Array 1 15461-20011 **** Predicted by CRISPRDetect 2.4 *** >NZ_QNUI01000058.1 Calidifontimicrobium sediminis strain YIM 73032 s73032_Contig58, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 15461 36 100.0 32 .................................... CCACAGAATTCCGACCATTCGAGGCCACGCCG 15529 36 100.0 32 .................................... CCACAGAATTCCGACCATTCGAGGCCACGCCG 15597 36 100.0 34 .................................... TAAGCGCAGCTTCAAAGCTGCATCCAGTTGCTCG 15667 36 100.0 31 .................................... ACATCGCTGGCGTAAGGCTTCTCACCTTTCG 15734 36 100.0 33 .................................... CACGCGGCCCTACCTCAAGCGTCCATTCGGGGT 15803 36 100.0 32 .................................... TTCAGCACGAGTCTTCGGTCGGGGATTCGTAG 15871 36 100.0 34 .................................... GCGTTATTGCGCGCTGGCGCTCGGCTTCCTCTAC 15941 36 100.0 36 .................................... CTGCGGCTGGGCGTACGCCATCTCGGCGTACCAGCT 16013 36 100.0 36 .................................... GTCGATGGCGGCTTCGATGTTGAGATGAATTTGACG 16085 36 100.0 38 .................................... GCCGCAAAGACTTTCATACTTCACTTTCTTTTTATGCC 16159 36 100.0 32 .................................... TCGGCACTGCATCCCGTTTGACGGGCGATTTC 16227 36 100.0 33 .................................... GCCGGCGAGCTGTCGAAATCGCGGGACCGAATG 16296 36 100.0 36 .................................... GGCGGCTTTGTATTTGTATTTCATAAAACCTCACTG 16368 36 100.0 32 .................................... CTACGAGGCGCATGCCTCCACGCGGCCCTACC 16436 36 100.0 34 .................................... CTTTCATAGATGAGTTCTCCGATGCTGGACAGTG 16506 36 100.0 34 .................................... CTCCATAGCCTCGTCTACTTCGTCGAGGCTATTC 16576 36 100.0 33 .................................... CCCGCCTCGCGATCGCTTTCGATGATCGTGCCT 16645 36 100.0 32 .................................... CGGCACGCGCGACGATCCGCGCATCCCATCGA 16713 36 100.0 33 .................................... GGGTACTCTTGAAAAGTATCCGGCCCTGCGCCA 16782 36 100.0 35 .................................... TACAACGCCGACTGGGTTTCCGCCATAACGCCTAG 16853 36 100.0 34 .................................... CCCGACTTCGTCGAGGGCTTCGAGTGCAGCTTCG 16923 36 100.0 36 .................................... GGAAACCCTATCGCGACGGTTCGGTCGCGCTTTTGG 16995 36 100.0 36 .................................... GGAAACCCTATCGCGACGGTTCGGTCGCGCTTTTGG 17067 36 100.0 32 .................................... CACAAGCGCGGGCGATTTCGCCCGCGACGACG 17135 36 100.0 33 .................................... AATCACCCGTGCGCTTGCGTCGAGTTCTTGAAC 17204 36 100.0 34 .................................... TGTCTTTTCCACATCTACCTCCAAAGTATCTGAG 17274 36 100.0 36 .................................... CGAGCGCCATAAGTTGTTCTTTCATAAGTACCCCCT 17346 36 100.0 32 .................................... CCGCAAACCCGAGATCTTTCGCGTTATTTCGC 17414 36 100.0 34 .................................... GGCTTCGCTTCTTCCCACTTCTTAGCCGCGAGGC 17484 36 100.0 34 .................................... CGTCAGCGACGAGCTTGTTAGCGCTCTTAGAAAT 17554 36 100.0 33 .................................... CCCTGTCAACCCCGCGGCTTTCACCGCTTAGGT 17623 36 100.0 32 .................................... GAGGTGGGACGGTGAACTTCGTAAAGCTCTAC 17691 36 97.2 34 ............T....................... CTCAGCATCTCGAGAACTTCGTCTAGTTTGGACT 17761 36 100.0 32 .................................... AAAAAGCGGCTTTGTATTTCATGAGATACTCC 17829 36 100.0 33 .................................... AAGACGGAAGAACTCTTGAGCTACAAGTTTTTC 17898 36 100.0 31 .................................... GGATCGTGTCGTGCCAGTCCCTCATGCTGCG 17965 36 100.0 34 .................................... GGCCGTTGTGGACGAGGGCGACCTCGAACCACCC 18035 36 100.0 34 .................................... AATTTGCCGATGCAACCTTTTGAAGAAAGCATCG 18105 36 100.0 31 .................................... TCTTCGCGAACTCGGCCTTGTCCACCTTTAG 18172 36 100.0 33 .................................... CGGCTTGTGTGTGTAGGTGAAGCCCTTCTTGCG 18241 36 100.0 34 .................................... AGGCTGGGCGTACGCCATCTCGGCGTACCATCCC 18311 36 100.0 31 .................................... AAGCGACTGACGTCAGTCGTCAAGTTGCTAC 18378 36 100.0 32 .................................... GCGTCGCGGAGACTCTAGGTCATCCCAGCGCT 18446 36 100.0 36 .................................... GGCTAGGGTGTCTTTATAGTCCCGGTGTCGCGCCGT 18518 36 100.0 33 .................................... CGACGTACAGTCGCGCCTCGGCCGATTCGGTTG 18587 36 100.0 32 .................................... GCAACAAGCGATTGACGTCGCATTCCTTTCCC 18655 36 100.0 34 .................................... GCCATTTTTCTGTACCAATTCTCCCCCCCGACTT 18725 36 100.0 34 .................................... AGGAACGCGGCAAAAACTTTCATCCTTTTCTTTC 18795 36 100.0 31 .................................... TCAAACTCGCAGCCTATGAGGCTGGGGTCAT 18862 36 97.2 35 T................................... GAACCAAAAAGCAGCTTTCACTTTCATAATGATGG 18933 36 100.0 33 .................................... CCACGGCGTCGTGAAGGATGCCGACGATTACCG 19002 36 100.0 34 .................................... GTCCAGTTCTTGGCCGTCTGCGACCAGTAATAGC 19072 36 100.0 36 .................................... GTTCCACCGCCGGCTGAGACCCAGAAACCGCCGTAA 19144 36 100.0 36 .................................... CGATACGTTTTTGCATCTTTACCTCCGAAGTACTTA 19216 36 100.0 34 .................................... GCGTGGAACTGGCGCAGGTCCATGCCGATGTGCG 19286 36 97.2 32 ........T........................... AGTTGGCCTGCGGGTGCCGCGACGTTCTTGTG 19354 36 100.0 35 .................................... GACACGTTTTTGCATAGCTTTCTCCGAAAGTACTG 19425 36 100.0 31 .................................... ATCGCGCTGGCGAAGATGGAAGCCAAACATC 19492 36 100.0 31 .................................... ACGATGACGTAGGCAGTTCCGCCTCCCGCCG 19559 36 97.2 35 ..........................A......... TTTTTAGCCGCGAGGCTTTCCCGCAGCGCTGCCTC 19630 36 100.0 34 .................................... TCTGCAGCTGCCAGCTTTTCCATTTCTACCTCCA 19700 36 100.0 33 .................................... CAAGAAGCCTGCGATCTTCCTTGAAGCTGTCAA 19769 36 97.2 33 .............A...................... TGACGTCGATACCGGAATCGGCCCCGTCTTGGC 19838 36 100.0 31 .................................... CGCAGCTCTCGCGATTGTTCTCGCGTCCCAC 19905 36 97.2 34 ........A........................... GTTTGCCGCGACGACGGTTTCGTCTGTCATTTCG A [19927] 19976 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================== ================== 66 36 99.7 33 GATAAAACCAAGCCCTGAAATCAAAGGGATTGAGAC # Left flank : CCCGGCTTGACCACACTGCGGCTGCACATTGAGACCCCGCTGCGCCTTCAGCACCAGGGCCACGCGCTTGGGCCGCAGCGACTGGATACCCGTACGCTCATCCTCGCAGCAGTGCGTCGTGCAACCCTGATGTTGCACGTGCACTGCGGCCACGACGCCGCGCCGGACATGCCCAGCGTGTTGAACGCCGCTGCCAGTGCCGTGGACGACCGTGCCGGCCTGAGCTGGCAAGACTGGACCCGCTACTCGTCACGACAGCAGCAGGAAATGGCACTGGGCGGGGTTGTGGGGCAGTGGCAACTGGCCGGCAGCGCCCTCGCGGCCGCATGGCCGTGGCTCTGGCTGGGGCAATGGCTGCATCTGGGCAAGAACGCGACGATGGGCCTGGGAGCCTACCGCCTGTCAACGGATGGATGAGAGCGAAAACTTCTTCGGAAAGCCAGATTGCCTGCAGGCACCGTCGCAAGTGCCTGTCGCAGAATACTTTTTCCGCATCTGCG # Right flank : CCGGTTCCGGCTTAGTCGGGCCTGCGAAGTTCACATCAACGCCGGTTGTGGGCGACGACGGACGCCGGCGACGTCGCGCGAGGGCGGCCAGAGCTTGCCGACGTGCGCAGATGCCCCGGCGGCGGATTCCACGGCAAGCCGGCCGTACAGCATCAGAACGTTCAGGACCAAGAAAAGGCCGCGCAGCCCCAGGCGCGCGATCGCGCGCAGCAGCCAGCGGATGTTGAAGCCGGCTGCGCACAGCACCGCGTGCAGCGCGTCGCCGTCGCTGCCCTTGAGCCAGCAGCGGTTCATGCCGTGGTCGCTCTTGGTGTGGCCGATCGCCGGCTCGATGGCCTGACGGCGCCTGAGCCAGCCGCGCTGCTGCGCCGTGAGAGTCTTGCTCTTGCCGCGGTGGATGACCTGGACCGACACCGCGTCGTCGACACCGCGATAGCCCAGGTCGACGATCGCCGCCTTGGGCTCGACGCCGACGTCTTGCAGCAGGTTGCGCGTCTGCT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATAAAACCAAGCCCTGAAATCAAAGGGATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.00,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 22483-21686 **** Predicted by CRISPRDetect 2.4 *** >NZ_QNUI01000058.1 Calidifontimicrobium sediminis strain YIM 73032 s73032_Contig58, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================== ================== 22482 36 100.0 35 .................................... GACGCCACGAGGCCCGAGCATCTCGCCGGTCGGCC 22411 36 100.0 34 .................................... TCCGAAGCGAAGTAATACGCGTCGGCCCAGTAAC 22341 36 100.0 33 .................................... TGCGGCGACAGTCACTTGTTGTATGGTTTGAAC 22272 36 100.0 33 .................................... GCCAGTAGGGGGCGTGCAAAGTACCCTGCCGCC 22203 36 97.2 33 .....................C.............. TCTTCGCCAGCAGCAAGACGTGTTCGGCTTGTG 22134 36 100.0 34 .................................... AGTCGGTGCGCTTCGTCTTCGTCGTAGATGCCTG 22064 36 97.2 32 ....G............................... CCAAGGATTCAAGGAGGTGTTGTGAGCCAAGC 21996 36 100.0 34 .................................... AACTGCGGGCTATCGAAGAAGCGGCGCTGCGTGA 21926 36 94.4 33 .C..........A....................... GAACCCGCCGTGCGTAGAGATAGAGCCGTGGGA 21857 36 100.0 33 .................................... AGTCGCAAGGGTCTGAACCAGACATTCTTGAGG 21788 36 100.0 31 .................................... CGGCCTCATCGCGAAAAACGCGACGAAGCTT 21721 36 97.2 0 .C.................................. | ========== ====== ====== ====== ==================================== =================================== ================== 12 36 98.8 33 GTCTCAATCCCTTTGATTTCAGGGCTTGGTTTTATC # Left flank : TGTGGACAGGCCGGCAAGCGGCCTGTCCACATACCCACCGGGCTCGACGACCAAGGGTCATTGTGAATGTTGGGTTCCACACGAAACGACGAGGGACCGCAGGGTGATCCGACGTCAGGGCCTACCCGAACAAATTCGCCTGCTACATCAACGACTTGGACATTCCCGGGCCAGCGGAGCTCACGGATTCAGGTTTTATCCAGTCTGACGTCGCGAACAACAACGCTCTGCGCC # Right flank : AACAAGAAGTGGGAAGAGGCTAAGCCGTCGGCCCTGCAAAACCCCCGCAACCCGCATGAACACTGGCTTTGCGGGGTGAATGCCGATGGCGCGAACTCCCAGCAACGAATCCAATAGGCCGCAGTTTCTGGGAGTTCTGAGACTGCTGCCGATGGCCACCGACGACTTCTTCCGCGCGCGCCTGGACACGATGATCGACCTGCGCCACCCGCTGGCCGTGCTGGCCACGCGCATGCCGTGGGCGCAGATCGAGGCGGCGCTGGCGCCAGCCTTCGCCCACCGCGATCGCGCCGGACGGCTCGTCGAGGGCGCGGACCTGTTCGGCCCGACGGTGCAGCTGGCCGGCGCGGGCGTGAGCAACGCGGGGCGCCCGCGGCTGCCGCTGCGCCTGATGGTGTCGCTGCTGTACCTCAAGCACGCCTTCAACCTCAGCGACGAGGAGCTCGTCGCGCGCTGGAGCGAGAACGTCGTGTGGCAGTTCTTCAGCGGCATGACCTACT # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAATCCCTTTGATTTCAGGGCTTGGTTTTATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.00,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //