGTGCAATCCGTTAAAAATC 87049 30 100.0 35 .............................. GAAGGTAAATGGTACGGCGGTGTCCTGATGTGGGT 86984 30 100.0 35 .............................. GTCGATGTAATACTGCATGAAACTGTCTTTAAGTG 86919 30 100.0 36 .............................. AAATTTAACGGAACAGCGGCTAATAATGCCGTATAC 86853 30 100.0 89 .............................. GAGGATACGTGAGCATATAAGAAGAGCTGGACATCGTCGACAAATAACTATTTTGGTTTTGAGATTTAAAGCTGTATAAAAACTTACGG 86734 30 100.0 35 .............................. TTTATTGTAATATCTGCTTGTATCGGATTATCAAT 86669 30 90.0 0 .....................A..A....A | ========== ====== ====== ====== ============================== ========================================================================================= ================== 42 30 98.2 37 GAATTAATAGTTACATAGTGGGATGTAAAT # Left flank : AAAGCATTTAATAGGTGAGAAAGAATATGAAGGGTTTAGAATATGGTGGTAGTATATGTATATTGTACTTGTATATGATGTTAGTAAAGATGAAAATGGGCAAAAAAGATGGTCACATATTTTCAAAATCTGCAAAAAGTATCTGACGCATATTCAGAATTCTGTCTTTGAAGGAGAAATATCAACAGTTCAATTAGAAAAATTACGGGGTGAGTTGAAACCACATGTTAATACTAAGCTGGATTCAGTCATTTTATTCAAAAGCAGGAGTGAAAAATGGCTGGATAAAGAATTTTGGGGTAAGGAAGATGATTTGACGAGTTTCATAATTTGATTGTCGACCAAAAATAGTGTAAAATATGCACAGAGTCGACAATGGTGATATTGCTATGCTTCTGGCATATTCAGGGCATAAAGTATTAGTAATCTGTTGGCGGATTTAAAGGGTAGACAGAATAACGCTTCTGAGTTGAGAAACAGAGAGACTTTAATGATTACGG # Right flank : TGATACATGATAAAAGGTTTGATTATTCTTTCTTAAAGATGAACTATCAAACTGAATATGAGGTTATATTAATTTCTCATTTTCAAAGCTAGTTTATAAATCTATCGAGAATAAGAAATATTAATTCGATAATTAATACTATTTATGCATCAATCAAGTCTTAAATGTATCTTAGAGCCTTTTTTAACAGAGTTAATATTAATATAATGAATCGTAGATATGTAGTAGATTGTAAATTTAGTTTAGAATATGTAATTAATATAAGCAATCCCCTCCACGCAACCAACGCCACCACAATTCCCACTTTTCTGACAACTACAATTGGTGGAATCCACATTTTACATGGACTATAATACATACATAACAACAGAAAGGACTGACATTATGCTACAGGAGAATCTTATTATGCTGAGGTCGCTTGCGGGTAAGACGCAGGAGGATATCGCAGAGGTTATTGGAATATCGAGGCAGGCATATGCCAAATGGGAGCGTGGTGAAAC # Questionable array : NO Score: 2.92 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:-0.09, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAATTAATAGTTACATAGTGGGATGTAAAT # Alternate repeat : GAATTAATAGATACATAGTGGGATGTAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //