Array 1 194357-194690 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGGOI010000032.1 Streptomyces sp. ISL-1 ISL1_33, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 194357 29 93.1 32 ............T........T....... GAGAGTGCCATGGCCGGAATTTGGGCGAGACC 194418 29 93.1 32 ............T........T....... AAGCGCCTGGACATGAAGAAGGCGAAAGCCCA 194479 29 96.6 32 ............T................ TCGGCGCCCGCGGCGAGGTAGGCGGCCGCAGC 194540 29 100.0 32 ............................. TGCTGCCAGTCGTCCAGGACCAGCCCGGCCGA 194601 29 100.0 32 ............................. TCGCGCCGGTCCCGCGCCGCAGCACCGTCGGT 194662 29 96.6 0 ......................A...... | ========== ====== ====== ====== ============================= ================================ ================== 6 29 96.6 32 CTGCTCCCCGCGCCCGCGGGGATGGTCCC # Left flank : GTCGCCGCCGGACGCAACTACGGAGACGGCAGCGACGAGGACGAGGCGATGACCTGGTGACCGTGATCGTCCTCACCAACTGCCCTGCGGGGCTACGGGGTTTCCTCACCCGCTGGCTCCTGGAGATCTCCGCGGGAGTGTTCATCGGCAAGCCCTCCGCGAGAATCCGGGACGCCCTGTGGGAGGAAGTGCAGCAGTACGCGGGTCAAGGTCGCGCCCTGCTCGCTCACACGACCAGTAATGAGCAGGGCTTCACCTTCCGGACCCACGACCACGGCTGGAGCCCAGTCGACCATGAAGGCCTGACCCTGATCCGCCGCCCAAACGCCAACCCGACACCCTCGACGACCGCTCCGAAACCGGGCTGGAGCAAGGCGGCCAAACGACGTCGCTTCGGAAGGAGTTGAACGGATACTTTGTCGGCTTTCGTCGAGTTGTCGGAATTGGTGAAAGTACTCCAGGGCGGTGCGCACCCACGCTAAAGACGCAGCTCACGCAGT # Right flank : CTGCCACGGCATCACCCGGCGGGCGGCCAGGTGTACCCCCGCGGCCTTGTGGTCGATGCCTACGCGTCCGCCCGTCAACTTGGCACGGCACAGGCCCTGCTGCCACGCGCAGTACCCCTTACCCACGTCATGGATCAGACCGAGGTACCCGGCTAGCTCGCCGGCCCCGAACACGTCGGCAAAGTTGCGCGCGAGCGCGGCCGTATCTCGCAGATGATCAGCCAGTGCATGGCGGCGGCCCCGTCGATTGGCGCTATAGACAAACATGCGGAGAACAAGCTGCACCGGCGCCTGGCCGCCCCCATCGGAGAGGTGACGGCCAGTGCCTGTGGTTACAGCGTGGATGCCCCACCCTCGCGATGCGCGAGCGACGCCAGCTCGTGAATCAGGCGTTCCAGCGCTGCCATGTAGTGCCTGTAATCCTTGAGGAGATCGGTGTCTTCCTGGCTCTGGGGGCGGATGTCCTCAAGGCTGCGGGCGAGGTTCTCCACAGCCAGGAC # Questionable array : NO Score: 5.78 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCCCGCGGGGATGGTCCC # Alternate repeat : CTGCTCCCCGCGTCCGCGGGGTTGGTCCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [41.7-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 203963-204677 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGGOI010000032.1 Streptomyces sp. ISL-1 ISL1_33, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================ ================== 203963 29 96.6 32 ............................G GTCGCGCTCCTCCTGGTCGGCGGCGAACGCGG 204024 29 100.0 32 ............................. CGCATCGCCCTCGACGAGGACGCCGACGTCAA 204085 29 100.0 32 ............................. GCTGGAGACGCTGCGGGAGAAGGATGCCGAGA 204146 29 100.0 32 ............................. GCCAGCAGCCTGGCCACCTCTTGGGTGACGTT 204207 29 100.0 32 ............................. TCCGCACTCAGGCGCCGACCGCGATGCGTGCC 204268 29 100.0 32 ............................. ATCACGCGGGCCGGGTCGCTCGCCACGTCGGC 204329 29 96.6 32 ............................T GAAAGTGGCGGCCGGCGGATGGAACGTGACCC 204390 29 100.0 32 ............................. AAGAACGGGGCCACCCGGACCGGGCCTGGTCC 204451 29 96.6 31 ............................A CCTCGGCGTTCGTAACGCTGCCCCGGCTGGT 204511 29 100.0 32 ............................. CGCGATCCGCTAGAGAACAGTGACGCCCAGTG 204572 29 100.0 48 ............................. GCGGCTCCGCACCACGGAATCCGAGCGCGTGATCGTCGAGCGCATCCA 204649 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================================ ================== 12 29 99.2 33 CTGCTCCCCGCGCCCGCGGGGATGGTCCC # Left flank : TCTGCGCGGACCCTGTCCACCCTCAATAGTTCGTGAGTCCTCAACGGCCTTACCTGGTGATCGTGATCGTCCTTACCAACTGCCCTGCGGGGCTGCGGGGTTTCCTCACCCGCTGGCTCCTGGAGATCTCCGCGGGAGTGTTCATCGGCAACCCCTCCGCGAGAATCCGCGACGCCCTGTGGGAGGGAGTGCAGCAGTACGCGGGTCAAGGCCGCGCCCTGCTCACTCACACGACCAGTAATGAGCAGGGCTTCACCTTCCGGACCCACGACCACAGCTGGAGCCCAGTCGACCATGAAGGCCTGACCCTGATCCGCCGCCCAAACGCCAACCTGACACCGTCGACGACCGCTCCGAAAGCGGGCTGGAGCAAGGCGGCCAAACGACGTCGCTTCGGAAGGAGTTGAACGGATACTTTGTCGGCTTTCGTCGAGTTGTCGGAATTGGTGAAAGTACTCCAGGGCGGTGTGCACCCACGCTAAAGACGCAGCTCACGCAGT # Right flank : CTGGAGTGCAACACCGTCGAACGGCCGGTCCCGGGACTACCTGCGGCGACGCCTGACCGAGGGCAAGACACGACGTGATTTCATCCGCTGCCTCAAGCGCTACGTCGCACGAGAGATCTACCGGCTCATCGTCCCAGCGAGCACTACGGCTGACCAGGCAGGACGCCCTGGAGTCGCTGCTTGACATCCATCGGGGCATCAAGCGTGGCTACGTCTTCCTCGGCACAGTCATCGCCATAGGGCTCCGCTCGGGATCGACCGACCAGAACCTAGCTGCCGCGGGTTACGCCCGGCGCAGCGCCACGAACGTGCGCCCCGCCACCGCCCACTGGTCCGCCTCGTCCGTCGCCCAACCCGCGAAGCGCGCGTAGTCGAGCAGCGCGGGGGTGCCGACGCGGGCCCAGGGGAAGGCCGAGCCCTGGGCGCTGCCGCCGTCGAAGACGCGTACCTGTACGCGCTCGTCCACATCAAGCGGGGAGGTCTCGGCCAGCAGCACACCG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [43.3-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 66088-65912 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGGOI010000017.1 Streptomyces sp. ISL-1 ISL1_18, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ============================================== ================== 66087 32 100.0 46 ................................ ACCCCGGGGAACCGCCCACCGGGCAGCGACCGTCAACGCCCCGCGT 66009 32 96.9 34 ............................C... ACCCCGGGTGACCGCCCGCCGGGACGCCCCGGGC 65943 32 96.9 0 ....................C........... | ========== ====== ====== ====== ================================ ============================================== ================== 3 32 97.9 40 CCGCGGCGACCACGGAACCCGGCACGAGTCGT # Left flank : AGGCCGCGGCTGGCCGAATACGCGCAGAAGACGCTGAACCAGATCGGCAGGCTGCGGGGCAACTGACCGCCGGAGCAACCGCGCAAGCTGGGGGAGTCTCGTGAACAGCACACCGCACGGACGGAACACGTCAGGCACGTCGCCCGGGCCGGTCACGGCAGCCGGGTCCGACGCGGCGCGCGGACAGGAAACACCGCGCTCGCCTCTGTTCGCCGAGATCCAGGTCACCGAGCTGGACCTGGAAGCTCCCGACGGAGCCGTGCTCAGCTTCGGCCCCGCGCCGGGCGGCGGCCCGGCCGTCCGGAGCGGCGACGTCTACGCCCTGGTGCGCCTCCGCGGCCGTCCCGTCGCCACTGTCATGTGCCGCGTCCCGCCCGGCAAAGCGCCTGCCGACGCCGTCGCCGCGGCGGCCCGCGCAGCGCTCGCGAGCAGTGAGCCGCCCGCCTCCCGCGGCGCCCCGGGTGACCACCCGCCGGGCAGCGACCGTCCGCGCCCTGGGC # Right flank : GCGAGCGTTGTCGTCGCCACCCGCGAGCGCGCCGACCAGCTGGCCCGCGCGCTCGACTCGCTGCTGGAGCAGGACCACCCGGACTTCGAGATCGTCGTCGTCGACAACGCGCCCGCCACCAGTGCCACCCAGGATCTCGTCGAGCACAAGTACGCCGAGCGCGTCCGGTACGTCCGCGAGCCCGTGCCCGGCCTCGCCGTCGCCCACAACCGAGGGATCGCCGTCGCGGACGGCGCGGTCGTCGCCTTCACGGACGACGACGTCGTGGCCGATCCGCACTGGCTCACCGCGCTCACCGCGCCCTTCGCCGCCGACCCGGGCCTGGGCTGCGCGACCGGGCTGATCCTGCCTGCCAGGCTGCGCACTCCCGCGCAGATCCTCCTGGAGAGCCACGGCGGCTTCGCCAAGGGCTTCGAGGCGCGGCTCTACGACCCGGCGCGCCCGCCCGCGGACGAACCGCTCTTCCCGTTCACCGCGGGCAGCTTCGGCTCCGGCGCCAA # Questionable array : NO Score: 2.57 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGCGGCGACCACGGAACCCGGCACGAGTCGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.40,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [21.7-13.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //