Array 1 410-565 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABMIC010000067.1 Blautia luti strain MSK.13.40 NODE_68_length_3040_cov_86.0838, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================= ============================================ ================== 410 23 100.0 43 ....................... TCCGCCATCTTGAGACCACAGATCGCCAATATCGTACTTTACA 476 23 100.0 44 ....................... GGTTTGACTTGATCGTATTGGACATCATTTTAAAAGACTTTACA 543 23 100.0 0 ....................... | ========== ====== ====== ====== ======================= ============================================ ================== 3 23 100.0 44 TTCCAATATGGTTCTATTAATAC # Left flank : CATGAGCATACCTCCATAACTTGAATAGAGTAAAATGCTCGCATCTATCATTTCTGGTAAGAGAAAATGAAGTGAAATGCTTGCATTCTCTAATGATTATTATGGATTGATTTTTAGGGCAACACAATCCGTCGAATTATTTTGCGCTTACAGTGGTTCTTCTACAAATGCCTTTCTGATAAGCATTATTCTACCATTTTCTTTCTTGAATTAACTTGTTAAAGTACTTTAATATTTTTTTACTGGCATCCAAGTAGATGCCAGTTTATAGTTTATACTCTTTTCACAGAACTTTTATCCCAGCTTTCGAGTACCTGACCCCAAGTAGTGCTCTGATGCCAGTTTATGCTCTTTTCACAAAACTTTTATCCCCAGTTTCGAGTACCTGTCCCCAAGAGCAGAATTCCCCT # Right flank : CTCGTCTTCCACAAATGCCTTTCTCATAAGCATTATTCTACCACTTTCTGTCGACCTTGTCATTTCTTATTTTTTCGGGACCCATAATCTTCTATTATGATCCATTAAATCACCTGTTTTTCCTTAATATAAAGGCTTTGTCGACCTCCCACACTTTTCTCCTTATCACAGGTCGACAATTTTCTTTCTCGAATTAACTTATTAAAGTGCTTTAATATTTTTTACTGGCATCCAAGTAGATGCCAGTTTATAGTTTATACTCTTTTCACAGAACTTTTATCCCGGGTTTCGAGTACCTGACCCCAAGTGGTTGTATCACAGGTCGACATTTTTCTTTCTCGAATTAACTTGTTAAAGTGTTTGCTGTTTTTTTACTGGCATCCAGGCAGATGCCAGTTTATAGTTTATACTCTTTTCACAGAACTTTTATCCCTGCTTTCGAGTACCTGACCCCAAGTGGTTTTGAATTTATCTGGTGTATTATCTTCCATCTTTACCTC # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCCAATATGGTTCTATTAATAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 1808-56 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABMIC010000023.1 Blautia luti strain MSK.13.40 NODE_23_length_62163_cov_234.504, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 1807 30 100.0 36 .............................. GAAGCAATCAAAGAACACGAACTGTTTTACGACATT 1741 30 100.0 37 .............................. TTGACATGGCTTTGTTTAAAAGATCAATTGTTTTTCC 1674 30 100.0 36 .............................. GCCGTAGCTTCTGTCCAGAGATGAACCTCAACTGCT 1608 30 100.0 36 .............................. CTAGCGTTAAAAATGACATGGGATATAAAATCTGTG 1542 30 100.0 35 .............................. AGTAATCCGGCGATTGCGTTAACAGTCCATCCCTG 1477 30 100.0 35 .............................. TTCCCTGTTTTGGGTATTTTAAATTATCATAATTC 1412 30 100.0 38 .............................. AAGAAAATATGGTGATTCTCTATGTTTATGTGGCTACC 1344 30 100.0 36 .............................. AAAAGCGTTATCCGTGGACAGAATTAACAGAGAATG 1278 30 100.0 39 .............................. GTAATTAACTTTCTCATTGCTGGCGATTTTCAGATACTG 1209 30 100.0 36 .............................. GACAGAACAGCATTGACAGACTCATTTATTAAGTCT 1143 30 100.0 36 .............................. TCAATCTGAATGCCGATCGCCAATGTTGCGAGCCGA 1077 30 100.0 35 .............................. ATACAGTTATTGAGATAATAGAAATAAATGCAACT 1012 30 100.0 38 .............................. GTGTAAAACTGATCCTAATGCGCTGTGCAGGATACAAC 944 30 100.0 38 .............................. TTTTTTGTAGACCTCTGGGGAGAAACCGAGGGCGGTAA 876 30 100.0 36 .............................. TATATCAGAAAAGCGGCAGAAGTTATTCAAGGGTTT 810 30 100.0 35 .............................. GGAAGAACAGCAGCTGAGAAAGTCACTCCAGTACA 745 30 100.0 37 .............................. GAAGAAGTGGCTAATCCAGCTATCCTCATTGGATATG 678 30 100.0 35 .............................. AAAGACTTCTACGGATACAGGCGCAAGACTGTCGC 613 30 100.0 35 .............................. TGCGATGTATTTGCAGTAAAATCACGTAAAATATT 548 30 100.0 35 .............................. TGCTGCGGATATGTTCATGAGCAAGTACCAGTTCA 483 30 100.0 37 .............................. ATTTGTACGATGTCACAGAAGAACTTTCGGATGCTTC 416 30 100.0 37 .............................. AAGAAAATGACAAAGAAAGAAATCGAAGAGGAGCTTG 349 30 100.0 36 .............................. GTCTTCCGGAAGAAGATCTGATGTACCTGGGCAGTG 283 30 100.0 35 .............................. CAGAACTGGGGCGGCGGTTTCCAGCCACAGGGGCA 218 30 100.0 38 .............................. GTATATAGACGGTTTCCTTGGCGTTCTTGAGGGCGTCA 150 30 100.0 35 .............................. AAAATATCCGGAATGAAAAAAATATACTGGACGAA 85 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 27 30 100.0 36 GTATTAATAGAAACATTGTGGAATGTAAAT # Left flank : GGTGAAAAGGAATATGAAGGATTCAGGATATGGTGGTGAGTTATGTATGTAGTTTTGGTTTATGATGTAAGTCAGCAGGAAAATGGTGCAAAGCGTTGGTCGAAGATTTTTAAGATTTGCAAAAGGTATTTGACGCATATCCAGAATTCTGTTTTTGAAGGTGAGATTTCCAAGGCGCAACTGGCGCAGCTACAGCAGGAGTTAAAGTTGTATATTGATAAAGAACTGGATTCGGTGATTATTTTCAAGTCGCGGCAGGAGAAGTGGTTGGATAAGGAATTCTGGGGGAGGAGAGATGATTCGACAAGTTTTATTTTATGATTGTCGTCCTGTGATGTGGAGAAAAATGCGGGAGGTCGACAATGTAGGGATTTTCCTGGGAAAATGAGGATGTTACAGCTATCTAAAGAAATTTAATTAAATTTAGATAATAATAAAATGACAGGGTTGACAGAAAGTGGTAAGATTGGGGTTGTAAAATGAGCGGTTGTAAGGGATAG # Right flank : TTGTTATTGACCTCTTAAAATAGCGTAATAATGATTACCTTGCGTGTCTCTGGATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAATAGAAACATTGTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 98-655 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABMIC010000106.1 Blautia luti strain MSK.13.40 NODE_108_length_771_cov_175.7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 98 30 100.0 35 .............................. TCCACATACCTCTGTATGATTGGGTCACAGATACC 163 30 100.0 36 .............................. GGCTATAAAGGAATCGTGTTCAAGTGTAGAATCAAC 229 30 100.0 35 .............................. TACTTCCCGATCAGGATCTTGGCAAGGGACTGCCA 294 30 100.0 35 .............................. GAATAGATACTGACGGAATATCGTCTGGTGTCAAA 359 30 100.0 35 .............................. TAGTATAGACCAAACACACCTGTATGGAAACAAGC 424 30 100.0 35 .............................. TCGCTTGCAAAAACTACATGTCCTCCAGATGTGAC 489 30 100.0 37 .............................. TCTTTATGGTGTTCCAGACACAGATGTACGGTAAGGC 556 30 100.0 40 .............................. ATAAGACGGGTTAGGGACTTGGCCTTTCTCAAATCGTATT 626 30 86.7 0 A...........G...A............G | ========== ====== ====== ====== ============================== ======================================== ================== 9 30 98.5 36 GTATTAATAGAAACATTGTGGAATGTAAAT # Left flank : AATCCGGTGACAATTCGTGTGAGCAGTCTGGTGACAGCTCATGAGATCAGTAACAGTAAATAATGAAAGTGACGTAGAGGAATAAGGAGAAATCATGG # Right flank : AAACGAGTTTTCAGAAATACAAGGGAAGTAAACGACCAATATTCCTGAGTATTAATAGCTGAGAGTATGAAACTTTTTCTGTAAAATAATGTTTATAAGGTTCTTCTATGATACAA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAATAGAAACATTGTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 4303-5126 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABMIC010000032.1 Blautia luti strain MSK.13.40 NODE_32_length_33240_cov_88.9797, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 4303 30 100.0 36 .............................. GAAAATTACAAGTGGCTGATATCCAAACTAAAATAT 4369 30 100.0 35 .............................. AAATCCGTTTGAAATACCATGAGCGATAATTTCCG 4434 30 100.0 35 .............................. GCAGCGGATGTTTGACGAATCCAGAGAGAAAGTCC 4499 30 100.0 38 .............................. TGAGGATAAGGCTTATTTGCAGGAGTGTTTGATAAAGG 4567 30 100.0 36 .............................. AAAAGTAAAAAGAAAAAAAGTACAACTCCGGCATCA 4633 30 100.0 37 .............................. AGGTGGAGAAAACAGAGGATGTGTTAGCAAGTATTAT 4700 30 100.0 36 .............................. TCATGATTTCTGACTGTTCATAATCATCAATATCAG 4766 30 100.0 37 .............................. ATAAAATAGGAATAGCCAGAGGGAACATTGGTGCTTA 4833 30 100.0 36 .............................. GCCAATCACGCTGTTTAACGATTCTTCCGGTAGTCT 4899 30 96.7 36 .............C................ AAATCAAAATGATTATCTTCAATTGTCTTTTTCAGA 4965 30 96.7 35 .............C................ GAAATAAGGTTGTACACCAATTCCGTAATGTCAGC 5030 30 96.7 37 .............C................ GCAGTGACAGTTGTAGCTGCTGAGATCATTCTTTTGA 5097 30 90.0 0 .............C...T.......C.... | ========== ====== ====== ====== ============================== ====================================== ================== 13 30 98.5 36 GTATTAATAGAACTATACTGGAATGTAAAT # Left flank : AAGTACGTAAACGGCCTTCCTCTTTATAGGATCAGCCAGGAATTCCTGCGGAATGACATCCATATCTCCAGACAGGTCATGGCAAACTAGATGATCCAGTGTGCAGACAGGTATCTGTGGACCACAGTGGGGTCAGGTACTCGAAAGCTGGGATAAAAGTTCTGTGAAAAGAGTATAAACTGGCATCTGTTTGGACCACAGTGGGGTCAGGTACTCGAAAGCTGGGATAAAAGTTCTGTAAAAAGAGTATAAACTGGCATCTACTTGGATGCCAGTAAAAAAATAGTAAAGCACTTTAAAACGTTAATTTCGGAAAGAAAATTGTCGACCTGAGATAAGGAAAAAAGAGCGGTAGGTCGACAAAGCCTTTATTTTAAGGAAAAACAGGTGATTTAATGGATCATAATAGAAGATTATGGACCCCGAAAAAATAAGAAATGACAAGGTCGACAGAAAGTGGTAGAATAATGCTTATCAGAAAGGAATTTGCGGAAGACGGG # Right flank : TTCGAACAAAAATGAAAGTAACTGTTGTTATTACTTGGATTTCGGTATAGAGAATGGGACGGGCTAGAGGTTAGATAAGATGAATGTAAAGGAATACTTTTACATTCATTTTTATCGCATCCAAATCCCTATTAATAGAGGAATGATTAATGCCTTGATAATTTAAAATATCTGTGGTAGCATAGTTAAAGAATCCTGATAAGCAGGAGGTGTGCTTATGAATGAGCAGTTGCTGAAAATGAATGGTTTATCGATGGAAATTCTGGATGCGTTGTCATTTGAGTCACATATGGGAATTCCATTGAAGAAGAATTTGCATTATTTTGATAAGGATATATTAATTGCTGAATTGATTGAGCTGACTGAGTGGTTGGATGAACTGGAAATCCTTTCAGATATTGCGCTAGATTATAGGATAAAGAGTTTGGATTCCATACTTTTGAAGTATGACCGTTACTATCCAGATCATCAGACGCGGAAAGTATTTAATGATATACTGG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAATAGAACTATACTGGAATGTAAAT # Alternate repeat : GTATTAATAGAACCATACTGGAATGTAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //