Array 1 51676-52499 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAAIGV010000002.1 Streptococcus pyogenes strain K16898, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 51676 32 100.0 34 ................................ ATCAACGACCATTTTTGCATAATAAAAAGCGTCA 51742 32 100.0 33 ................................ ATGAATTGGATAAGGTTTGCCTGATAGTATTAA 51807 32 100.0 35 ................................ AAGAGCTTATAAAGCAGCTCGAAAAATCCTTGAAC 51874 32 100.0 35 ................................ ATGAGGACACAAGTAAGTCCTGACAACAGCACTGC 51941 32 100.0 35 ................................ GATTTGGACAATTGGTAGAAGAGTGGAAGACATCA 52008 32 100.0 33 ................................ AATGCTGTGGCAGGTTTTAATATCGATTACCAA 52073 32 100.0 33 ................................ TGGAAAATTAGCTGGTCTGACCAACCAAGAAAT 52138 32 100.0 36 ................................ GGTGCTAAAACAGTTGTTTGGAACGGACCTATGGGT 52206 32 100.0 34 ................................ TGCCACGAATGGTGCGAGTAGGTGGGATTTGAAT 52272 32 100.0 33 ................................ GAGATGATTATAACAAAAAAGTCCGACGGGAAT 52337 32 100.0 34 ................................ TTAACACCGTCCGTTTTAGGATTTACAGGAGTCG 52403 32 100.0 33 ................................ TGCTACAAGTGACTTGTCATTATTCTTTGTTAA 52468 32 96.9 0 ...............................G | ========== ====== ====== ====== ================================ ==================================== ================== 13 32 99.8 34 GTCTCACCCTTCATGGGTGAGTGGATTGAAAT # Left flank : AAGGCCATACGAGGAGATTTAGAAAGCTATCCACCTTTTATGGTTTAGGAGATGTTATATGATGGTTTTAGTCACTTATGATGTAAATACGGAAACACCTGCTGGTAGAAAAAGATTGCGTCATGTTGCCAAACTCTGTGTGGACTATGGGCAACGTGTTCAAAATTCTGTTTTTGAATGTTCTGTAACACCCGCAGAATTTGTGGATATAAAGCACCGCTTAACACAAATCATTGATGAGAAAACTGATAGTATTCGCTTTTATTTATTGGGGAAAAATTGGCAGAGGCGTGTGGAAACACTTGGTCGCTCAGACAGCTATGACCCAGATAAAGGTGTCTTATTATTGTAAAAATCTCTTGTGCGAAGCTAGCTTTCACAGAAAAACCTTGCTTGCTCGCGCAAAAATAACTTAAAAAAGAAGCGAAATGGAGATAAAAAGGCTTAAAACACCTCTATGTGTGCCATCCGTTTCTCTATAAACTGTGTCATTTGGCGCA # Right flank : GATGAACCCGACCTCTCTTTTAATGAGGTCGGGTTTTTACATGCCTTTAGTCAACCATTTATCTGATAGCGTATCAAATTCAAGTTTTTGCATGTTCTAGTCTATGGTTTGCGCCACTAGCTTTCGGTAAACTAAGGGTAACTTAAGCGAGGAGTTATTTATGACACTATCACTTGTATTAATGGTATCGGTTTTTGGGGCAGGCTTGTTATCATTTTTCTCTCCGTGTATCTTTCCGGTCCTTCCTGTCTATTTAGGCATTTTACTGGATGCAGATGATTCAAAGACGATTACTATATTTGGTAAAAAACTCTATTGGTATGGCATTGTCAAAACTTTAGCCTTTATTTTTGGTCTATCTACTATTTTTGTGATTTTAGGTTACGGGGCTGGTTTTTTAGGAAATATCCTTTATGCGGTATGGTTTCGGTACTTACTGGGAGCCTTGGTCATTATCTTGGGGATTCATCAGATGGGCCTCATTACCATTAAGAGCTTAC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCACCCTTCATGGGTGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.50,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA //