Array 1 145909-147313 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAHODN010000003.1 Bifidobacterium animalis strain MSK.22.112 NODE_3_length_182116_cov_479.358, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                        	Insertion/Deletion
==========	======	======	======	====================================	=======================================	==================
    145909	    36	 100.0	    37	....................................	GACGATATGGCGCTCAGCGTGGCGGAGTGGGAGGCGG  	
    145982	    36	 100.0	    35	....................................	AAGACCGGCACCGAACGCGACTTCACCATGACCTC    	
    146053	    36	 100.0	    39	....................................	GCCCACCACAACGGCAACGGCGGAGGAACACGCGCCGAA	
    146128	    36	 100.0	    34	....................................	AAGCCGAACTCAATCACACGCATCAAAGCGAACA     	
    146198	    36	 100.0	    38	....................................	GTATTCGCCGTTCGAGAGGAATGAGAGGATGCTGTCAG 	
    146272	    36	 100.0	    34	....................................	TCGCCATTGGAGACGCGACGCAGGATACTATCCG     	
    146342	    36	 100.0	    34	....................................	ACGACAAGCCGCCGCCACCGATATTCACCTGCGA     	
    146412	    36	 100.0	    38	....................................	GGCCGCTTCGGTGACGGGCTGGTTTTTCCACCACACGC 	
    146486	    36	 100.0	    34	....................................	AATCCCAGCCGCAAGGTCTGATGCCGCCTGAAAT     	
    146556	    36	 100.0	    35	....................................	AAACAGGTCAATCAGCGGCGCAGGGAGGAGACGAA    	
    146627	    36	 100.0	    36	....................................	GAGTGAACAACTCACTGTGCGAACCATCGAACCGTT   	
    146699	    36	 100.0	    36	....................................	CGGTTGAGCAGCCACGTGGTGATACTGCTCGCGCCA   	
    146771	    36	 100.0	    38	....................................	CTTGCATCCAACGCGCACAGCATTGCATACGGGTATAG 	
    146845	    36	 100.0	    39	....................................	ATCATCCTCACGGAAATAGTGAGCATCCTCGAGAACCTG	
    146920	    36	 100.0	    36	....................................	GGCCGCGATAGTCCACGAGGCGAACGAAGGCGTTGC   	
    146992	    36	 100.0	    36	....................................	GCTCAAGACACTCACCGACCAGCTCAAGAAGACCGA   	
    147064	    36	 100.0	    36	....................................	CGCGATCGTCACCGACTGCACTGTGTTCGCACTGTC   	
    147136	    36	 100.0	    35	....................................	GCGACACCGAACGCCGCCGCCACAGTCGGGATGGC    	
    147207	    36	  97.2	    35	...................................A	AGGGCCAGCAACGTCGTGGAGATCCATCAGGAGGC    	
    147278	    36	  91.7	     0	...........T.T.....................A	|                                      	
==========	======	======	======	====================================	=======================================	==================
        20	    36	  99.4	    36	ATCTCCGAAGTCTCGGCTTCGGAGCTTCATTGAGGG	                                       	       

# Left flank :   ACGCACTTCAACGATGTGCGCCTGAAGAACTTCATCGAGATGCGGCACTGGGACTCACTGCCAATCGAGCGCGCGGAACTGCTCACGCAGATCGTGAGCAACCTGTTCTACGATGTGGAGCGCCGAACCAGCCTCGAATCGTACTTCAGCGGACTGACCGGCGAAGACGTGCACGCCGCAAAGGCCGTGCTGCAGGCGCGCGGGGGAGACGCGAAGCCCTACGACCAGCCGATGGACTACTGGGCCGAGGTGCTGGGTGTGGGCGATGCGCTCGCAGACGTGCCGGGCGACGCGAAGTGGCCGGAGGTGCGGCAGGGGTAGGAGCTATCCCGTGCGAGGGCTGCATCATGCAGCATAAAGCGGGGAATCTCTCGCATCAATACTTTGTAAGGATTTGTTGAGTTTGTGTAGATAAATCAGTCGTTTGTATCACGTCAATTTGTCTACCTCTCGCAAAAGCGCTTATCAGACTATGTGTATCAGTCTGTATTATGGCTACT
# Right flank :  AATGTACTCCGATTTTTATCTAAGCAAAAATGAAGTATGCTGAGAATAACGCAATGAAGCGAGGTGAAGGGTTGGAAGATACATTACCGATTAGTCTCATATGTGACTTTATCTTTTGTCCACGAAGGGCATGGTTAGAAATCCAAGGTGAGAAGATTGAGTCGTTACAGATGGAGCGCGGTTTTCATGACCATCGTGCAGTGGATGACGCCAACGGTGGCCGCGGGGATACTGACTATAGGGCAGTTAATGTGAATCATCAGGGGTGGGGACTGTCGGGGCGATTAGATGCGGTCCGGTTGAATGAAGACAACGGTGTGATTATCCGTGAATATAAAGCTACACCCGTGCGTAGGAGTATGGATGTGACACATGCCATGCGTATACAGCTCGCCTTGCAGGCTGCATGCATGGAGGATATGGGTTATCGAGTAGATGGGACTGAAATATTCTTTACCTCGCACCATCGGATTGTTCCTGTTGAACTAAGAAAATCCGAT

# Questionable array : NO	 Score: 6.23
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     ATCTCCGAAGTCTCGGCTTCGGAGCTTCATTGAGGG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [6,10] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-7.40,-6.10] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-4] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [58.3-65.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.78,0.37   Confidence: MEDIUM] 

# Array family : NA
//