Array 1 11983-11731 **** Predicted by CRISPRDetect 2.4 *** >NZ_AOWL01000011.1 Leptospira kirschneri serovar Mozdok 1 str. Vehlefans 2 ctg7180000004981, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 11982 36 100.0 35 .................................... AACTTCCTGACCTACGCTGTAGTATGTGAAACTCT 11911 36 100.0 37 .................................... GGCTCCTATCCTCAACGCGAACGTTAGGCACGATAGT 11838 36 100.0 36 .................................... TATAGCTGAAATTCTAATGGCAATTGCTCGGAATTC 11766 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ===================================== ================== 4 36 100.0 36 CTGAACTTAACTTTGATGCCGTAAGGCGTTGAGCAC # Left flank : ATTGGCTAAAGTTATCGAAAAAGAAGACGACGTATTTTACCTGACTCTTTGCGCTAAATGCGCCTCCGGAGCTCACACCCAAGAGAAAAAATCGGCCTGGCCAGACGCACCAAATACTCTCAAAATTCTATAATTCAAGTATCTATTTATGGCATAGACATAATTCCCTTTTTTTAGCATCAGAATTAGCGTCTGAAGTCCAAACATAACTTCGTATTCGTCCATCTTTATAGAGATTCAGAAATAACCGCATTCTAATAGCAGTTAGTTGAAGTTATTTTCTTTCTTGCGAAAATTCTGGTCCAATTTATTATCAAATACGGATCAAAACATACTTGAATTGCTATTTCCTAATCGTACAGGTGGATTGACTCAAAATATAATTTATTAAAGAAATTCGAAATGAAAAAAAGTTATAAAAAGCAATATTCTTGTTCACCCTCTATATTTTCCTTTGTATCGACAATCTCTACACCTAAAAGCTATAAGATTAAAATGCT # Right flank : AAAAGGACAGAAAAATCGGCCGATGCGAAAGCGATCGAAGTGAAAATCCTGCAATGCAACATGATTTCACTATAAATATTCGAATATACTGAATTTATAACATGTTGCGTTGCAGATTGAAACGGAGAGCGCGGTTTTTCTTCGCGGAGGCGAAGAAAAATTCGCCCCGCCTTTTATTTTCCGAATGACCGAAAGCTGAATAGAATTATACCGCAATTCGAATATTATAAAAATAGGAACTTCTTCTTGGAAAATCCTTCGTTTTATTTTTTGATCGAGAATGTTTTTCGACCTTGAATCAAATCGTATTTTTTAACGTTTCATGGTCGCAACCCAATGTGCAATGTTTTTGAATTCAGGATTTTCCTCGAGGGAGGAAAAATATTCTCTCGCCCATAAGAAATGAGCGCTTAAATACTCTTCCTCCTGGAGTTCCCGCAAATGTTGTAGTGCCAGTTCCGGTTGTTTGTTAATCGCAAAATATCCGGCAAGCACGAGTC # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGAACTTAACTTTGATGCCGTAAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.00,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [55.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA // Array 1 19917-20170 **** Predicted by CRISPRDetect 2.4 *** >NZ_AOWL01000115.1 Leptospira kirschneri serovar Mozdok 1 str. Vehlefans 2 ctg7180000005085, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== =================================== ================== 19917 38 100.0 35 ...................................... CGTGATTTCGATCGCAACCGATCCGATTACAGGAA 19990 38 100.0 32 ...................................... TTTAAATCTTGATTCTCGAATTATAAAAAATA 20060 38 97.4 34 ...........................T.......... TTTGGTTTCTTAGAAGAACCACAGAAGAGACGAA 20132 37 81.6 0 ..............G...G..G....C....A.-...G | TT [20160] ========== ====== ====== ====== ====================================== =================================== ================== 4 38 94.8 34 TGTTTCTTCCTCTTCTTTAAGAGGAAGCGGATTGAAAC # Left flank : TTTATAGAGAATTTTACTAGGTTGTTTCAAAACTAAAAACTTCGCGAATGTTTACCGACGAGTCAGTCTATTTTGCTGAGTTTAAATTCAATTGTTTTTGAATTGATCCTTTCAAAATCTCTAAAATTCGTAAGGCCTAAAAAACATTTTTTTAAAATTTTGATTTGAGATAATTTCTAAAGAATTCTTCCGTTTCTTTTCCGAAAATTTCAGTTAGGTGAACATTGACTCATTTATAGTTTTAAATCTATTTTTCCTGGAATCCTATTATAAGTTTTTGCCTTTGATTAGCCGATCTTTTACAATGAATTGTTCTTTGCGAACCTGTTTTTCCCGATCAATTGTGGATCTTTCGCGCTCTTGTATAGATTCGTTGTTTGGCGATGGAATAGATTGGCTTAACAATTGTACAGTATGGTGAAAATAGGTTCGCGATTATTATGTCTAGAAAGCTTAATAAAGTATTTTATAATACATTATTTTCAGTCCTATCAAGCCGC # Right flank : GTGTTTAAAATTTTGTTCCTGAAACGAAGATTCTTTTCAAAAGTTATGATACTCTAATATATGAGAAATGACTAATCGATAGGGATTGATTGCTCGGAACAATGATTTCTAAGTTTTGTGAGAGTTCCCACAATTTTAAAAAATTGGAATGTTTTGTATATCAAACACTACAGGTTTTTATTTAACATAAATTCGAAATAATAGAAATTAGGAAAAATCTATTCTAAGAATAGGAGTTCCTTTTTATTTTTACGGACTCAAGTTTCTCTTTCGGAGAATGCCTGGTTTGGTAAATTCTACCGTGAAAATTGAGTATTCGTGGTGGTAGTTCCCACAGATTAAGTCTCTTTGTGAATGTATAGGTTTTAAATGCATTTTAACGTGAGTTCGACGTAATAAAATTAGGGCGAATCCGGCTTGCCACTGGCAGCCGGACCAGGCTCTCAGCTTCGGTCAAGTTATTGTGAAACTACAGAATCAGATTCAATTTTCATAAAATA # Questionable array : NO Score: 5.60 # Score Detail : 1:0, 2:0, 3:3, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGTTTCTTCCTCTTCTTTAAGAGGAAGCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.53%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-11.10,-12.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA // Array 1 66-535 **** Predicted by CRISPRDetect 2.4 *** >NZ_AOWL01000152.1 Leptospira kirschneri serovar Mozdok 1 str. Vehlefans 2 ctg7180000005122, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =================================== ================== 66 37 100.0 34 ..................................... CACGTAGGGTTACAATACTGATCCGCCGCATCGT 137 37 100.0 35 ..................................... CTTGCACCTTTTGCGTCTATTGGAGTCGCAATATC 209 37 100.0 34 ..................................... GTACAAAGTTATTACTGGGACTAATAGGGATTCT 280 37 100.0 34 ..................................... TGCAACTGCTACGGGCACAATCATAGACTTAACG 351 37 97.3 34 ...................T................. GGCTGATAAGATTATAGAGGTTGTATCTAATCTT 422 37 100.0 34 ..................................... CACTTATCGGCGGTCTGAAACCCTTTGAGCAATG 493 37 94.6 0 ..........................A........G. | AA,ACAA [519,524] ========== ====== ====== ====== ===================================== =================================== ================== 7 37 98.8 34 GTTCTTTCTCTTCTTTAAAAGGAGAGTGGATTGAAAC # Left flank : TTATTATGTCTATAAAAGCCAATAAAGCTTTTATAATATATAATTTTTCTACCTATCAAGCCGCTG # Right flank : CCAATCTAGAATAAAGTTGGGATCTGGACTTTGTAGATCGATTCTTTAAATATAGGAACTACCACAATTTAAAAAATAGAAGTTTATAACTTATCGTATTCAAGTGTGGAACTACTGGTAAATCCACGATTTGTATGAGTTCCCACATTTTTGAGACCAGAAATAGGAAAGGTTTAGTTTCTATCCTCTGGACGCGAAATCGATACAAGGGAACTTTAGCAGAACGTTCTCTCAAATAAAAGACGAGATATTGTATTAGGTTTCTTTTATGAAATTTATTGACTGGAGCCAAAAGTACGGTCCTGCAAAGCCGGATTCGCCTAAACTTTCTTAAGTAGAATTCGCATTATTTAGTGTAGACTATCGGATTGGATACTTTATTATGCAGCTCAGATCAGTGCGTAAAAATTCCCTTCTAACTTTTATAATACATTGCTCATAGAGCCGGTCTCAAAACCTAAACACCGACCCTTAGGAAGGTGTTTGCTGAGTTTCACAAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTTCTCTTCTTTAAAAGGAGAGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.20,-3.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : NA // Array 1 1619-1396 **** Predicted by CRISPRDetect 2.4 *** >NZ_AOWL01000154.1 Leptospira kirschneri serovar Mozdok 1 str. Vehlefans 2 ctg7180000005124, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== =============================================== ================== 1618 24 100.0 47 ........................ AGTGGATTGAAACTTTTTCAGAATGCGATTTCAGCCGGTTGATGAGG 1547 24 100.0 47 ........................ AGTGGATTAAAACTTTGTAATTAGTGTTTAATTTTGATTCTTTATTT 1476 24 100.0 33 ........................ CTATTTTATGTGGGATCGATTCCTAAGACATGC 1419 24 75.0 0 ........T...A.....C.T.AG | ========== ====== ====== ====== ======================== =============================================== ================== 4 24 93.8 43 GTTTCTTCCTTTGTTTAAGAAGGA # Left flank : CATGGTTCTTATTCAGAACCATACAATCAATTTCCCAGTATTTTAGGGTTTTGCAGTAAAACTTACGGCTCTCCATTTTTTAGAACTAAAGCAAAATGCTCTTTATTGGATTGGGTTCTTTTATGTAGTCATAAAGTAAGAGAAAAATTCCATACTCTATAAAATGAGTTTTTGAGACCGAATTTTTACTAAACGTTTAAATCAATCTTCTGAAAATTCATTCTCTAGATATTCATCTACTTAGACTTAAAACTAAAGAATTTATAGTTTATATTCTTGACTTTAAAAAACGGACCATTTTATGATGAAGCGCTTTTTGCGAACCTGTTTCTCCCGATCAATTGCGGCCCATTCGCGCTCAAACGAATAACCACCGTTTAGCGATTGAACAGTTTTGCTTAACGTTTATACAGTATGGCGTCAGTAGGTTCGCGATAATTATGTCTAGAGAAACTAATAAATCTTTTCCTAATACATCAATTAGAGACTGTGCAGCCGCT # Right flank : TTCGATTTAGAACTTTCTGAATTTATCTATAAAAATCACAGATTGTATAAATTCCGATATTCAGCTTTTTATGATAAACTTCAGGTTTATAAAATGAATTGATTCAACCCAAGTTCTTTAAAACTACAGCAAATCTTTATTTAAGGAAAGGATACAAAAGACCGAAAACGGCAAAATCTCTAGACTTTCTTCTTCTTGGAAAACAATTGTTAATTAATATTTTAGAGAATTATAATATACTTGATTAGAATTTCTAGAAATTTTTATTTTACCGCTCTATACTCAAAACGTACCACAACTCAATTTTCTCCAGTTAACTTACAGGTGTCTCAAAACCAAATCGCACTTTATCAGAAAGATCAATCTGAATAACGAAAGTGCCTCACTTCTATTGACGCTCGACAGATTCTTATTATATTAAATCACGTTATCGCAAGGTTTTATTCTTTACCTTGAAAGAAAATAATTTAAAATAAACGAACATGAAATTTTTTATCAGC # Questionable array : NO Score: 2.55 # Score Detail : 1:0, 2:0, 3:0, 4:0.69, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCTTCCTTTGTTTAAGAAGGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 18554-18374 **** Predicted by CRISPRDetect 2.4 *** >NZ_AOWL01000165.1 Leptospira kirschneri serovar Mozdok 1 str. Vehlefans 2 ctg7180000005135, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =================================== ================== 18553 37 100.0 34 ..................................... ACTTGCGAATCAGTCGTATAAGATCGCGGATCAG 18482 37 100.0 35 ..................................... AGCTTCGTCCATAACGGAACGAACGCTTGATATAA 18410 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== =================================== ================== 3 37 100.0 35 GTTTCTTCCTTTGTTCGCAAAGGAAGCGGATTGAAAC # Left flank : TAATATCTTGATTTGTGAGAGTTCCCACATCACTTTACTGACAAACCTAAATTTTGTAATAGCTCCCACATTTAAATACTACAGATTCAAGTATTATAAAATTCTATTTTTTAAATTGTGAGAGTTCCCACATTTAAGGAATCGATCTGTAAAGTTCAAATTCCAACTTTTTAGAATCATAAGTTCCTTACGCCAAACTCACGTTATATTACAATGATTCAAAACCAAATATTACGTCTCTTTAGATATTTAAGAATAGTTTATTTTTATTATATTATTGACCTTTAAAATCCGATTATTCTATAATAAAACGCTTTTGCGAACCCGTTTCTCCCGATTTTACAGTGGACTTTCGCACCCAAACGTATACACGTCGTTTGGCGATTGAATGGTTTCGCTTAACGTTTATTCAGTATGGCACATACAGATTCGCAATTATTATGTCTAGAAAATGCTATTAACCTTTTTCTTATACATTTTTGCGGGGCTTTTGAGCCGCT # Right flank : TCCGCAGGCAACCACTGAAAACCCATAACCAACCCACAAGTATTTAGATTTCAATATAGATCTGTCGGAATTACGACAAATCCTCTGTAAAACTGAGTTCCCACCCTTATTTTTGGGTGGGGGCGGAGGTGGAGAAATTCGGAAGACTTTTCTCTATCAGAAAAACATGCTTTTTGCAAGTAAAAAGACTCATTCTTGTCGGGACACTTGAAAAATGTGCGTTTTTGATCCCACAACGCGACCCTTAGGGAGCGATGCATTGAGTTTAGGAAAGCGTTTTGCTTTAGTTCTTTAACGCGATCCGTAGAGAGCGTTGTGTTGAGTTTAATTCTGATTCTAAAATCTTCTTCAACTTGTGGGGTTGGTTATGCTGAAAACCTTCTCGCGTTGCGTTTCTTCCTTTGTTCGCAAAGGAAGCGGATTGAAACAGGTCAAGCGAATCACCAAACTTCTTTTTGATTTGTTTCTTCCTTTATTTACAAAGAAAGAAACAAAAAAGA # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCTTCCTTTGTTCGCAAAGGAAGCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-8.30,-8.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA // Array 1 29160-29411 **** Predicted by CRISPRDetect 2.4 *** >NZ_AOWL01000076.1 Leptospira kirschneri serovar Mozdok 1 str. Vehlefans 2 ctg7180000005046, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 29160 37 100.0 36 ..................................... CATTCTTTTCCTCTTTTGCCAAAATTCGGTTTTTGT 29233 37 100.0 33 ..................................... GTATACCGTGGCCGTTGTTATCCTCTGTATACC 29303 37 100.0 35 ..................................... CGAGTCCACAAGGATAATGTCCGTTTTTAAAGTAG 29375 37 97.3 0 ..........................C.......... | ========== ====== ====== ====== ===================================== ==================================== ================== 4 37 99.3 35 GTTTCTTCCTTTGTTTAAGAAGGAAGTGGATTGAAAC # Left flank : CTACTTCGATAAGCATATATTCTGAAATACAATCCATTTAGAACTTCTATATTTTTAGAATATTCCATTATTTACTTATAATAAGGCCCTACAAATTTTAGAAACAGATTTAGTTTAGACAAAATTCTGTACGCTCTGATTCTATGGTTTCTGAATTAGTTAAGTTTTCAAGTCCAGCGCTTGGACAATCATCTCAACAAGAATGAAAGAACCCTTGAGTTAAATTTCAAAATCGATCTTTTTAGTCACAAACTGAACAATCCGGAATTCAATATTCTTGACTTTAAAACCTGGGTCATTTTATGATGAAACGCTTTTTGCGAACCTATTTCTCCCGATCCTTTGCGACCCTTTCGCGTTTCAATAGACGGTCGCCATTTGTCGATTGAATGGGTTTTGCTCAGCAATTACAGTATGTTACGATTAGGTTCGCAATTATTATGTCTAGAAAAGGTAATAAAGTTTTTTCTAATTCATAAATTGAGACTTTTCTAACCGCT # Right flank : CTATGTGGGCGGTCTTACGACCATATTTGCCTACTCCATTAGAATGGAAACGACAAGCTTTGTGACATATTTAACTAATTTTAATTTTTTCTTTTTAGCAAATTGAATCTTCTTTGCGATCGTTTTTGATGCGACCTTTCTTTCTCTATCGAAGAGAACGTAGGTTGAAATTACCACGGTCTTACGACCACATTTCTTACTTTGTTCGCAATGGATGGAAATCGGCATTTTAATGCCGATTGACTTACAAGTAATAATTTAACGTGAATTCGTCGTAAGAGATTGTTTGATAAAAACCTGATTTTTCCATAAAAAATCAATGTTTAAAAATTTGTAATGCGGTTTGAGACGCAGAAATTCCCAAAAATCAAGTCGGCCCGGATTATTTAACTTTTTGTGGTAAATCCTACATTCTCAGTTTTTTACAAACTAGAATTTGACATTATGCGAAATTAATCGACGCGGGGAACTTTAGCAGAACGCTCTTTCAAACCAAAGCG # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:0, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCTTCCTTTGTTTAAGAAGGAAGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.70,-4.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : NA // Array 1 1023-559 **** Predicted by CRISPRDetect 2.4 *** >NZ_AOWL01000097.1 Leptospira kirschneri serovar Mozdok 1 str. Vehlefans 2 ctg7180000005067, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =================================== ================== 1022 37 100.0 34 ..................................... TTCAAACTTAATGGAAATTCCGTCTTCGGTAGTT 951 37 100.0 34 ..................................... CAAAACTTTGTTCCGGAATCCTTGGACACAAAGA 880 37 100.0 34 ..................................... CCGCATAAGTTGATAGAGCGCGTCATGTACGAGA 809 37 100.0 34 ..................................... TCGTAAGTATATTATTAAATGCCATTATTCTAAC 738 37 97.3 34 ................G.................... TTCCGCGTAATCGCTTGATATATAACGTCGTAAC 667 37 100.0 35 ..................................... TGTAACCATAACTCTGCTCCTCAGTCCCAACCCGA 595 36 86.5 0 ...........................T.-.CA...A | G [569] ========== ====== ====== ====== ===================================== =================================== ================== 7 37 97.7 34 ATTTCTTTCTCTTATTAAAGAGGAAGTGGATTGAAAC # Left flank : TAGAAAGATTATCACAGTCCAAAGTTAGAATTTTATCTTCTTCGATTTTTCCCCATTGAATCGAATTCTTTTTTTTGAATCGTATATAGTTAGTCGCCATTCAAAATACCTAAACGTATAATAAGAATTTTATAAAAATGCCATATTTGTGATTAATATATTTTTAAAATACAACAATCAGTAAAGAACATATTTAGTTGAACAACATTTTTTATTTGTTTTTATAGAAAACCCTATCTTTGCATAAATTAAGCGGTTTTTAGTTTCAGGATATTCTTGACTTTTAAGGGCCGATCCTTTTATGATATAACACTTTTTGCGAACCTGTTTTTCCCGATCCTTTTCGGCCGGTTCGCGTTTAAACCTTTGGTCTACGTTAGTCGATTTGACGGTTTTACTTAGTATTTGTATGGTATGCTCCGATTCGGTTCGCAATTATTATGTCTAGAAAGCTCAATAAAGCTTTTTCTAATCCATAAATTTGCACCTTTTCGGCCGCT # Right flank : AACGATTTATTTAAAAAAAAATTTTATTTTAGGTTTTAAGGCGACCTCTTTATAAAAGTTTTCTCTTAAAGAGAAATCCTAGATATTCAATTATAAAATTCTAATTCATATAACGTGATTTAAATTCTAGATATTTATTTTATAAAACTGAATTTCTTCGTAAAAAATTGCGAGAGAACGATTTAAGCTCTACTGAAAAAATGTAGGAACTACTACATTTTATAGATTTAATAAACCATTGTTAAACTTTACAACAAAGTACGACTATGAGAGGTAGTTTGTGGGAACTCATACAATCTGATTACTGTGATGTAGGTTTATTCCAAGCAAGGAATTTGGTTCTACTACTGATCTCTATAAAATTAAGTACCGTTAATTTTATCGCAAAACACTGATTCCATGCAAAATATTAGGTACTTTATTGATAGTTATGAGTGATAATTATATAATAGAGTTGTTGAAAAATTAATTCTCCATCTGTTTTCTATTTCATAGAAACG # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:0, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTCTTTCTCTTATTAAAGAGGAAGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.30,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : NA //