Array 1 5553-7900 **** Predicted by CRISPRDetect 2.4 *** >NZ_BDJC01000040.1 Streptomyces sp. JHA26, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 5553 29 100.0 32 ............................. AGCAGCAGCGCCCCGGCCGGCGCCACCACCGG 5614 29 100.0 32 ............................. TGGGCCGCGGTCATCAGGGCGATGCCCAGCAG 5675 29 100.0 32 ............................. TACTACGTAGCGTGGTAGTTCGCTGACGGTCA 5736 29 100.0 32 ............................. CCTCCTTGCCTGCTCCAACTCGCTTGGCGTAG 5797 29 100.0 32 ............................. CCGGTGATCCGCAGATCCCGGAACGAGGAGTC 5858 29 100.0 32 ............................. TCCCCGTCGGCCCCTCCGCCTTGAGCCGGATC 5919 29 100.0 33 ............................. ACGTCGCGGTCGCCGGCGCCGGCGTGGTTGGCG 5981 29 100.0 32 ............................. CCGCTAACCCATAAGACCCGCTAACCCGCCAA 6042 29 100.0 32 ............................. GACACCCTGATGGTGACCAGCCGCACCGTCGC 6103 29 100.0 32 ............................. CCGTCGTGGGACAAGGTTCTCGACGCCGAGGG 6164 29 100.0 32 ............................. GAAGAGATCGACTCGATCATGTCCGGCCTGGT 6225 29 100.0 32 ............................. CGTCGCACCTCGAGTTCGGCAGCTATCCGGCG 6286 29 100.0 32 ............................. AAGCCCCTCACCGGCCCCGCCCGTCTCGGGCT 6347 29 100.0 32 ............................. GGCGTGATCATCTGGCAGCCGGGCGCCGGTCT 6408 29 100.0 32 ............................. TAGTGGGCCGTATGCCGATGGAGGCGACATGG 6469 29 96.6 32 ..............T.............. GCGTCGCCCGGCCGCCAGACGATCACACCGCC 6530 29 100.0 32 ............................. TCCACTTCTCCCGGTTCGTGGACATGGCGCAG 6591 29 96.6 32 ............................T CCGGCGGTGCCGCCGTAGGCGATGGCTCCGAG 6652 29 100.0 32 ............................. CACCGCGCCAGCTGCATCGATCCGGCCCGGGA 6713 29 100.0 32 ............................. TCTCCGGCCTTCACGCCCTGGATGAACGCGAC 6774 29 100.0 32 ............................. GGCACGTAGCCCTCCCCGCCGGTCTCCGGCTC 6835 29 100.0 32 ............................. CGGGAAGTTCGCCGATCGGGTTGGCGCCCGAT 6896 29 100.0 32 ............................. CCGCAGGTGGATCCGGCCCTCGCGGTCGCCGC 6957 29 100.0 32 ............................. GCCCACCAGCTGAAGCTGCTCCTCGACAAGAC 7018 29 100.0 32 ............................. AGCAACCGGCGGCTGAAGGAAGCCGGGTGGCT 7079 29 100.0 32 ............................. TGACGAGCGTCGTGGATGCCTTCAGCAGCACG 7140 29 96.6 32 ............T................ AACGTCGTGGGCGAGGGCCTGGCCCGCGATAT 7201 29 100.0 32 ............................. GGCGGCTGGAAGAAATGCCGGCCGACGCTGTC 7262 29 100.0 32 ............................. AACGTCGTGGGCGAGGGCCTGGCCCGCGATAT 7323 29 100.0 32 ............................. CACTTCGCGGAGATCTTCCGCCAAGCCTTCGA 7384 29 100.0 32 ............................. CCGGCCGCGTGGGGCAACAAGCGCAAGGGGTA 7445 29 100.0 32 ............................. CACACCTGAACGTCGTCACCCTTGGACGTCAT 7506 29 100.0 32 ............................. GCAGCGTGAACAGCGACGACGAGTCGCTCTGA 7567 29 100.0 32 ............................. GAGCAGAAGGTGCGCTCCAAGCTCGGGCTCTA 7628 29 100.0 32 ............................. GTACGGGACGTCAAGCGGAAGCTGCTTGCGGA 7689 29 96.6 32 ...............C............. CAGCGCTTTCTCTGGTTCGTGGACCACTGGGG 7750 29 93.1 32 .............T...........C... CGGCAGGTGTACAGGCCGAATGGCTACCTTGC 7811 29 86.2 32 ........T.....T..A..........G ACGATCCGGACGTCGTCCAGGCCCGCGCTGTT 7872 29 86.2 0 ..........T.......A.....CA... | ========== ====== ====== ====== ============================= ================================= ================== 39 29 98.8 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : CGGCGTCAACCACGACGGGCCCGACGGCTACGGGGACGTGCTCTGGTGACCGTCATCGTCCTCACCAACTGCCCGGCCGGACTGCGCGGCTTCCTCACGCGCTGGCTGCTGGAGATCTCCGCCGGCGTGTTCGTGGGCAACCCCTCGGCCCGGATCCGCGACGCGCTCTGGGAAGAGGTCCAGCAGTACGCCGACCAGGGCCGCGCCCTGCTGGCCCACACCACCAACAACGAACAGGGCTTCACCTTCCGCACTCACGACCATGCCTGGCACCCGATCGACCACGAGGGCATCACCCTCATCCGCCGCCCCGCCCCGAACGCACCCGCCTCCGGCCCAGCACCCCGCAGCGGCCCGCCGTCCGGCTGGAGCAGAGCCTCCAAACGCCGCCGCTTCGGAAGAGGCTGATGCACACCAAGTCCGTTACATCCCATTCGCCGGAATCGAAGAAAGTACTCAAAAACCGCCTCCGGCACTAGTAAACCCACAGCTCACCCAGT # Right flank : CACGCCGGGGGTGCCATCCTGCCCGGCCTGTTGTCCGTGACTTCGGGTGGATGGTCGCCCGCCGGCTGGGACGACCGCAGGGATGTTGCCGCGTCCTAAGCCGCACCCAGCTCGCACCACACGTACTTCCCCCGGTTGCCGTCCCTCGTCAGCGGCTGCCAGCCCCAGACGTCGGCGCAGGCGCGCACGAGGGCCAGGCCCCTGCCGTCCTCCCGCTCCAGCGCGGGGGTGAAGGGCTGCGGAGGCTCCGGCGGTGACGGGTCCGCGTCCCAGGCGCCGATCCGCAGGGTTCCCGTCCCCGTCCAGCACACGCGCAGAGCGGCTGGCCCCTTGGTGTGACGCACGGCGTTGGAGACCAACTCCGTCGCGAGCAGTTCCGCGACGTCGACCAGGCGGATCAGGCCGTGCACGGTGAGGATCAGACGCAGGGTGCGGCGGCAGACGGTGACGGCTCTCGGGTCGTGCGGGATGTACAGGGAGTACTCCCACGGTTCGGTTTC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 33758-32753 **** Predicted by CRISPRDetect 2.4 *** >NZ_BDJC01000062.1 Streptomyces sp. JHA26, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 33757 29 100.0 32 ............................. GGCCCCGGCTGCGGCAAGCCGATCTTGCACAT 33696 29 100.0 32 ............................. CTTCGCCCCGTCCGTCCCTCCGTCCGTTGCTG 33635 29 100.0 32 ............................. GAGGCAGAGCCCCGCCTGGCTGCCATGGAGAA 33574 29 100.0 32 ............................. AACCGCGTCTCGCCGCCGCCCTGGAGCGCCTG 33513 29 100.0 32 ............................. TCGGTAGGCGTGTACGCCGGCCCCGGTGGGCC 33452 29 100.0 32 ............................. TACTACGTCCACCAGCCGATGTACATCGACCG 33391 29 100.0 32 ............................. GTGTATCCGGCGATGACGTTGGGGCGGGTGCC 33330 29 100.0 32 ............................. AACGAGGGACGGCCACTCCTGATGGCGGTCAG 33269 29 100.0 32 ............................. CACCGCACCCGGGAAGCCGACGTCGTCCACGG 33208 29 100.0 32 ............................. CAGGCGCACAACCTGCTGACCGCGTGCACGAC 33147 29 100.0 32 ............................. TCCTCCCAGTGCCTGCGCAGCAGCGTCTCGTA 33086 29 100.0 32 ............................. GCGGCCACCCTCCGCAGGTACTGGACCAGCGG 33025 29 100.0 32 ............................. GCCGCTGCGGCCTCGAGGCGCAGCCGACCGTT 32964 29 100.0 32 ............................. GAGACCGGGTATTTCGACGCGAACTCGGTGAA 32903 29 100.0 32 ............................. AAGACAGCCTCGCCCAGTGCGAAGCCGCCGTC 32842 29 100.0 32 ............................. GAGTCGCGCGGATGGCGGCCCTGCCGGACCCA 32781 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 17 29 100.0 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : AACGCGGGGGTGGCTTTGCCGATGTCGTGCACTCCGGCGAGCCATACGGCGAGAGCGCGGGCGTCCGCCTCACCCTGCGGCAATGCCTCGGCCACCAACCCCCGCACCCCTGCGGGCAGCCACTGATCCCACAACAGCCCGGCAACCGCGGCACTGTCCTCCATGTGCCGCCACAACGGCAGCCATCCGTCGGTGTCACGGTCGTGCTTGGCCCACACCGCCCGCGCCGGCCCCCCGAGCCGACACAGCAGGCCAGCACGGGTGTTCCCCCCAATGCTCATGAGGGATTGATACAGGCAGAGGCCCTCTTCTGGCATCAGAATGAGCAAACAGAGTGATCTACGGACAGAAAACGTCGACAAGCCATAGGGTGTTCGGCCCGCCACCGCCCCATCTCAACGCCCTACAGCCCTGAATGGGAGCTAATGCCCCATTCGCCGGAACCTCCCATACTTGCTGATCTCACGCTCCTCCAGCACTAAGCTCGCAGGTCAGGAAGT # Right flank : AATGAGGGCACCGAACCGGGTGGACGCTGTTGGCGTATTCCGTTGCGGCGTACCGATCGGTGCGAAGGCCGTAGCAACACACCGCCCGTACGGTGTTCTCCCGGGGAACCCCGCCAACTGCCTCTGTAGGGCGGGTCCGGCAGTCGACGGGCGGATTTGTCGGCGGCACCCGGGGGCAGGGGCCTACTTTCCGCGCCTGCAGAGGAGGCTCCGTTCGTCAGGACGTCGCGGAGCAGCCCTGCGGTGGGTCAGCGCCCCCGAGAGGTGAGGATCAGCCGCCGAGATCTCCCGCGGCCCCCCGCAGAGCCGTGAGGACCCTGGCCACGGCGCCGTCCTCGCCCGCGCCCCTGCGGACGGCCGCGACGACGTGCCGGACCGGGCGGTCCGCGTGCAGGGCGCGCATCGCCACGCCGTCGCGCGGCACCGCCGCCATGCGGGGGACCAGGGCGACGCCCATGCCGGCCTCGACCATCGCCAGGATCGCCGTCCAGCCGGCCGCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [36.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //