Array 1 177326-180714 **** Predicted by CRISPRDetect 2.4 *** >NZ_FJEN01000003.1 Legionella pneumophila strain 2531STDY5467458, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 177326 28 100.0 32 ............................ TAGATAATTGTTTTGCACCTGTTGCAAGTCTA 177386 28 100.0 32 ............................ GACAGACCCAAGCTACACTGCTGGTAGAGTTT 177446 28 100.0 32 ............................ AGCTTCACAATCACTAACACACATATTGTGTA 177506 28 100.0 32 ............................ TGTAACCTTGATTCTTGACTATTAAAATCCCC 177566 28 100.0 32 ............................ ATATAAGAACAATCGAAGTTCCAAATGTGGAA 177626 28 100.0 32 ............................ CCAAATTAAGCAGCATTCTTCAATACTTTTAC 177686 28 100.0 33 ............................ CCATATGATACGCAGACAATTGCATTTTTTGCT 177747 28 100.0 32 ............................ TTTTAACAATGCGTTGTTCATTGCGTTTATTC 177807 28 100.0 32 ............................ TAGTATTGTAACTGGTCAGTTTAGGTCTAATT 177867 28 100.0 32 ............................ TTTAGAGATATGTCATTTGTTTGACCATCAGA 177927 28 100.0 32 ............................ TCCAATGAAGAAGCCTAGAGAAACAGACACAT 177987 28 100.0 32 ............................ CACACCCACAATAAACGTCATTGTCTTTGTGC 178047 28 100.0 32 ............................ ATTAGTTATTATTAATCGTGATGATTACCGAG 178107 28 100.0 32 ............................ TCTGAGTTAGAGCAACTTGAAAAACAAATACA 178167 28 100.0 32 ............................ AATAAGTAAGATTTTCCACATCCTGGGCCACC 178227 28 100.0 32 ............................ ATTAAGTCAAATAAAGTTAAGAAATTTAATTT 178287 28 100.0 32 ............................ TTATGGAACGACAGCATGTAAATGGGATACAG 178347 28 100.0 32 ............................ GCTAGTTTTCCAACTTAAACTAATTCCTACTC 178407 28 100.0 32 ............................ AGCAATGAATTTGATAGGCTAGCGGTCATTTA 178467 28 100.0 32 ............................ TATTAATAATATTTTAGAAGATTGGCACATAA 178527 28 100.0 32 ............................ ATTTAAAATCAGGGTGAACCTCAAAAGGAATC 178587 28 100.0 32 ............................ CTCATGACCTTTAGCCGTAGATATAAAAAGAT 178647 28 100.0 32 ............................ TCAACGCCCTGCGCTCAACAGGATTAACCTTG 178707 28 100.0 32 ............................ GACTCCTCAACTATCTGTTCAATTGGTTTAGG 178767 28 100.0 32 ............................ ATCAGCGAGGGAAACATCAGTTCCTCCGGTTA 178827 28 100.0 32 ............................ TATAGAGTCGAATAATACTTCTCCTCAGTTTA 178887 28 100.0 32 ............................ GTGTATATGATTTAACGCTGATTTCATGGGGT 178947 28 100.0 32 ............................ TTAATAGTTGTCTGATTATCTTATAATAAAGT 179007 28 100.0 32 ............................ AGTTTCTATCAGGTATCGGCGGGTAATCATAA 179067 28 100.0 32 ............................ TTTGGACGTTTTATCCTCCACAGTATGCCAGT 179127 28 100.0 32 ............................ TACACTCATAATTGAAAGTAGTGCAAAAATAA 179187 28 100.0 32 ............................ TATGGTGACGACTTAAACGAAGCGTTAAACGC 179247 28 100.0 32 ............................ TACATGCAAAAAGGCGGTAAAGCATGGCAATA 179307 28 100.0 32 ............................ TAAAGCCGCCGGAGCTGTCACTACGTCATTCG 179367 28 100.0 32 ............................ AATAAGATGAAAAGTTGTTGACAAAATGTACT 179427 28 100.0 32 ............................ ATATACCAGCGATAAAGGAGGAACTATTAATC 179487 28 100.0 32 ............................ ATCTAAAAATTGTTGAACAGTTGGAATTGGCT 179547 28 100.0 32 ............................ AACATGGACTAAAATATCAAGAGGCATAGCTT 179607 28 100.0 32 ............................ AAAGAAGAACATAGCCAGCCTACTAGCCCTTA 179667 28 100.0 32 ............................ TTAACAGTTAATCTTTCAACATCAGATAAACT 179727 28 100.0 32 ............................ GTCAGTTGTTCGATAGTTATCGATTATAAAGC 179787 28 100.0 32 ............................ TATAGGCGTGAAACAGAGCGTTTATTGCAGTG 179847 28 100.0 32 ............................ ATATACCAGCGATAAAGGAGGAACCATTAATT 179907 28 100.0 32 ............................ TCATAATTTGGAATTGGGGTAAAATGCTCGCC 179967 28 96.4 32 T........................... AATGTCTGATGGATCGATCATACAAAGCCCAA 180027 28 100.0 32 ............................ TAATGTGCCAACAAAATACAAGTCATTGACAA 180087 28 100.0 32 ............................ GAGATATTATCTTTGAAATCCATTTACCGCAG 180147 28 100.0 32 ............................ GTTTATTCGCCAGTCTCGCACCAGTATGTATT 180207 28 100.0 32 ............................ TTGTACAATGCCATCAGCTAATACATCTGTTT 180267 28 100.0 32 ............................ AAGATGAGACAACGCAGGCCAATAAAAATCAA 180327 28 100.0 32 ............................ ATCTTCAAAATATTCATAATCATTGGATTCAA 180387 28 100.0 32 ............................ AACATGCGCACGAATTAGCCAAGTTTGCAATA 180447 28 100.0 32 ............................ GGTAAGCCTATGTCCTCGACCAGACGGTCATC 180507 28 100.0 32 ............................ AAAAGATGAGGCTACAAAGTCATTAATCAAAA 180567 28 96.4 32 .............T.............. AAATCCCCAAAATCGCATTTGAACTGTAAATT 180627 28 100.0 32 ............................ GTAGGAATATTTATATTGTATGTTGTTGATGA 180687 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 57 28 99.9 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CGGTGTCTCGTAAACAGCCTACAATGAGCCAATCAAAATTGAGGCGGTTAATTAAACGTAACTCCTTGACAGAAGATGAAATCAGGCAATACAAGGCAAAGATGTTTTCCAAAGGTCTGGATAATCCATATATTGAACTTGTGAGCGTATCAAACGGGCAAAGGCACCGACGCTATATTGAGTTTGGCGAATTGTTCAATGAGCCAATTCCTGGCCTCTTTGATCAGTTCGGCCTTTCTAACAGTGCTACTGTTCCATGGTTTGATTAAATTTTAGAACAAGGTAAATTCCTTGAGTTCGATAGGTTAAAGTAAGGAGATATAGTTTGGTCAAATGCTTCAATACTTGATTATTTCGATACTTCTAACGACCAATAAATTTAGTTCTTTAAAAATTTGTCTTAAAATCAATTGGTTATAAATTAGCTGAAAGATATTGGGTAAATCGATTTTTTTCAGCTAACTTTCTGTTGTAACTATTTTTTTAAGATTTATATTACA # Right flank : AAAGCACGTACGTACAGGGTCAGATCTTGCTTTTTGCCTTTATCCATAAAAGACGACAAGCTTGGAATTACCGCTTGATAATTATTTCCCAATGCATTAATTTTCTATCAAAAGGAATTAAGCAAGTCCAGGAACAGCGATGGTAAGACCTTTGCGTATTGAGTATGCTGGTGGGCTCTATCACATCACCAGTCGAGGGAATAGAAAGGAAGCGATCTATTTATCAGATGAAGACAGAGAGAATTTTTTATCTGTTTTGGGTGATGTTTGTTTAAAATATCAGTGGTTATGCCATTCGTATTGTCTGATGACAAATCATTACCATTTACTCATTGAAACTCCGCTCGGTAATCTTTCAAAAGGAATGCGCTATCTGAATGGGGTATACACTCAGAAATTTAATAAATCACACAAGCGAATTGGGCACGTCCTGCAAGGTCGCTATAAATCTATACTGGTTGAGAAAGACAGCTATTTATTGGAGTTGTCGCGTTACATAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //