Array 1 182166-183214 **** Predicted by CRISPRDetect 2.4 *** >NZ_RXWK01000015.1 Pseudomonas aeruginosa strain MRSN12283 MRSN12283_contig00015, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 182166 28 100.0 32 ............................ GCCTGGCCCGCTGGTGGGCGACTGGCGCGACC 182226 28 100.0 32 ............................ ACCGACGTATGCCAGCGGCAACAGCACGCGAG 182286 28 100.0 32 ............................ TGGGCGTGCTGATTGTTGTGGCGGCAAGTATT 182346 28 100.0 32 ............................ CGGATCAGGCATCACGCACGTCGTGCCGGACC 182406 28 100.0 32 ............................ TTGTCGCTGACGTCACCCAGCATCACCAGGGC 182466 28 100.0 32 ............................ GTGGCGTTCAATTGTGATGTCGTGCTGCTGCC 182526 28 100.0 32 ............................ TGTTGCGCGGCCAGCGCGGTGTTGACCTGCTC 182586 28 100.0 32 ............................ GAACCGCGCGTTCATTGCTGAAGGCCATCGTC 182646 28 100.0 33 ............................ ACATCAGCGCCGCGGTAGCCGATGCCGATATCT 182707 28 100.0 32 ............................ TGATGCCGGACATGGGACGTTTCGCGGGAACC 182767 28 100.0 32 ............................ AGAATGGCCTCCAGCCCCAGCGAATGGCCTGG 182827 28 100.0 32 ............................ GCGGAATCATCTCGCCGGCCGTCTTCGTGCTC 182887 28 100.0 32 ............................ TTTCCCCGCGAGGCATAGCAGGGATATCTTGT 182947 28 100.0 32 ............................ TACAAGCAGATCGGCGAGCTGAGCGGCAAGGA 183007 28 100.0 32 ............................ GGCAATCGCCGCGTCGATATCTTCCGGGGTCA 183067 28 100.0 32 ............................ CAAGGTCGTCACCAGTACTTCTTGGGGCGGGC 183127 28 100.0 32 ............................ TTCGACGCCGCTAGGGTTGCCGCATCGCCGTC 183187 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 18 28 100.0 32 GTTCACTGCCGTGTAGGCAGCTAAGAAA # Left flank : GACATGTGTCCGCGTAGCGCCACCCTGTACGTGGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCTTGAGGTCGGCGATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCTGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGCGGCATCGCCATCACAAGACCTTTCGCGTCCGAACGGCACGCTTGATCGCCGTCCCGGTCCTCGCGAAACGGCCGCCAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCGGGAAAAACTCGGTATTTCTTTTTCCTTCAAATGGTTATAGGTTTTCGGAGCTA # Right flank : ACTCGAACCCACCTCGGCCACAACAGCCGCCGGGTTCGCTGCCGTCTAGGCAGAACCACCCTCCCCATCCCGCTACCAAACATCCGAATATAAAGTTTCTACCCCACCCGCCCGCCAGCCTCGCCCGTCCACGACAATGTGCCCCGCTTGGAAGCTCACGCTCCTCATACAGACGAAAACGGGGTAGCGGCAATCGGCCATATCCGCTAAACAGTTGCCTTGGCGCAGAATTCGATAGATCCGATAGGGGCAGGCCACGGTCAGCATGGACGACATTTCTCCCAGCGAACTGAAGTCGATCCTTCACTCCAAACGTGCCAACCTGTACTACCTGCAACACTGCCGGGTACTGGTCAACGGCGGGCGGGTCGAGTACGTCACCGACGAAGGCCGGCATTCGCACTACTGGAACATCCCCATCGCCAACACCACCAGCCTGTTGCTGGGCACCGGTACTTCCATTACCCAGGCAGCCATGCGCGAACTGGCCAGGGCCGGGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTGTAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [60.0-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 192549-191743 **** Predicted by CRISPRDetect 2.4 *** >NZ_RXWK01000015.1 Pseudomonas aeruginosa strain MRSN12283 MRSN12283_contig00015, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 192548 28 100.0 32 ............................ TCAGCCGAGAGCCTGCTGGCCCTGATCAAGGA 192488 28 100.0 32 ............................ AACATCGACGGGTCGAACTGCTCCGGCACCTG 192428 28 100.0 32 ............................ TGGAATGACCGGGCCGTCGCTGAACAGTACTC 192368 28 100.0 32 ............................ AGCCGATGGCCCGCAGTAGTACCCCGATTAGT 192308 28 100.0 32 ............................ TCCTAGTTCTTCGCCCAGCCGGAAACCGAGGC 192248 28 100.0 32 ............................ AAGACGAGTACCTGAAAGACACCACCGGCAAC 192188 28 100.0 32 ............................ ACGATGGCCGGGTGATCGGTATCCCTGATCAC 192128 28 100.0 32 ............................ ATCGCCGAGCTGGTGGAGCACTTCCAGAGCCC 192068 28 100.0 32 ............................ TGGCCGTCCCAGGCCTCTTGCGGTCTAGCCTC 192008 28 100.0 32 ............................ ACAACATCAATCGCCTGATGCTGGGGCACCTG 191948 28 100.0 32 ............................ GACCCCCGGAGGACCAACCGTGGACAACGACA 191888 28 100.0 31 ............................ TCCTTCGGCTCCGCCGGCCGGATCGCTGCAT 191829 27 92.9 32 .....................A..-... TGTCGCGAAGTTCATAAGCGGGCTTAGGGCGA 191770 28 75.0 0 T.........AC.....TC.TC...... | ========== ====== ====== ====== ============================ ================================ ================== 14 28 97.7 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : CGAAGTCGTCGAGGACGAACCAGGCCTGGTCGTCGATCAGCAGCGCGCGCAGCAATCGCTGCTGTCGGAAGAAGTAGTGCGGGGCAAGCTGGGTATGGCCGTGCATAGGAGAAATCCTTCTCTGAGCTGTCCGCTGCCTGGCTTCTGCCGGCGCGGCAGGGAGACAGGCCGCTCGTGGGTGTTGGGCCAGCAGGCTGTGGCCTGCCGGGAACCGAAGTCGCCGGCGAAAAAAGCCTACTGACAGCGCCTGTAGGACGGCAATGGCTAAGCCTTGTACGAAGTCTCCGATGGCACAAGCCCGCTGAACAGCTAGGCCGTTCTGAACATTACGCCGGCATGGAGAAAACAGGGGATGGACGCTATGCTTGGGAACCCTTTTTTTGGTGGTTTTTTAAAGCCCTTTTAGATCAAAGGGTTAGAGATCGCTGCAAAAAGAGGGTTTTTCCGGGCTTTGGCGCTGGAGCCCTTGGAGCTTGGAAGGTTGATGGTTTTTGGGTCTA # Right flank : CGGCCAGCAGCCCTGAAGTATCGATTGATGCGGTTCGCTGTCGGCCGGGGGGCACCAGTCGAAACGAAGTCCCTTTCCATGAGACCTCGTTGCGGACATGCCGATGAGGCGCTGACGGGGTTCTTCAGAACCAGGGAACGGAACCTCCTTTGCTCAACCCGTAACAGGTGAATCCTCCTTCCTCTGCCGTCGCCTGCAACGGCCCGTGGCGGATGAAGAGACGGAAGTGCTGTCCGGTGCTCTGGCTGCGTAGCGTGACGAAGGGCAGGTCCAAGGCTCTCGCGACCGTATCGGGAATGCGTTTCCGAGCCTCCTCCTCACTCAGATCGTGCCGGCGCATGAGCCGCCGCCGCAGACGTTCCGGATTGCTTTTCGCCTGAACCCGACTGACCTGACGGTACGGTGTGGGGTGAGGCACGACTGCCGGTTCTCCGAATTGCAGATGGTCCCGCAACCCTTCCAGCCAGGGCCGGGCGAGCAGGGCACGAAGGTCGTCCGCC # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //