Array 1 60686-60358 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADWNY010000010.1 Acinetobacter bereziniae strain ACIN00204 ACIN00204_contig00010, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 60685 28 100.0 32 ............................ AACGAAAGTACGCAATTTGTTCGCAATGTATT 60625 28 100.0 32 ............................ TGATGAGTTGAATGTTCAAGCGTTTGGTGAAG 60565 28 100.0 32 ............................ AATCAGTTACTTTTTCCCAAAAAGATTTTTCA 60505 28 100.0 32 ............................ AGAGATTCTACCCGACGTCTATAACCCGAATA 60445 28 100.0 32 ............................ TCATTGATGTTAAAGAGGGTTACAGTCCAACA 60385 28 92.9 0 ..C..................C...... | ========== ====== ====== ====== ============================ ================================ ================== 6 28 98.8 32 GTTCACTACCGCATAGGTAGCTTAGAAA # Left flank : TTCCAGAAACAGACTTGGAATCATACATAATTCAAAATTTTATTCTTATAAAAACAATAAGCACTATTTTTGATGAAATTTACGTTATAGCACTCGTTTTATTGAACTTAAATATCATATAAAAATGATCTTTTTTAGCAGTTTATTGAGTTGCAAGGGAAGTATGTATTATCGTTTGCAAGATAAATTAAATTTTAAATATTTGATTGATAAATAAATTATTTTATATGAGGTATGTCGTATGATTCTAAGGAGTGAATCTATTAGAGTTTGTATTATATACTGCTATAACTTGTTGCTGATGAGGCAAAAGGGAACAATTTTGGGAAATATGCTTTTAATAGAATTGCGATTGTTCAAATATTTTAACCCAATATTTTTTTACTCTTTAACAACTGAATAAAATCAATAAGTTATATTGGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTATCACTTTATTTTTTGATCTAAAATTATA # Right flank : AATTGTTAAACCTCTCTGATGATTTTAAAAATTTATAGTTGTATAAATTGTTTATTTTATAGCAATAAAAAAAGCCCACTTGAATGAAGTGGGCTTTTAGAATTTGGCTCTCCAACCTGGGCTCGAACCAGGGACCTGCGGATTAACAGTCCGTCGCTCTACCGACTGAGCTATTGGAGAATCTGCATGCGATTATAAGGATATATCACGAGTGGTCAAGCCTTTGATGTCATCTTTTCTTCATTTTTGACTTGTATGCTTTTTATTTAAACAAAAAAGATCAAAATTAAAAAAATGGATTTGAGTGGTTGCAAAGCGAGAGCTGACTTGTTAGATTAAAAACATAAAGAGCGTTTAAGTTTGACTTAAACCGTGTGGATTTAACCAACTTGCCAGCACTAAAATGGCTAAATAGGAGACAGCGCGATGACGACGCTAACTATTTCTCAAATTTTTGAAAAATTTTCTTTTTATCAAGAAAACTACCTTTCTATCCTGCA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGCATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [83.3-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 83667-81356 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADWNY010000009.1 Acinetobacter bereziniae strain ACIN00204 ACIN00204_contig00009, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 83666 28 89.3 32 .......A..G......T.......... TAGGTTATATATTGTTATAAAATAGAGGTATG 83606 28 89.3 32 .......A..G......T.......... GTTCGTATCCGGTTCGGCTTTGTTTTCCGTGG 83546 28 89.3 32 .......A..G......T.......... GTATGAAACAGAATCAATTATCGTGAGTGATT 83486 28 89.3 32 .......A..G......T.......... ATGTATCAAGAAGGAATCATGTTTATTGTTCT 83426 28 89.3 32 .......A..G......T.......... TAAAATATTTTGCTGTGCTGATAAAGAACCGG 83366 28 89.3 32 .......A..G......T.......... CACCAAACAGTAATGGGAAGTATTGTTTATGA 83306 28 89.3 32 .......A..G......T.......... TATTGGTTAAGTGAAGATTGGCGAAAGAAAAA 83246 28 89.3 32 .......A..G......T.......... ATTGGCTCAGATGGTGCATAAGAACCTTGTGC 83186 28 89.3 32 .......A..G......T.......... CATACCTGAATATAAAAATGAATTTGCGGCTG 83126 28 89.3 33 .......A..G......T.......... GCTATCGCAGTTCGATTAGCAACGGCTTTATCC 83065 28 89.3 32 .......A..G......T.......... ATCCTAGTGATAATGGGCCCAGTCGGTTGGCT 83005 28 85.7 32 .......A..GT.....T.......... GTTAAATGAACCGCTTGTATAACCAGATGGAC 82945 28 85.7 32 .......A..GT.....T.......... TTACGTTCAGATTAAGGCAAGTCCTGCGAAAT 82885 28 85.7 32 .......A..GT.....T.......... ATTCGTAACGCTGAAAAAATGGGGCATGGCTG 82825 28 82.1 32 ...G...A..GT.....T.......... TTCAGTTGCACTTTTAAGCAGAGTGAGAGCTA 82765 28 82.1 32 .......AT.GT.....T.......... TGCCCCAACAATCAGTTATCGGGGAGGTACAA 82705 28 89.3 33 .......A..G......T.......... TAACTTGTACATAGGTACAGATTTAGAGTTGAA 82644 28 89.3 32 .......A..G......T.......... TTCTGGGTATCTTGGATTAATGATTTGAATAA 82584 28 100.0 32 ............................ AATAACAATAAAACTATCTCACACACAGAAAC 82524 28 100.0 32 ............................ TTGTAATGAAATATGCAATTGTAACTTTAAGA 82464 28 100.0 32 ............................ AGAAATCATCACATATAAAAATGGAAAGGGGA 82404 28 100.0 32 ............................ TACAAAAGAACTAGAAAAAAAATCTTTTAACG 82344 28 100.0 32 ............................ TGTGGAATCAGTTTCTGTTTCTTCAGATGACA 82284 28 100.0 32 ............................ CAACCAAAAATATTAACAAGGTGTATATGCAA 82224 28 100.0 32 ............................ ACTAAATAAAAGAAAAAAAGCAATAATGAAAA 82164 28 100.0 32 ............................ TAACGCTCAATTAGTCAATTTAGATGTTACAT 82104 28 100.0 32 ............................ AGTAGATTGGCGTGATTTTCCTAATGGAACAA 82044 28 100.0 32 ............................ CTACAGGTTCAACTGAAGTGAATCCTGAAACG 81984 28 100.0 32 ............................ GTTAAGGTTGGTTTAAAGGATAGAATCGCAAA 81924 28 100.0 32 ............................ AATCACGGGTAATAATTCTGTTGAAGTGCAAG 81864 28 100.0 32 ............................ CTGTTGATCATATGCTGAACATGAATTTTTCG 81804 28 100.0 32 ............................ CTTACGACATTCAACGTTAGGATCGAAAGAAG 81744 28 85.7 32 .......A..G..C...T.......... AGCGCACTGGGTACGTGGTATGCATGTCATTG 81684 27 82.1 33 .......A..G......TC.....-... ATTATGCGTTGTAACGCGCATTTTTATACGTTG 81624 28 92.9 32 .......A..G................. AGTATGATTTTGAACACCTTGTTCTGATAATT 81564 28 92.9 32 ..........GT................ ATAAATTGCAATCGCAATTTCAAGCAGTAAAA 81504 28 89.3 32 .......A..GT................ ACTCTTGAGCCATTTGGATATTCAATCGTTTG 81444 28 82.1 33 .......A..G.....CT......A... AACTACGAACTGATAAGGGGATAGACATATCAC 81383 28 67.9 0 .......A..GT...AATCC....A... | ========== ====== ====== ====== ============================ ================================= ================== 39 28 91.7 32 GTTCACTGCCACATAGGCAGCTTAGAAA # Left flank : TATATGTAATAAGGGTTTTAAGCGAAATCAGTAGCTTAAAGCCCTTTTTTTATGCGTATAATAATATGTGATAATATCAGCCTACTAGGTTTAAATGGTGAAATTAGCCGATCTAGCCGAATAATTTACGTCAAGATTACGTCAAGCTTTTGAGTTTAAGATAATGAAAATACCAAAACCAAGAAAACGTGGTGAAGTTTGTTTTACTAAGAAAATAACGAAATATAAGATTTCTTTATTCTCTAATGATAAAGTAAATGAATGACATTAAAAATATGTGTGAATATTGGAAAATCTTTTACTGATAAGATAAAAGTAGTTGATTTTGAATATAGGCTTAGTTAATCAAACAAATATTCTAAAAATTTCCCCCAATATTTTTAGTTCTTTAATAATTCAATAAAATCAATAAGTTATAATGGTGGGTGAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTATTATTTAATTTTTTGTTTTAAAATTATA # Right flank : TATAAACGCCTTAACATCTTAGCTAAATTTAGAAAAGTACAAACATATGGAATAATTTTTACAGTAAATAGAATATGATAATTTAAATGATAATTATTTGCATTATTAATTGCATTTGAATATTTGGTAAAATACAATGTGCAACAATTCTTACACAATCCCTCCGTAATTTGAGTTGCGTATTAACATGAATAAACAATTAACACTTCAAGCACTATCTCTCTCCATACTCTCAGCAATGTCAATTTCAACATATGCAAACGAGACTTCAGAAGACTCTTCCAAGCTTAAAACGATCGTCGTTACAGCAAGTAGTCAGGCGGTCGATGTTAAAGAAGCACCAGCTAGTATTAGTGTGATTACCAGTGAAGATATAGAAAAACAACCGGTGGGTAGTCTTGGCGAGTTATTAAGTAAAGTACCTGGGGTTACTGGTGGAATTAGTCCTAGCAAAGAAGGCTCTAAAATTAAACTACGCGGTTTACCTGACAATTACACAC # Questionable array : NO Score: 5.34 # Score Detail : 1:0, 2:3, 3:0, 4:0.59, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.49, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCACATAGGCAGCTTAGAAA # Alternate repeat : GTTCACTACCGCATAGGTAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCACATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [30-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [76.7-86.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //