Array 1 240693-240237 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGHF010000012.1 Klebsiella spallanzanii isolate SB6408, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 240692 29 100.0 32 ............................. CAAGGCTGATTAAAAAATTACACTCGCCTATT 240631 29 100.0 32 ............................. GAATAATTGCAGCCATTGAAAAGAGAATTAAA 240570 29 100.0 32 ............................. GCGTTCAGCGGCTGGCGCTGGGATACGCTGAT 240509 29 100.0 32 ............................. CATCCCAGCCGCTCGGCGATCGTATACAGACC 240448 29 96.6 32 .....................A....... GACTTTGTTTGGCGCGGTGAGGAAATCAGCAG 240387 29 89.7 32 .....................A.G..T.. CCATAACTGTGGGGATGGCTTGCGGGAAAAGC 240326 29 75.9 32 .C.....T....TG..T....A.G..... ATCAATAGAGGTTGCGGCTGTCAATTTTCATG 240265 29 72.4 0 .C.......A..GG..T....A.G...A. | ========== ====== ====== ====== ============================= ================================ ================== 8 29 91.8 32 ATGTTCCCCGCGCCAGCGGGGGTAAACCG # Left flank : GGCGAGATATTGCGGTGTTCTCAAAGGGCAATATTCAGCGTCTGGTCGGCGCGCTGGCAGAGAGCCATCGCCTGACGCTGAATACGCGCTATCAGGTTGATTATATTGAAACCCTTTATGGTCTGGTGCGTTCCCGGCTGGCGGTGGCGATTCTGCCTGAGCTTTATACTACTCACCTTCAGGATCCTGCTTTGAAGATTGCCCAGCTTCAGCAGCCTGCTTTAACGCGTACCGTCGCGCTGATGCGCGGGCCTCAGCCTCTGCCGCCGCTAATTGAAGAGTGTTTTGCTTTACTGCTAAGTTCACTGCGGGAAGTGAATTTGTAGAATGCTATTACCGCAGTTCATTTTGGTGAAATGCGAGAGAGCTAACGAAATACTTTATCGTATCTATTAAAATCAAAGGGTTACCGCTCTTTAATAAAATCAATTTGTTGCAAAAATGTCGGTAGATTGTTTTATGTGAAAAAAATCATTATAAAACAAAAAGGTATGTTTAGT # Right flank : CATGTAGCATTACAGGCTTTACGCATCATGGCGCTATTGTGGGTCGATTAAATTCACCAGCTTTGTCACAACTTCGCAAATTAGCGCTTCATCTGCGGCAGCATAGAACTTAGCGTCACGCGCAATCAGGTCCACGGCTTTTAGCTGATGACAGAGAACGACGCCGCGCAGGTTACCGTTATCAGTATCGTGTGGTAACACGTTGACCGTCACTCCCTCAGAGCGCGCAGCGTTTGCGCCGGTCGAGATAGGGCAACACATTGCGACTTTCAGCGCCCTGTTTAGCGCCTGGTCAGTAACAACGATACAGTAATGAGGGCCGCTCAGCTCGTGACCGGCGACTGGGTCCGGGTTAAAGTGCCAGATTTCTCCGCGGTGTGGCGTCCTTGCCTTTACCATGCCTCATTCCCCTGTTTCCCATTTGCCCAGCTGTCGACCGCGTTGTTCAGCTCGGCGATCTCCTTCTCGTCAATCTGCCCTAGCAACTGAGCGACAGTGAG # Questionable array : NO Score: 5.83 # Score Detail : 1:0, 2:3, 3:0, 4:0.59, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGTTCCCCGCGCCAGCGGGGGTAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched ATGTTCCCCGCGCCAGCGGGGATAAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.20,-13.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [18-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 176981-177558 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGHF010000023.1 Klebsiella spallanzanii isolate SB6408, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 176981 29 100.0 32 ............................. ATGTTCAAGGGTTTCTGTCTTTGTGGCCAGAA 177042 29 100.0 32 ............................. CTGGATGGCGATAACCTGAAAGTTGCCCGGCT 177103 29 100.0 32 ............................. CGTGCGTATACGCGCGCCCCTCCTGGAAATTC 177164 29 100.0 32 ............................. GCATCACAACTCAACCCGTATACCACGTTCAT 177225 29 100.0 32 ............................. CCCAGGTTTGCTGCGACCTGCGCCAGACTGTC 177286 29 100.0 32 ............................. CTCCGGAGGCAGATGTTCCAGGTCAATAACAA 177347 29 100.0 32 ............................. CCCATATGTGAACATTTTTGCAAAATATTTTT 177408 29 100.0 32 ............................. CGCTACAAAACGTATGAGATGCTGTACTTCTT 177469 29 96.6 32 ............................T ATATTCCCTGACTATCTGTGCCAACCAGTGTC 177530 29 96.6 0 .............G............... | ========== ====== ====== ====== ============================= ================================ ================== 10 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CTGCCGTTATCTCTCATCGTTCAGGCGAAACTGAAGATGCTACCATCGCTGACCTGGCTGTTGGTACCGCTGCAGGCCAGATCAAAACCGGTTCTATGAGCCGTTCTGACCGCGTTGCTAAATACAACCAGCTGATTCGTATCGAAGAAGCTCTGGGCGAAAAAGCACCGTACAACGGTCGTAAAGAGATCAAAGGCCAGGCATAAGCCTGAACTTTCGTTCTGATATCAAAACCCGCTTCGGCGGGTTTTTTTGTGGCTTCTGTTTATTGATAATTTGTCGTCATACGTTGTGTTGTGTATGTCTATGGGTAGAAATTTTTAACAGTGGAGTAGAAATCACACTAATTTGGTAGAATTCAAGAAAGAATAGTTAGCTTACTTTTTATGATTTAAAATCAACTGGTTAGATGTTCTTTAATAATGCGTATTTGTAATGATTACGTTGGTAGAATGTTGTTATGAGAAAAAGTTTTTTATAAACATATAGATATGTTTAGA # Right flank : GGTATCGCTACCAACGCCCGGATGCGCCGCCTCCCGCTGAAGAGCCGCCGCCGCCGCGAAAACCGCCGCCGGACGATGAGCCCGAAGAACCTCCGCCCCCGCCAGACTTAAATCCGCCGCTGAGGACAATAATGACGATGACCACGACGGTGAGAAGAAATTCTGCGAAGCGGCTTGCGGCATTTTTCAGCCATTCGATATCCAGGTAAATGAGCAGGATGATTAATGCAGCAACGACGGAGAAAGCCAATACGATAAGCACTGTCTTTTTCCTGTTTTTGGAGACTTCAGGTGAGTCCAGACCCGATGACGATTTGTGATGTTTTTTTCCTGCTTTGGATGATGCCTTCTTCTTTTTGCCCTTTGCGCCGCCGGTGATTGATGTGATTAACATGCGGCCGCTAACGACAATATTCTTCAGTCGGGACCACAATGGCAAGGTTATCAACAGACTTAAGCTAATGTTCCCGGCCTGGTGAATGATAACGTCTTCCCGCAGA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 197350-197698 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGHF010000023.1 Klebsiella spallanzanii isolate SB6408, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================================================================================================================== ================== 197350 29 100.0 32 ............................. GCGGAATGGTGCGACTCGCAGACGAGTAAAGC Deletion [197411] 197411 29 96.6 68 .............T............... GTCGTTAACGACGTCCTCATGTCTGGGGATAAACCGGCGACGGCAAACCCGATACCCGAATTAAGGAT 197508 29 96.6 134 ...........................A. AGAGGGCAATCTAAAAAACAGACGCCGGGTGGGGGTCGAACCCACATATATGCCCTGAGGCACCGATTTTACCGTTAAACGTACCAGCGTCTGCCGTTCAGTATACTAATAACACGTGAGATGCCTGGCAATAT 197671 28 75.9 0 ..........T.-..A..A...C..T..C | ========== ====== ====== ====== ============================= ====================================================================================================================================== ================== 4 29 92.3 78 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CGGCCTGAAATACCACCCGCTGTGGGACCAGGGCTACTTGTCGGTAGGGGATACCCACACGACTCGTAAATGGGAGCCGGGAATGGCGGAAGAAGAGACGCGATTCTTTGGTTTAAAAAGAGAGTGCGGATTGCACGAAGGTTAAACTTATCTTAAGTGAGCCAGCATTGTGCAAATGCTGGCGTCATCATTATTTTCCCAACCCTGTCCGTTTATTGTAATAACTGGCTTCGCCTTCCGGCGATACCAGAATCACCTGCGCTGCCGGACGATGCAGCTTTTTACGGAACAGTTCAAGTATTTCATCACCCGGCTGTGAAAACTCACCTGATTGCTTCCTCCACCAGGAAATGCGTACCGATAATCTACTCATTTCCCAGCGAAAATCGCCTTCTGCGACGACTGGTTGCAATTCCCCTTCTTCACCCAACCAGGCCAGATAAACATCCAGGCTCTCTTCACCTAAACGAGTAGAGAATTCTCTGTCCTTATCCCATAAA # Right flank : CGACTCAAAACCCTCAATCTAATGACTGTCGTGAATCTGTAAGTTCAATTTTTGAGCCAATTAAAAACGATCCTGGGATGAGATAAGCGTGTCGATAAAGGCTTTTTTATGCGGATATTTCAATACGTCATCGATATACATTATGCCTGTTTGAAATGTTGTAAAAGCCTCGGTGATATCCAGCGCGACTAATCCTCGTCCCTGGGCTTCCTGTTTCAGCTGCAGGGGAAGCGCCAGTAAACAGCAGTTTTGCTTCGCAAGCGTAATCGCGGTAGAAACCGAATACACCTCAAATCGAACCCGCTCAGGCGCGATAGTACATAGTAGGGGGTCATCGGTTCCTCCTTCTTCATATTCATGCTTCAGCACAATCCAGTTGTACTCATTTAGTTGCGCGGTACCGATGCGTAGGGCCCCGGTCAGAGGATGTTCCGGCGCGCAAAAAAGCATGAAACGAGTGGAAAATATAGGTAAATAATGAATAGAGGATATCCGCGCTT # Questionable array : NO Score: 3.55 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:-1.99, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //