Array 1 92229-92656 **** Predicted by CRISPRDetect 2.4 *** >NZ_VEBP01000012.1 Bacillus pumilus strain DE0283 NODE_12_length_119625_cov_57.294860, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 92229 32 100.0 33 ................................ TCTGGAACCGTAATCGGTGTGACCATTTTCGTC 92294 32 100.0 34 ................................ GAATTTACAGGGAAAACAAATTCCGACTACTACA 92360 32 100.0 34 ................................ TAAAATGGCATTTATGTTACTTAACAAACTTCTA 92426 32 96.9 35 ...........T.................... AACGCTGAGGATGCACGAGAAGGAAAGAAAGACGC 92493 32 100.0 34 ................................ AATGAACAAATGAAGTGGCAGGATCGTTTGGCCG 92559 32 100.0 34 ................................ ACCGATATTTTGGGTGCTGCTGAATCGAAAAGTA 92625 32 93.8 0 ..................A....A........ | ========== ====== ====== ====== ================================ =================================== ================== 7 32 98.7 34 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : ATGAAAGAAATAGCCGACCGGCTAGGCGAAACGAGACAAAACATCTCAAACATCCACAAAAAAGCGCTCAACAAACTAAAAGAAGAAACAGGGGGAGATGTCCGTGAACGAAGAAAAAATGACGAATGGAGAAATGGAAGAACTCATTGAAACCTTCACACCCATGATCAAAAAGAAACTACAAAACACGGCATATCAAGAAAGAGAAGACCTCGAACAAGAACTCTACATCAAACTCATCGAAAAAGTAGACCGGCTGATTTACCAAGAAGGACCTGGATTTTGGGAGTTTATTGTGGAATATATGACGAAGTTGTAAGAGGAACTGATGGTGCGAATGTGAGGTGAACATAAAATCCTCGGGACATTCGCACCTTTTCATTCGACAAAATTGAGAAAAAATGTATATTTTATGAAGGGGAAAACAAAATTCTTTATTGAAAGTTGTGGATTTTGCCTATCATTTCCTAAAAAATGTTACAATTAGGGCAGAAATCGCA # Right flank : TATGCAGTGACCTCCTGAATGTATGATGAATTGTTGTCGCACCCATATATGAGGTGCGCATGGTTTTCAATGATTGTGTCTTAAACGGTTATGACTACCTTAAAGATCATCTTCTTACAACACCCTCTTTCAGATACAAAATCCATCAAAATAGACTGTTCATTTGTATAGTGAAAACATGACTTTTTGCAGTCATGTTTTTTTCTTCTTCTTTTTCCTAAATAAACCTTAAAAAATCTCAAAATAAGTCGAAATGAAAAGTAGTCATTTAGATTCAAATTTTATCCATTTGTACTGAATGGTGAAGGAGGAATTGGTTTGGGTGAAACGGAGCGAACTGGTAAAGTTGAGCAGCTGATCTTAGAGAATTATCAAAGATTAAACAGCATGATATCAGAAGAAGTGGACTTTGCTTCTAATCATGGCGGGCTGACAGGAGATTCTAGAGAAGTGATGTGGCTGGAGTTTTTTCGGAAAATCATTCCTAAAAAATATTCATT # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 100733-101172 **** Predicted by CRISPRDetect 2.4 *** >NZ_VEBP01000012.1 Bacillus pumilus strain DE0283 NODE_12_length_119625_cov_57.294860, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ============================================ ================== 100733 32 100.0 35 ................................ TCAAATTCCGCCATAAGTCACATCCCACCCCTCTA 100800 32 100.0 34 ................................ CCGATGCAGCCACGCCGACCATCCAATCGCCGTT 100866 32 100.0 34 ................................ TAAAATCACTTGCCTTTGAAGAAAATGTGATCAG 100932 32 96.9 44 ............A................... ATAAGCATTGGAATGAACTAAGAAAAATCGAAAAATCAGTCAAA 101008 32 93.8 33 T...........A................... ACCATCAAATTAATGAATTCAAAAAACTGTGAA 101073 32 93.8 35 ...........CA................... CTTGCTTGGATATGTCGGTTTAGTTGGTGTTTCAG 101140 32 84.4 0 ...........CA......GA......A.... | T [101169] ========== ====== ====== ====== ================================ ============================================ ================== 7 32 95.6 36 GTCGCACTCTATGTGAGTGCGTGGATTGAAAT # Left flank : ATGAGAAAAAATGTATATTTTTCAGGGGTGAAAACTTAATTCCTATATAGAAACTTAAGGGTTTTGACGATCATTCCCTAAAAAATGTTATAATTAGGGCGAAAATCGCAGTCGCACTCTACATGAGTGCGTGGATTGAAATCGCTCCAATCTTCGTGCTTCTTGACGCGATCGACGTCGCACTCTACATGAGTGGGTGGATTAATAATTGCGAAAACATAACTCTGCCTCCTGCCTCAGTAGTCATGAATCTAATTGAATTCAATTGTTGCTGAAATATAAATAAGTATGATTAACAAGTTTCAATAGATTTCATACTAAGAAAAAGTCGGCGCGAATGTGAGGTGAACATAAAATCCTTGGAACATTCGCACCTATTCATTCGACAAAAATGAGAAAAAATGTATATTTTTTAGGGGTGAAAACAAAATTCTATATAGAAACTTGTGGGTTTTGACGATCATTTCCTAAAAAATGTTATAATTAGGGCGAAAATCGCA # Right flank : TTGTGAAAACATAACTCTGCCTCCTGCCTCAGTAGTCATGAATCTAATTGGATTCAATTGTTGCTGAAATATAAAGAAGTATGATTAACAAGTTTCAATAGATTTCATACTAAGAAAAAGTCGGTGCGAATGTGAGGTGAACATAAAATCCCTGGAACATTCGCACCGTTTTATTCGACAGAAATGAGAAAAAATGTATGTTTTTTAGGGGTGAAAACAAAATTCTATATAGAAACTTGAGGGTTTTGACGATCATTCCCTAAAAAATGTTATAATTAGGGCGGAAATCGCAGTCGCACTCTATATGGGTGCGTGGATTGAAATGTGAACACCGTTAAATAAATAATAGTAAAAAGACAGTCGCACTCTATATGGGTGCGTGGATTGAAATCCTGCCACTTCCTCAAAAGTTCTCGTAATCATTGTCGCACTCTATATGGGTGCGTGGATTGAAATATTGTTATGTACAAAACCTTTATCAAGAATGCTGACGCACTCTC # Questionable array : NO Score: 8.89 # Score Detail : 1:0, 2:3, 3:3, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.80,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 101464-101692 **** Predicted by CRISPRDetect 2.4 *** >NZ_VEBP01000012.1 Bacillus pumilus strain DE0283 NODE_12_length_119625_cov_57.294860, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 101464 32 100.0 35 ................................ GTGAACACCGTTAAATAAATAATAGTAAAAAGACA 101531 32 100.0 33 ................................ CCTGCCACTTCCTCAAAAGTTCTCGTAATCATT 101596 32 100.0 33 ................................ ATTGTTATGTACAAAACCTTTATCAAGAATGCT 101661 32 71.9 0 .A........CC...A....A.A...CAC... | ========== ====== ====== ====== ================================ =================================== ================== 4 32 93.0 34 GTCGCACTCTATATGGGTGCGTGGATTGAAAT # Left flank : ATAAGCATTGGAATGAACTAAGAAAAATCGAAAAATCAGTCAAATTCGCACTCTATATGAGTGCGTGGATTGAAATACCATCAAATTAATGAATTCAAAAAACTGTGAAGTCGCACTCTACATGAGTGCGTGGATTGAAATCTTGCTTGGATATGTCGGTTTAGTTGGTGTTTCAGGTCGCACTCTACATGAGTGGATGGATTAATAATTGTGAAAACATAACTCTGCCTCCTGCCTCAGTAGTCATGAATCTAATTGGATTCAATTGTTGCTGAAATATAAAGAAGTATGATTAACAAGTTTCAATAGATTTCATACTAAGAAAAAGTCGGTGCGAATGTGAGGTGAACATAAAATCCCTGGAACATTCGCACCGTTTTATTCGACAGAAATGAGAAAAAATGTATGTTTTTTAGGGGTGAAAACAAAATTCTATATAGAAACTTGAGGGTTTTGACGATCATTCCCTAAAAAATGTTATAATTAGGGCGGAAATCGCA # Right flank : TTTCTGCAAATTATATAAAGTCAAATACTTATCCATATCAAAATCTACACAAATGATTAATCAAAATAATGTACTTTCCCCTAAATCCAAGCCTACACAACAAAAAAAGACTCGCTCACACAGAGCCGAGTCTTAATTTTTTTTGTAGTTTTTCTTCACTGAAAATCCAGCCGGTATAGGAATTTTTGATTTGATGATCCATGTCGATATGGCAGATCGCGACGAAAGGATAATGACCTTTGCTGCGGTAGCGCAAATCAATGAACCGCACCTCATAATGATCCTTGTATTTATCCACTTCCCACCGGTAGACAGGGGAGAAGGAGAGAAAAGCTGAAATGTTTTCGTCTTGTTTGGCAATTTTCATAATTTCTGTGTCAGGGACCGGCACCCGGTTAAAGGTGTCTAAAATGATGATCTCACCATTCATACTGCGTCCAACATGGAAGGAGGATTTACATTTCACGGCAATGCGCCATTGTCTGAACTTCATCGTAGGC # Questionable array : NO Score: 8.51 # Score Detail : 1:0, 2:3, 3:3, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //