Array 1 40930-40062 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP006841.1 Corynebacterium lactis RW2-5 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================ ================== 40929 36 100.0 28 .................................... CTAGGACGTTGAGGCTAAAAGCCCGTGC 40865 36 100.0 28 .................................... GAACGCTGCTAGGTCAACTGCCGTCTCC 40801 36 100.0 28 .................................... CACTTGGCAAAGCAACAAAGATTGAGAA 40737 36 100.0 28 .................................... GTAACGCGACAATCCTGCTCGCCGTCGC 40673 36 100.0 28 .................................... GACGAGGACATCTTTAGCTACCCCTCGC 40609 36 100.0 28 .................................... CCCAACCGGTGGGCCATCGACCAGCCAC 40545 36 100.0 28 .................................... GACTCTCGGGTGGGAGATGCTGCAGTGG 40481 36 100.0 28 .................................... GTGTGCTGGTCAACGGTGCGAAAGCCGG 40417 36 100.0 28 .................................... CTTCTGTTGCTTCCATCTTTGTTTTTTC 40353 36 100.0 28 .................................... GCGGTAGGTCGAAGGGCGTGGCTGATGC 40289 36 100.0 28 .................................... CGTTGGGTAGGCGGGGTTGCCAGCGGAT 40225 36 100.0 28 .................................... CTTTCCGCGTGGTAGACGGCATTGAACG 40161 36 100.0 28 .................................... GGGTGGGTTGAGGTTTGTTGGTGTCGGC 40097 35 80.6 0 ................T..C..TG.-........AT | G [40064] ========== ====== ====== ====== ==================================== ============================ ================== 14 36 98.6 28 GAAGTCTATCAGGGGAAATGAGAACCAATCCCCAGC # Left flank : ACGCTGACGGCCGTACCGTATCAACAATGCTCGGTTCACTTGCACAACAGTTCGGCTTGTACGCAGAAGGTGATATTCAACAGTTCAGAGTGCCTACGTGGTGCGGTCCCTTTAAGGCTGAAGAATAATGCCCGGAGATAAGCGGATGTGGTGCATAGTTATGTTCGATCTGCCAGTAAAGACTGAGACAGAAAGAAAGGAAGCGACCAAGTTTCGCAACTATCTATTGGATAGCGGTTTTAGCCGCGTCCAATACAGCGTCTATGTCCAGTACCTTCCTCTCGGGGCACAACTAGCAAAAATTGCAAAAGACATTAAGGCCAAGCTTCCCCATGAAGGAGAAGTTCGAATCGTCCCACTCACCGACAAACAGTGGTCAAATGCATTTCGTTTTTCTAACGCTTCACCAAAGAAGGTTGAAAAAACGCCCGAACAGCTCGAGATTTTTTAAATAAAAATCCCCTGATAAACCTGCTCAGAAAGCCTTTTTACGGCCCTTT # Right flank : TCTATTCTCCCCTCCCAGCGATTCTCTGGGATATTTCTAGGCTCCGCGACTCTCAATCACTTCACCCAATTTAGGCACAATATTTCGAACTTCTGCGCTTTCTCGATGCCTGGCTAGTACCCAAACTCTCGCACTTGGTCGCGTCAGCAAACTGAGATATCGGCCTTGGTCGACCAAGAAAAATAGACTTCAGGCCAAGTTAAACCAGGTGAGTTTCCCTCCTTCTGACTTCGCACTGACGCCTCTTACGTCCCCTTCACATTCAGCACCTGGCGCAGTTGGTGTACCACTTCCACGTCACTGACCTCATCGACCCCACGCGGCCCAGCCCAGCTCCTTCAGATACTGCGTGAACTCGGAAGTCCCCTGCGGGAGGTAGGCGTAATCGCAGCCCGGACATGCTTCTGCGCAATCTTGTTCCCCACTCCTCGTAACCCTGAGCACAGTAAGCACCAAACCCGGCACGTATCTCGCCGAAACATCTCGCGGAGGCCTGCTAC # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAAGTCTATCAGGGGAAATGAGAACCAATCCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,13] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,-0.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA //