Array 1 29113-28617 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_PZGB01000021.1 Staphylococcus simulans strain SNUC 2167 contig021, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     29112	    36	 100.0	    30	....................................	ACGATTAAACAATAAGTCCAAACCGTGCTT	
     29046	    36	 100.0	    29	....................................	AGAAAGAGAAAAAGCCATTAAAATGTTGG 	
     28981	    36	 100.0	    30	....................................	TGATTAATTTCTCTTTTTTCTTGTTCTGTT	
     28915	    36	 100.0	    30	....................................	CTTTACGTGACGGGGATATTGACCGCCCTG	
     28849	    36	 100.0	    30	....................................	GTAGTCAACAAGCATTTCTCTTTTATTACG	
     28783	    36	 100.0	    29	....................................	AATTTTTCCATGTAGTCGGCAATGTATTT 	
     28718	    36	 100.0	    30	....................................	TCACGCCAACTATCAACTAAAGGTTTCAGC	
     28652	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
         8	    36	 100.0	    30	GTTTTAGTACTCTGTAGTTTTAGGTATAAGTGATTC	                              	       

# Left flank :   ATTATCAAGCGAAAGAAAAGGCGTTTTTGATTTATCTGTATCCAGAAGCGGGTTTAAGTATAAAAGAGCAAATTAGATTTAGAAAAACATTAAATGATCTGCCAATTCCAATAATAGTATTAACAGAGTCCTCATATTTTTTATCAGAGAATATCAAAGGTTTGAACTACTTTATCAACAATATCCAAATGATTACTGAAGAGTTTATTGATGATAGTTACTGGAATGCGCCAATTAATATAGAAATAGAAAAGTTTAAAGAGAGGTTTGAGTATTTGTTTAAAAAATATTGCTCAGTTTTAGAGGTTAATCCTGTAATATCCAACTATACTCTCGGTGATATAATTGTTTTCAATGATTTAGATCTTTATGTAGTTGTTGCATTTTTAAAGTATTGCAAATTAGAGTGTCAACTAGATATTGATCGAACAAAAATTTCTTCAGCATTATCGGCTTATCTATTTTCTTGACTATGATTAAATTATATAATTGTGCTAGAG
# Right flank :  GTAATTCTTTAACTAGTTGTTCTAATACTCGTTTTAGTACTCTGTAATTTTTAAGCAGCTCCGGCTGCTTTATTTAGTTCATTTACGAACATTCCGCAAAGTTTGTTTAGTTACTGTAAATAGGGTTTTTAAAGAAGGAAAGTTTGGTTACGTTAAAGATGAGTAAACTAGATAAACTTAGGAGGCCTATAATGAGAAAAATCGGTATCTTTTTAACAACGTTAGTTGCGGTAGCATTAATTTTTACTGGAATTGAAGACATTGTGAAAGGTGCAGAAGCTCAAGCAGCTAAAGCAGTTACGGGTGAAGTAGTTTCTGATGAATTGGATCCAGACGGTGACGGATGGGCAAATATCGGATTTGAAAATATCAAATTAGATGAACCTTACCAAACTAAGTTAGTTCAATTAACACATCTGAAAGACACTGGTAAAATGTCTACGACTGAATACAATGAAAAAGTTGCTGCATTAATTTCAGAAGCAAGATCAATTGATGCA

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGTACTCTGTAGTTTTAGGTATAAGTGATTC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.44%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGTACTCTGTAATTTTAGGTATAAGTGATTC with 98% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-3.60] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [71.7-71.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,4.87   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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