Array 1 17642-17970 **** Predicted by CRISPRDetect 2.4 *** >NZ_RFEF01000012.1 Acinetobacter haemolyticus strain TG41244 Acinetobacter-baumannii-TG41244_90, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 17642 28 100.0 32 ............................ AGGGTTTTGTGCTATATTGTGGATAGTATTAT 17702 28 100.0 33 ............................ GAAATGACTATTGTGTGGTCTGAAAATGGTCAT 17763 28 100.0 32 ............................ TTCATTTTATTTAAACTTTCTAATGTGTAGCC 17823 28 100.0 32 ............................ AACAGCAATAGTTGGCTTACCGATACTATCTC 17883 28 100.0 32 ............................ GCGATGAAGAAAACCCAAATGGCCTATCAAAC 17943 28 89.3 0 .......................TTC.. | ========== ====== ====== ====== ============================ ================================= ================== 6 28 98.2 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : GGTAAATGCGATTTGTCTTTGTAGATTACTCATCTCAATTGTATCTGCATCCACGATCGTTATTTTGCCTACACCTGCACGAGCAAGTAACTCTGCACTCGTACAGCCGATCCCTCCAGCACCAACAATCAGTACATTTGCCAATTTTAATTTTTCTTGTGCTTCAATATCCCAACCATCTAGTAAAATCTGACGGCTATATAAGTGCATTTCGTCATCAGTTAATTCAAATGTATGCTCTAGATGATCAGACACGTTCCATTATCTCAAAATCGGCTTAGTGATTGCTGATTTTAAGTGGCTAATCTCATTTAGCAAAGCATTTAATGCTTGCTGCATCATTTATTTTGACAAATCAACGGATTTACCCCAATATTTTTATTATTCTTTAACAGTTTAATAAAATCAATATGTTACGAATTAGCATAAAAACTTTGGGTATTGATGTATTTTTCACCACAAGTTAATGTTTTTTCTTAATTTATTTATGCTATTTTATA # Right flank : ATTACGATTTCTTACGATCATGCATCATTTCATAAGTTTGTGCTCTTAATAACTCCTCTTTAGTTGCAAATGAGTTATTTCTAAGCTGGTTTAAAGCACGTTGCTTGCTCGCATCATCAACATCGCTCTTTAAAATCTGATCACGTTGTGACAAATAATTATTTACCCGATTCTGCCAAACCGCTTCTTCTTGATCGACTTTCTCCAAACGATCAGCAGCCTCAACACCCAACAAGCTTTCCCGCATATTCCGCAATTCTTGAGCAGAGCCACCTTTTTCCTTAATTTCTTGTGTCAGTTGCTGTAATTCAGCAAATTGCATCGACACTCGAACACCATCAGCCAAAGTAGGAGGCAATTGATCTATTAACTTTGCTAACTCAGTTGCTTTTTGCTGTGCTGTTAAAGTCTTATTGGCATGTATACGCATTTGATCAATACTGAATTGATTAAAATTTCGTTCATTTCCAAAAAATGCTTGAATTTCTGCCGCATTGAAA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 16805-19593 **** Predicted by CRISPRDetect 2.4 *** >NZ_RFEF01000017.1 Acinetobacter haemolyticus strain TG41244 Acinetobacter-baumannii-TG41244_95, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 16805 28 100.0 32 ............................ AATCAGGGTTAATGCTTGACGGTGTGGCAAGC 16865 28 100.0 32 ............................ TGGAATAGACAGGCAATTTTAGAGAGTGAACA 16925 28 100.0 32 ............................ TGAAACAAGTCTTTTTTCAACTTTGATGTAAA 16985 28 100.0 32 ............................ GAAATCACAAGCGGTGCTGACAATGCTTATGA 17045 28 100.0 32 ............................ ACACAGTTGATTCTGTCAAATCGTTTGAGGGC 17105 28 100.0 32 ............................ GAAAGTGCTGCCAACCGTTTTCGTCCAGTTCG 17165 28 100.0 32 ............................ TATCAAATGCCCTGATCCTGATTTTGCAGATT 17225 28 100.0 32 ............................ TGAAGTCCAAAAAGGAGTCAAACGAGTTGGGT 17285 28 100.0 32 ............................ CGCAACGGTTTTTGTGCCCACGTTGCCAGTGT 17345 28 100.0 32 ............................ TGAAGAACTGCCTTTTATTGATGATGAGCCTA 17405 28 100.0 32 ............................ AGTGACATGAATTGTCCACATAAATTTCACTA 17465 28 100.0 32 ............................ CAATGCACTTTGTGACATTGTAACATAACAAA 17525 28 100.0 32 ............................ AGTACATGGCTTCGTTAAACCAAGATTCTGTA 17585 28 100.0 32 ............................ GAGAAAACTTGTGAATCTCGCATTAAAGCCAG 17645 28 100.0 32 ............................ TTGCGCTTTTAGTTTTGAAGTAGCCTCAAATA 17705 28 100.0 32 ............................ AACGTGTTTGAGTTTTTACCAGCGTTAAGTTT 17765 28 100.0 32 ............................ ACAGCCCCTTATCGGTTTTGCTGATGACGAAA 17825 28 100.0 32 ............................ GAAATCAACGAACGGTGACTAAACGATTATTT 17885 28 100.0 32 ............................ GTTTCTATTATTGAACCATAATGATTGATTAC 17945 28 100.0 32 ............................ TCAAATTTTGAAAGGACATACTGATGCAGATG 18005 28 100.0 32 ............................ TAAAGTATGAAACAATTGATAATGTATTAATC 18065 28 100.0 32 ............................ TTTGACTGTTTTTGTTTTTGGTTTACATAAAA 18125 28 100.0 33 ............................ ATCATAAGCGTTAACATACGAAATAGGATGCTT 18186 28 100.0 32 ............................ TGAAGTAAAGTATTAAATAAAGCCCAGCATTG 18246 28 100.0 32 ............................ AACAAACATGGGCAGTTGTCATTCAATAGAAT 18306 28 100.0 32 ............................ ATCATTATTGCAGCAAATTATAGGACGTGTGC 18366 28 100.0 32 ............................ ATTCAAACCTGCAAACGAGTTAATGACTGCAT 18426 28 100.0 32 ............................ GTGTGACGCATAACGAGAATAGATTCATGCTT 18486 28 100.0 32 ............................ AGTCTTTCGACATTTAGCATATGCAATATTGC 18546 28 100.0 32 ............................ ATCAATGTCCATGATGTATGGAACGGTAAACT 18606 28 100.0 32 ............................ TTTGAAGTGTCTAGCGTTTATGAGTTGCAAAG 18666 28 100.0 32 ............................ ACAAGTGACAGAGCTTATTGCAGGCACTGAAT 18726 28 100.0 32 ............................ TCTCACAATTTTCGACAATTGAAATTCTTATC 18786 28 100.0 32 ............................ AACCTGTATGATCGGCACGATTATTCTCATCT 18846 28 100.0 32 ............................ TAAAACCCCGCACCATAACTTTAAATGGAATT 18906 28 100.0 32 ............................ TAAAGACACAGTTAAGCCTGAATACAATTTCA 18966 28 100.0 32 ............................ GCTTTCGTGCTTAACCCATTTTTGCGCTAAGT 19026 28 100.0 32 ............................ GAATGATTCTGTATAACATTTTATATCATGTA 19086 28 100.0 32 ............................ ATGCGAAAAATGCAGAAGAAAAACCGACCTGA 19146 28 100.0 32 ............................ GCCCAATCATCGAAAATCAAGCCACAAAAACG 19206 28 100.0 32 ............................ ATTATCGAATCCTGTAGCTTGAGCCAATAAAA 19266 28 100.0 32 ............................ AAGCAAACGGCAAGCTTTTGACTTTAGACATC 19326 28 100.0 32 ............................ TGTGAACCTAAGAACATAAACGGAATAATATC 19386 28 100.0 32 ............................ AACTAGCGGCACTACAGAGACATATAGCGGTA 19446 28 100.0 32 ............................ GTCTGAGCGTCAATATTATGACGAAACAACTA 19506 28 100.0 32 ............................ AAGTTATTGCACTAGACATGATCTGCAACAAG 19566 28 96.4 0 ...........................G | ========== ====== ====== ====== ============================ ================================= ================== 47 28 99.9 32 GTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : TTAGATATTCGAAAATGGCTGGAACGTTTAGAAGATTATGTGCATATCACTTCTATTCGTGAAGTACCTAGCGATATTAAAGGCTATGCCATTTACAAGCGTAAGCAAGTGAAAACCAATGCCCAGCGTTTGGCACGGCATCGTATTAAACGTGGCGATATTGGTTTTGATGAAGCATTAGCAAGATATAGCAATGTAGTTACCACAACGAACTTTCCATATATCGAAATGAAAAGTTTGAGCACTTCAGATCAGCAAAGTGAAAAACGTTTTAAATTGTTTATCGAAAAGCAACCTGCTGAAAAAACCGAAACTCAGGTTTTTAGTACTTATGGATTAAGTTCAGTATCATCCGTACCCGAATTTTAACCCAATATTTTTTCACTCTTTAACAGCTTAATAAAATCAATAAGTTATAATAGTAAGTTAATACTTGGGTCTTTTATAGGATTTTAAGCATAACTTGCTGTTATAGCTTTATTTTTGATGTTAAAATTATA # Right flank : GTATTATTTTCAGTTATACTTATCCAAGCGAGATATTCTGTAAGTAATTCTTGTAATAAAAGCCAATTATTTCAGTGAGATAATTGGCTTAAGTGAGAGTTACGATTATCCGCTTATTCGTCGGTCATCCCAATAACACGGTACTACAATCAAGTGGTTCTCATGCAACCGTGACCATAATCGGACACCTAAATCCCGCTGCATATTTTGGACTGTGAAATTGGAAATCAGTAAGGTAGATTTCATATTGTCATAACGACTATATAAGACCTTATGTACCATCTCTAAGCGTTTTTCATGCCGGTCATGCAGGCCATATTCATCAATCACCAATAAATCAAAACTGGAGAAATGGTCGATGACTTCTTTCTCAGAGCGTGAAGTGTCTGACCAGGTATCCATCATTTTTTGAGCAATTTCTGCACTTGTATAATAGCGTGCAGATTTTCTACTGTTATGCAGAATGTTGCGAATGATTGATGCACTCAGATGGGTTTTAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //