Array 1 305253-303454 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABRWN010000002.1 Citrobacter braakii strain FDAARGOS_638 chromosome 1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 305252 29 100.0 32 ............................. CCGTCAGATAACGTACCTAAACCCCGCAGACA 305191 29 100.0 32 ............................. TTACGGATAGTGAAATATATTGGGATAATATA 305130 29 100.0 32 ............................. CAGGCGTGTTTACTGTCTTTTAGGTTAACGAT 305069 29 100.0 32 ............................. GCCGTCATTACTTGCAACCTGTTCACCAAAGA 305008 29 100.0 32 ............................. TGCTCGGCCTATGCCGACCTATTCTGTACCAG 304947 29 100.0 33 ............................. CTGTTCGCTCCCATACATAACAGGCCCAACCAG 304885 29 100.0 32 ............................. TTGTTTACCAGGTCGGTGTAGGTCGTGCTCAT 304824 29 100.0 32 ............................. GTGTCTTTTCCCATTGGCTTAAACGCCTTATC 304763 29 100.0 32 ............................. GTTATTAGCCGTGGTGGTCGCGCTTCACAGCC 304702 29 100.0 32 ............................. CCGCTCGCGGGGGCCGATCATATCCGTCAGTC 304641 29 100.0 32 ............................. CTGATAGCATAATTCGTTCCGTTGTTGACGCA 304580 29 100.0 32 ............................. GCGAATACCGCGCGCCAGGTTCGTGACCTGAT 304519 29 100.0 32 ............................. ATGAGCGATTTCATCGATAAACCAATTGATCT 304458 29 100.0 32 ............................. AAATTCGTGTTGCTATCGTTTCGGAGACACTC 304397 29 100.0 32 ............................. TTGATTCTCAAAAATCAGTCAGCTTGACTGGT 304336 29 100.0 32 ............................. GACATCGCCCGCGCGGTAATTACGGTCATTCA 304275 29 100.0 32 ............................. TTACTTTGTTGTGCGGCAACGCCCGTTTTTAT 304214 29 100.0 32 ............................. TGTTTGCATTTTTACAGCAACAGGACGGTGCT 304153 29 100.0 32 ............................. CGCTCCACCGACCCTCAGACACTCGACGTCTG 304092 29 100.0 32 ............................. TTTGAAAGTGCTTTCTTTCGATAATTTGAATA 304031 29 100.0 32 ............................. ACATTGTCGGCGATAAGCTGCGCCTGTTTTAC 303970 29 100.0 32 ............................. GATGTATTTTTCGATTTGAAGTGCGCTAGGCC 303909 29 100.0 32 ............................. CGCCCTTTATCATTGGGATATCGTAGCCGACA 303848 29 100.0 32 ............................. GGCGGCGGTGTTAATTGCAAGCGCGTTTGTAA 303787 29 100.0 32 ............................. AAATGATTCAGCGTGAATCGGAGTTATCGGGG 303726 29 100.0 32 ............................. CTGAAACGCGATCGCGAAGTGGCTCTCTTGCA 303665 29 100.0 32 ............................. CGATTATGAGTTTTAGGGGAAACAATGACTTA 303604 29 100.0 32 ............................. ACGGTCAGTACTTTTTTGACACCGATCATCCG 303543 29 100.0 32 ............................. GCAAATCCACGCTAAACCCGGGCGGCTACGCC 303482 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 30 29 100.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTTGCTGCTGGAGAGATTGAACCGCCTCAGCCTGCACCGGATATGCTGCCGCCAGCGATACCGGAGCCAGAGTCGCTGGGTGATAGCGGTCATCGGGGGCATGGTTAATGAGTATGGTGGTTGTGGTCACAGAAAATGTACCGCCGCGTCTGCGGGGCCGCCTTGCCATCTGGCTACTGGAAATTCGAGCAGGTGTGTATGTGGGCGATACTTCGAAGCGTATCCGGGAAATGATTTGGCAACAGATCACACAGCTTGGTGGTTGTGGAAATGCCGTTATGGCTTGGGCGACTAACACAGAATCAGGATTTGAGTTTCAGACATGGGGTGAGAATCGGCGTATTCCGGTAGATTTGGACGGGCTGCGTTTGGTTTCTTTCCTTCCTGTTGAAAATCAATAGATTACGAGTTCTTTAATAATATGGAATTGTTATCTAAAGGTTGGTGGGTTGTTTTGTGTTAAAAAAATCCTTTTGGAACAAGAGTATAGTTTTAGA # Right flank : GACGCGCTAGAGCAGAATTATTTCCAGATGCTGTGTTCCCCGCTGGCTTGGGGCAAAAATAGCCTTATGACTTCACCAAAAGTGGACTAAGGGTTTTTACCCGCTTTTGCCAGTTCCTTTACCAGCGGCAGCATAATGCGTACCACGTCGCGGCTACGGTGTTCTATCCTGCCCGGTAACGCTTTATCGATATGCTGCTGGTTATCCAGTCGCACATCGTGCCAGCTGTTGCCTGCCGGGAACGAGGCGCTTTTGGCGCGCTGTTGATAGCCATCTTTCTTGCCCAGGTTCCAGTTGGTCGCTTCAACGGAGAGAACGGAAATGCCCGCGTTGTCGAAGACCTCTGCATCGTTACAACATCCAGTGCCTTTCGGATAGTCTTTGTTCAGACCTGGATTGGTGCTGGCAACGATACCGCGACTGTGCGCGATAGCCAGTGCCCGGTCGCGCGTCAATTTTCGCACCGCTTCCGGGGTTTTCTTACCGCTATTGAAATAGAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //