Array 1 1005331-1002842 **** Predicted by CRISPRDetect 2.4 *** >NZ_RBWY01000001.1 Orbus hercynius strain DSM 22228 Ga0244546_101, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1005330 28 100.0 32 ............................ TACTTTTACTACAGATAAAGCCCCATCTCTTA 1005270 28 100.0 32 ............................ ATTTCTGATTAATAAAAATTGTTCGTTTCTGT 1005210 28 100.0 32 ............................ CTCACAGCAGAAACACAAAAATTACTCGCAAC 1005150 28 100.0 32 ............................ GACCCGCGGTACCAGCCTAGTCTTCGGATTGT 1005090 28 100.0 32 ............................ TATTTCTGTAGCCCAAAATTTAACGCCGGAAT 1005030 28 100.0 32 ............................ AGCTGTGATTGAGTTTGATTCAAAGTGGATAA 1004970 28 100.0 32 ............................ TGCGGGGAAAACTTTCGCTAACTCGGGGTATT 1004910 28 100.0 32 ............................ CATGAGGAATATGGAATGCAGCACCAATTTTA 1004850 28 100.0 32 ............................ AACATTAAGAATGCAAGAATTGTTACGGCTTG 1004790 28 100.0 32 ............................ AGAGCTTGTGAAGTTTAATATCGTCTTCTGTT 1004730 28 100.0 32 ............................ AAATTTTATTGTGTCAAAGAAAGTGGCAACAT 1004670 28 100.0 32 ............................ TCTTTAAAAGAAAAATCATTTTCAGAATATTT 1004610 28 100.0 32 ............................ ATTTTAGAATAGTGTAGAACTTCTGCACTTAT 1004550 28 100.0 32 ............................ GTCAACAATAAAATCGGCAGCTTTTCCAAGCA 1004490 28 100.0 32 ............................ GATAAATCTTTTTCGCTCTCTCCGAGATCTTG 1004430 28 100.0 32 ............................ TTGCTGATAAGTTAAATCAGCACGAATTGATG 1004370 28 100.0 33 ............................ AACACTTTTTGATTGATGTCAGACTTAGTAAAC 1004309 28 100.0 32 ............................ AAGGCGTAGTCTATTATTAGCGATATCACTTT 1004249 28 100.0 32 ............................ ATATTATCGTTCTTGTTAATCTCATCTTCGTT 1004189 28 100.0 32 ............................ AATGCGTAATCTATTATTAGCGATATCACTTT 1004129 28 100.0 32 ............................ ACTGTTTTACGTCGCTAGCTAACAACTCTTTC 1004069 28 100.0 32 ............................ ATTCGTTTATGATAGACGAAACAGTAACATTT 1004009 28 100.0 32 ............................ TAGAAGCGCTTCGCTCTCGATACGAGAGAGCA 1003949 28 100.0 32 ............................ AACTCTCTCTAAGTCGACTATAAGAGATACTA 1003889 28 100.0 32 ............................ AAAAGGGGCTTGCGCCCCTAAAAATTAATTGT 1003829 28 100.0 32 ............................ TTTAATTAATTTTCCGAAAAGCGAATTATTTT 1003769 28 100.0 32 ............................ TATCACATCTCAAGCTAAATTTTCTGTAAGTG 1003709 28 100.0 32 ............................ GTATGATTTAGCTTTAGTTTTAATTAGCTTAA 1003649 28 100.0 32 ............................ TAGATCCGCTCTAAGCGTCCAAAATTTTATTG 1003589 28 100.0 32 ............................ TTGTTTAAACTCGATAGTTTTGATTTTTCTAC 1003529 28 100.0 32 ............................ ATTTGCTTGTTATTACACAACATTATGTTACC 1003469 28 100.0 32 ............................ TTTCGAAACATCTACATCGTTTGCTGAAACAT 1003409 28 100.0 32 ............................ AGTTTTGAGTAGCTAATAAATCTCTACTTGCT 1003349 28 100.0 32 ............................ TAAAAAAGCTAAAGTTATTTTCGTTCAGCTAA 1003289 28 100.0 32 ............................ TGTAAGAGTAAATCAATTTCATGATCGTGTTG 1003229 28 100.0 32 ............................ TTGTTTAAACTCAATCGTTTTAATTGATTTTC 1003169 28 100.0 32 ............................ ATAAACATTCAGTACGTATTCCTGTGCCGCGA 1003109 28 100.0 32 ............................ AATCAAACATTGTGTCGGCGACAAACGTAGAT 1003049 28 100.0 32 ............................ AAAAGCAAATAAATACTTTAAGAGTGATACAG 1002989 28 100.0 32 ............................ ACAATACTTGTATTTCTATTTTGAATATCAGC 1002929 28 100.0 32 ............................ AAGCGTAGCTAATCGGAAAAGACAATCGGGTA 1002869 28 85.7 0 ................AT.A....A... | ========== ====== ====== ====== ============================ ================================= ================== 42 28 99.7 32 GTTCACTGCCACATAGGCAGCTTAGAAA # Left flank : AACCATGTTGTTACCAAGACCAATTTACCTTATGTTCAAATGATGAGTTTAAGCTCATCCGCTGGGCAAGATAAAACAAACTTTAAACTGTTTATAGAAAGGAAATCAGCGGAGAACACAAGCAAGCAAGAATTTAGTACGTATGGATTAAGTTCGGATAGTTCGGTACCAGAATTTTAGTCTAAATAGTTTATTGTTCTTTAACAATCGAATAAAATCAATACAATATAATAGCGATGTTAATTGTGAATTTTTAGTTATAAAAAGATTAACTCGCTGTTATCAAGTTATTTTATGGTAGTACCATTTATTGCCGTATCAATAGCGTATTGACTGACCCTGTTTAAATAAAACCCACAAATAAAATTACCCAAAGTTTTTTTTATTTTAAATAATTAAATAAAATCAATTAATTAATTTTTTTCACGTAAACTATGGGTAATTTAAAAATTCGATAATTAACACGTTGTTATTATTTTATTTATTATGTTAAGATTACA # Right flank : ATCCACTTTTTTACCTGTCATTGCGGTTATTTGTTCAATAAGCTAAACAAAAAAAAGCGAACCCAATATGAGTTCGCAAAATAATAAGGAATAGGAAAACAATGAATAATCATTGAAGTTGTATTATTATCTTTTTTAATTATTTTGTCCGTTAAGTAATCGTAATCATTAATTAAAGAAAATGAATAAACATTGTAAATCGAAGTTTTTCTATATATTTTGATTTATATCAAGGTTTTTTAGCATTAAAAAAATGATTATTCCTTATTTGATTGCTTTTATGCTAAAGTTTGGTTGGTGTAGTGCGTTAAATTGTATTTTGTTTGCTTTTTTATCTGGTTTTTATTCGGATTAAAGATATTTATTAATTTATCGGTGACCAATTATATAGTAAGAATACGCCAAAGCATGAATAATCATGCTATTAGCTTATATTTTGTTTAGGGCTCAATGTGCGCATACTGATTTATTTCATCATCACTATTATAAAACTTCTTAGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCACATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCACATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //