Array 1 7103996-7102319 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHMP010000001.1 Streptosporangium becharense strain DSM 46887 Ga0374018_01, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 7103995 30 100.0 31 .............................. AAAATGGGTAAGCCGGAACCGTGGGAAAAGG 7103934 30 93.3 31 ............................TC CGGGCCATTCGTCTTGCCGGTTCTGCCTGTT 7103873 30 93.3 31 ............................TC CGGGCCATTCGTCTTGCCGGTTCTGCCTGTT 7103812 30 96.7 31 .............................G GTACGGCCCCAAACTGATGATGGTAGACAGA 7103751 30 100.0 31 .............................. CGCCGACCGTCACCGAGGTGACCGCGGAGTA 7103690 30 93.3 31 ............................TC ATTTAGTACGAAGATGCCTCGCTCATCCTCC 7103629 30 96.7 31 .............................C CGGGGCGGCACATCCCTCGCCGCCCCTGGTC 7103568 30 100.0 31 .............................. ACAGCCACACCCCGAACCCGCGAAACCAGGA 7103507 30 100.0 31 .............................. TCGCGAAGTTCCTGGGGATCTCCCTGGTCGG 7103446 30 100.0 31 .............................. GGGACGGTGTGCGGGTCGCCTACCTGTACGA 7103385 30 100.0 31 .............................. GCAGCCGGACGGACCAGTTCAGGGCCGGTAG 7103324 30 96.7 31 .............................G CCGACAAGCGCGCCTTCCAGGACGCCGTGAC 7103263 30 96.7 31 .............................T CGGACCCGGCGCCCTCCGGGGCCGGGCGCAC 7103202 30 96.7 31 .............................T CAGCACCTCCCCGGAACTCTAGGGACTCCCT 7103141 30 100.0 31 .............................. TGCGCCACATGCTTCCGAAGGCCGCTCTCGT 7103080 30 96.7 31 .............................C GCCCGCCGGGCATGGCCCGTATCAAGGCGGC 7103019 30 93.3 31 ..A..........................C TTGACCGCGCTCCCCGGTGCGGCCCACCTCC 7102958 30 96.7 31 .............................G CCCGGCGGGTAGCGGAAGGGATTTCGGTCAG 7102897 30 96.7 31 .............................C GGCCAGCTTCAGGAGGATCCGATGCGACGCC 7102836 30 96.7 31 .............................G GCGCATGCGGGTCGCCCCCAGGACGGAGGTA 7102775 30 96.7 31 .............................G CGGCGCTGGCCCGCATCGCCGCTCAGGTCAT 7102714 30 96.7 31 .............................C GTCCACACCGAAAAAAGAAGCCCTCCCGAAC 7102653 30 96.7 31 .............................T GTTTCCGCAGGTCAGAGGCGGTTATGTTAGT 7102592 30 96.7 31 .............................G GCGAGGGGCGTGGAACGCTGCGCTGGGTCGA 7102531 30 100.0 31 .............................. CGATGGTGCCGCCGCCCGAGCGCAGGGCCTT 7102470 30 96.7 31 .............................G TCCACACGGCGGCTCCGTCGATGCCCGCGGA 7102409 30 96.7 31 .............................T GGCGCGGACGGTCGCCACGTTGGAGACCGTA 7102348 30 96.7 0 ..........................G... | ========== ====== ====== ====== ============================== =============================== ================== 28 30 97.2 31 GTGCTCCCCGCGCACGCGGGGATGGTCCCA # Left flank : CAGTCCGGCCACCGCGCCGCTGTCGGCCAAGTGGCGCCACAACGGCAACCATCCATCGGTTTCCCGATCATGCTTGGCCCACACCGTACGCGCCATGGACGACAATCCGTCGACGAACCGGCTGCCTGGATGCCTCTCATTGAGCATGGAGCTCATTTAAGGCCATCACCTCCGACAAGATTGTGAAAATCTCAAATTCTTCTCAAATCGAGGGGAGAAAAGGTGGAATATATCCCTTTATGGAAAAAAATCTATCTTATCCGATATATCCATAATCGGCCACACTCCACACATGTGGGATGTCTTCCTCCCGGGAAGCATCACTCATGCGGGGATAGCACCCCGCCCCGATGGTGGCGCTTGCCCACAAGGCGTCAGTCGTGCACCCTGGGACGACTTGGCATCCCAAACACGAAGAGTTGACCATGTCCGAAATGTCGCATTCTTTAATAGTGCTCCAATCACACGCTCACCGTCGATAGTCCCGCAGGTCAGGCAGT # Right flank : CCACCCGCCTGCCGATGTAACAACCTGTCGTTGTCGTAGTCAGTGCGTAAGGGCGGTGTGCGCCGCCGGTCGGGTGGACAGGAGGCTCGGCGGGAACACCGGTATGACCCGCCTCACACCGGGCACGATTCCGCCGCCTCCGGCGTTGACCTCGGGAAAGGACCCCATGGTGGGCTGATCACACAGCCGGCCGCCGTGGCGCGCGTGCTCGGTTCTCTTCGGTGGCGACGGCCGGCGGGAGAGTGTGAGACGGCCTCGCGGGGCCGCAGGAGAAAGGAACGAGGTGGTGGTGTCCGTGTCATCGGACCCCGGCCATAGCAGCACCCGCCCCGGGCGAGGCGGGAACCCGCGAGAAGCCCCGCGACGAGCCTCGCGAGGAGCCCCGTGATGAGCATCGCCCTCGGCCTGCTGGCCGTCCTGATTCTGACCCTGGCCACCGGCTACTTCGTCGCCCAGGAGTTCGCATACGTCACCGCCGACCGCCTCGCCCTGTCGCAGCA # Questionable array : NO Score: 5.51 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.39, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCACGCGGGGATGGTCCCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCACGCGGGGATGGTCCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 7113720-7114298 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHMP010000001.1 Streptosporangium becharense strain DSM 46887 Ga0374018_01, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 7113720 30 96.7 31 .............................T GTTGTTCTCTGTTTTGACGGTCAGCTAAACA 7113781 30 96.7 31 .............................G GCTCGGACGCGGGCACCAGCCTGAAGACGAT 7113842 30 96.7 31 .............................C GCTCGGGCCGCCCTGCGAAGCGTCCCCCGGA 7113903 30 100.0 31 .............................. CCACGTCCGGGCCTGCCCTGCCGCTGATCAA 7113964 30 100.0 31 .............................. GCACCTCGGGTGCGTGCCAACCCGCCGCGGT 7114025 30 96.7 31 .............................C AGTCAGGCAAGAGCGGGCGGACCGCGTTCCT 7114086 30 96.7 31 .....................G........ TCAAGGCGCTCCAGGCGAAGGCGGCGCGCAT 7114147 30 93.3 31 ..................T..........C GAACGGTGGCTTTGAGTTGGTCTGATGCTCT 7114208 30 96.7 31 .............................G TCAAGCGAACCCCCGAACTGATCGACTGGCG 7114269 30 90.0 0 .....................G...C...G | ========== ====== ====== ====== ============================== =============================== ================== 10 30 96.4 31 GTGCTCCCCGCGCACGCGGGGATGGTCCCA # Left flank : ATGGAGATCTCTCCCGGTGTCTTCATCGGAGGCCCGTCGGCGCGGATCCGCGAGGCACTGTGGGCAGAGGTGCGGCAGTACGCAGACACTGGACGAGCTCTCCTCGCCTACAGCACCAATAATGAGCAAGGCTTTGCCTTTGAGACCCATGACCATAAATGGCACCCGGTCGACCATGAAGGTCTCATCTTGATCCGCCGGCCAACGGAGAAACCTGCCAGCCCCTCGGCCACCACTCCCAGCGGCTGGAGCAAGGCGGCAAAGCGCCGCCGATACGGACAACGCTGAGGAACGGCAAACCTGCTCTGACGCACCCGATGCCAGGCATCATCCACCGCAGATCCCCCTAAGTTTGCACTTTATTGTAGGTGTCGCCTGCTATCGAGGCATATCGCGCATATAGTAAGAGATGGAGTATTTCGGAAATATCTGAAATGTACGATTCTTTGCAAGTGCTCGAAATTAACACATGCTCCAGCTAATCATGCAGGTCAGCGAGT # Right flank : GGATCGAGCCGTTGCTTCCGACGGTCGAACGTCGCTATGGCGACTTCGGACGCAAGCGGATCGACGACCGCGAAGCGTTGTGCGGGATCTTGTTCGTGCTCTATATCGCGATCCCGTGGGAGTTCCTGCGCCGGGGGCTCTGGGGTTCGGCTCGGGCATGACCTGCCGACGCCGTCTCAGCGGGTCCGGACAGGTCCCGTTCCTTTTCCCGGCCCGACGGCGTGTCCCGGGAACCGCGCTCCACTGCTGATCGTTTCCCGGGACGATCACATCCATCGATCGGAAAGAGGAAATCGTGGTCTTCAAACGGCTGCTGGGAGCCTTCGGCGTCGGAGCTCCCTCGGTGGACACCGTTCTGGCCACTCCACACGTGCGACCCGGCGAGCCGCTGAGCGGTGAGGTCCGCCTCAAGGGCGGCGACTTCGACGCCGACATCGAGCACATCGCCCTCGGCCTGGTCACCCAGGTCGAGGCCGAGTACGGCGAGGGCGAAGGGGTCG # Questionable array : NO Score: 5.44 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.36, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCACGCGGGGATGGTCCCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCACGCGGGGATGGTCCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //