Array 1 14547-17960 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEKFT010000042.1 Denitromonas sp. IR12 KPDAEFOI_42, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 14547 37 100.0 34 ..................................... AAGGTAAATTGAAGAAGGCCGGGGACACAAGCAG 14618 37 100.0 36 ..................................... CCTGCCAAGACCCTGCCGCGGTCATTGCCGCCGCCC 14691 37 100.0 35 ..................................... AACGATGATGCGGTCGTTTAACCATTTCAATTGCT 14763 37 100.0 35 ..................................... GAGCTTCGGCACCGAGGTATCGACATCCGGCACCG 14835 37 100.0 34 ..................................... ACGCCGTTAAGGCGGCTGGCATGTCCGACAGGGA 14906 37 100.0 36 ..................................... GATTTCTGGGCATGTGCGTTGATGTACGGCGATGAA 14979 37 100.0 34 ..................................... TCAGATACCGCCTTGAGGGGGATGTTGTCCCCGA 15050 37 100.0 34 ..................................... AGCCGATGGGCGAACCGTTCGCCGATGTTGAAAC 15121 37 100.0 34 ..................................... CCGATCGTCGACGAATCTCGCCGCAAGATCGGCC 15192 37 100.0 34 ..................................... GTAGGTGTCGTAATGTTCACCGTCCGTGTCTTGC 15263 37 100.0 37 ..................................... CTTGTCGTCGTACATGACGCGTATCACGGCAATGACA 15337 37 100.0 34 ..................................... ATCTGCTCTCCCGTATTCGCCAAGGGCTTGCGCC 15408 37 100.0 34 ..................................... GACATCATCACCCCCGCACCCGCGGCGGCATACA 15479 37 100.0 35 ..................................... ATCGCGGCACGTCGAACACGCAAAGCATGTCATTC 15551 37 100.0 33 ..................................... ATCTGGGACCCGACCGATCGCCCGCTCAACGGC 15621 37 100.0 36 ..................................... GCCAACGGCGCGGGACGTTCCGACAACGCTGATCGT 15694 37 100.0 34 ..................................... ATGTCTGGCGCAACTTATCCTGACGGGACACCCG 15765 37 100.0 34 ..................................... CGCCGGGCACTTTGGTGACGTGCTTGGTCCCGGT 15836 37 100.0 35 ..................................... CCCAGTCTGTGATCGTGGCGCCAGGCGTCGGCTCC 15908 37 100.0 34 ..................................... CCCTTGTGGCGCACTTGCTCGGCATCAACACTGC 15979 37 100.0 34 ..................................... AGCCGGCTCAACCCTCAACGCTTCTTTTTGAGCC 16050 37 100.0 36 ..................................... TCGTTGACCTCGATAACTGTCTGACCGACGCCGGCC 16123 37 100.0 34 ..................................... ATCAGCGAAGGCGCACAATATGAAATTAACTGAC 16194 37 100.0 40 ..................................... CCCATCGACGGTGGGGCAAGCGGTGGAGGTGGTTGCGCGG 16271 37 100.0 36 ..................................... GCGGTATCCCAGGCGTAACCCTTCAGGCCGAGGCGG 16344 37 100.0 35 ..................................... AAGTTAGCCCGCACGGGCCAGCGCCATCCGTATGG 16416 37 100.0 36 ..................................... TCGGCGACGGCGTCAAGAAGCCCCGCGGCCTCCTGG 16489 37 100.0 36 ..................................... ACCGCCATCCGTACCCACTACGCCGCCGCCACCGAC 16562 37 100.0 35 ..................................... TGTGTGGGAGATAACGCCGTCAAGGGCACCGACGG 16634 37 100.0 34 ..................................... GTCGCTGCATTCGAGATTGCCGGCGACGACGTCG 16705 37 100.0 34 ..................................... GATACGACGACTCTTTTTGTCCAAATCGATTTGG 16776 37 100.0 35 ..................................... AAGATCAACATCGACGGCGGCGCGGTCGAGGAAGT 16848 37 100.0 33 ..................................... TACTTCGGCCTGGCCGTAGTACTGAGGGATGAC 16918 37 100.0 35 ..................................... TGCAACACCACAGCAGGCGCGGTTTCTGTCACGGT 16990 37 100.0 34 ..................................... AGCCAGACGGCAGAGCGCCGGGGCATCTACAACG 17061 37 100.0 37 ..................................... GCCTTGAGCACCATCGGCTCGAAGCTAGCTATTGTCC 17135 37 100.0 36 ..................................... CGTTTTCTTAAAATTCTGTGCTTGACACAAATTCAG 17208 37 100.0 35 ..................................... TGAAGGAGCCGAGGCAATGACCGACCGCGAGAAGA 17280 37 100.0 34 ..................................... AACTTGAGCGCGATCTTTTTGCCGTCGAAGCTGT 17351 37 100.0 33 ..................................... ATCTGGGACCCGACCGATCGCCCGCTCAACGGC 17421 37 100.0 36 ..................................... GCCAACGGCGCGGGACGTTCCGACAACGCTGATCGT 17494 37 100.0 35 ..................................... TCGCTGGCGGCAATTGCTGCACGTCGGCCGTCATC 17566 37 100.0 35 ..................................... CGTTCGACGACGACCCCAGCATCTGGTTTGACGGT 17638 37 100.0 35 ..................................... TTGCGCGTCACACCCAGCATGGGCTCATGCTCACC 17710 37 100.0 34 ..................................... ATCGACCTGCTGCGCAACAAGACCCGCGTCATCG 17781 37 100.0 34 ..................................... AACCCGAACGCGGCGCCGCATGACGATTGCCCTG 17852 37 100.0 36 ..................................... GATGTCGATGGCGCCCGCCTCAAGGCCCGGCTCGAC 17925 36 75.7 0 ................C..-..AC...A..C...CGT | ========== ====== ====== ====== ===================================== ======================================== ================== 48 37 99.5 35 GCTTCGCCCCTCGGCAACGAGGGGCGTGGATTGAAAC # Left flank : GCCCTATCTCACGAGGTAAGCCATGCTGGTCATCGCCTGCTACGACATCAACACCGAAACCCGCGCCGGTCGTCGTCGCCTGCGCCGCGTGGCCAAGGTCTGCGAAGGTGTCGGCCAACGAGTCCAGAAATCCGTCTTCGAATTCCAGATCGACCGGATGCAACTCGAGGCCCTCGAACAGCGATTGCTCTCCGAAATCGAACTCGACGAAGACAACCTGCGCCTCTACCGGCTGCCCGACAGCCGCGGCGCCGAAGTGCGAGAACACGGCACCTTCCGCGCCACCGACTTCGAAGGCCCGCTCGTCTTGTAGAATCGACGACGCGCGAACCCCAAGCGATGGAGAAACCGCCATGAGGTTCGCGCGAGCTACAAGGCCCTGATTCGACAACACTTTGATGATTCGCCCACTCGCAATGCCGACCTTCTCGACACTGCCGGAACGAGTTCGCGCAAGTCAGCATTGCAGCGCCATCAAATCAATCGGTTGTAGATGAAGT # Right flank : TCGTCCCCCATTACCACAGGGCAACCCTACCGCCGGTCGCTTGAGCTTTCACTACCGGCGGGTGTCAATCTCCCCTCTCCGGCACTCTTGTGCCATAGTACTTTCGCTGTATCTGGCAACGATGCCGATACGCTTCACCCATAAAATAAATCAACAAAATCGTCAGGCTGGGGCCTGACCCGCTCGTGCGAGTTCCGGCGGGCGCGAATCGATGGAGATCGCAATGAAGCTTGGACGCTTTGCAACCCTGGGCACGGCGCTGGCGCTGGCTCTGACTTCTTCCCTGGCGGCAGCCGAAACCCGTGTGACGCTAAAGGCGGCCAAGGCGGGGACGTCGTATTACCAGATGGCGGTGCAGATCGGCGAGACGGTGAAGGCGGCCAGTGGTAGCGGCATCATCGTGACCGTGGAGGAGAGCCAGGGCTCGGTGCAGAACGTGATGGAGTCGACCGGGCGCGGCTCGCATTACATGTTCACCTCGCCGCCGGCGCTGGTGGAGA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCGCCCCTCGGCAACGAGGGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-18.50,-16.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : NA //