Array 1 19733-22653 **** Predicted by CRISPRDetect 2.4 *** >NZ_QWLB01000047.1 Meiothermus granaticius NBRC 107808 strain AF-68 contig_47, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 19733 37 100.0 36 ..................................... GACGTGGTTGGAAAAACGCCGCTCCTTCCCGGAAAG 19806 37 100.0 35 ..................................... CCGGCGGTGGACCAGGATGTACTCCTCCCGCTCAG 19878 37 100.0 38 ..................................... GGGATGACCGTTTCTGGGGTTCTTACTTCTGGAATTCT 19953 37 100.0 32 ..................................... TGGAGCCCTGGGAGGGAGTGGCAAAAACCTAC 20022 37 100.0 35 ..................................... GCGCTGGCCGCAGCGCTCGCACTCCCAGACCCGTC 20094 37 100.0 37 ..................................... GCAGTGATCAAGCACTGGGCGGGGGACGAGGTGGCCA 20168 37 100.0 36 ..................................... GATCACTATGCGCCGACCCGGCCCAAACCAGCCCTC 20241 37 100.0 36 ..................................... TGGGGTTGTTTCTGACCCCTAGGGTGATTGCTTCCC 20314 37 100.0 35 ..................................... CGGTCCATTTACAGGTTTCATTATTTGTTCAACCG 20386 37 100.0 36 ..................................... TTTCCGCTTGCGCTCCAAGCGGAAGCGGCTTGAGCG 20459 37 100.0 37 ..................................... AACCCGTCAGCGGCATAAATCCCCACATCTATTACGC 20533 37 100.0 37 ..................................... CACCAAGAATGGAAACCAGTAGGTGCGGCTTGCAGTC 20607 37 100.0 35 ..................................... TCAATCAGTTGGTGTAAGTCCATCGTGCTGGTGAT 20679 37 100.0 35 ..................................... TGCTTATGCTACTTTGGTATTGAATCCGGCTTTTT 20751 37 100.0 34 ..................................... TACGTCGTTCAGAACGGCATAAATCGGTGTGACA 20822 37 100.0 34 ..................................... CACAGGGATAGCCGCTGAAGCCCCAGGAGCCCCT 20893 37 100.0 37 ..................................... CACCACCTCCCCCGCCGGCGCGCCCAGGCTGCGGTCG 20967 37 100.0 32 ..................................... CCGATGGCCTCCTTTCACCTGGCCTCCTTAGC 21036 37 100.0 36 ..................................... GGATAACTTTGAGCGCCAGGTGCTCGAGCCTTTTGC 21109 37 100.0 36 ..................................... TCGATCATGCACAGCACCGCATTCGCATGTCCAAAC 21182 37 100.0 35 ..................................... ATCAGCGCGTTTTCGAGGCTGGGGCAGGCCCTCGA 21254 37 100.0 32 ..................................... CCGTTGGGCTAATTCATTGGTCGTCTCCCCTC 21323 37 100.0 35 ..................................... GGGATTTTCCCATGTTGCCTGTGGGGTAAGGCTAG 21395 37 100.0 35 ..................................... AAAAGTGTGATTTAGAGGGATCGAAAGTAGTTTCA 21467 37 100.0 34 ..................................... TGCGGTACGCTCTCGGCGGCGACACGAGTTCCCC 21538 37 100.0 36 ..................................... ATCCGGGGGAAGGAGGAAATATGACGTACTACATCA 21611 37 100.0 35 ..................................... TACGAAAGCTTTCTTGTGCGTGGTATTCTCGATGT 21683 37 100.0 33 ..................................... CACATGTAGAACTTTTTGGGTCGCTCCCCGTGG 21753 37 100.0 34 ..................................... CTCCCAGCTCCCCCCGGCTCTTTGTGTACTCTCG 21824 37 100.0 35 ..................................... TTTAGCCCGGGCCCCAGGTTGCGCTCGGGCGAAAG 21896 37 100.0 37 ..................................... GGTAAACCCCGAGGCCGCGTAGATATGGCTGACGTGA 21970 37 100.0 33 ..................................... GCTCGAGCTTGGTTCCCGAGGCAAATGCCTGAG 22040 37 100.0 37 ..................................... ATTGCCATTTTGAATGGGATCAAGAGCAACTGGCAAG 22114 37 100.0 35 ..................................... ACCAGGATTATTTCTATGTTGGTGTTATCGTCCAG 22186 37 100.0 32 ..................................... TTCCAGGACGACCATCAACGCCCCGGACTCGA 22255 37 100.0 37 ..................................... TTGCAGGGCGAACTTGTTCCACAGGTTGTCCCGCCGG 22329 37 100.0 36 ..................................... GAGCGGTCCCCATTGCCGTCCAAAGAGCGGCCACCG 22402 37 100.0 34 ..................................... TCTACAGCGTGCCTACCAATTATCTTTTCCCCAG 22473 37 100.0 35 ..................................... CAGGCCGCGGCGGGCAATGACCTCGAGGGCATACC 22545 37 100.0 35 ..................................... CTGCGGTAGGGCTTTGCCGGGTTGGGCCATTGATC 22617 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 41 37 100.0 35 GTTGCACTCGGGCGAAAGCTCGAGTGAGGATTGAAAC # Left flank : CGACGTCAACGTTACCTCCGAAGACGGCCAGACCCGGCTTGTGCGGGTGGCCAAAGTGTGCAAAAACTACGGCCAGCGGGTGCAGATGTCGGTGTTTGAATGTCGGGTGACGCGGGCGCAGCTCGAGGAAATGGAGGCCAAACTTCTGAAAATCATCGAGCCGGACAAAGACAGCCTGCGAATCTACACCCTGTTGGGTGGCCGAGACCGCTGCCTGCGAGTCCACGGCCAGGACAGGTACACCGATTTTGACGACCCCTTGGTGGTTTGAACCACCGGGCACTTGCTCTATTTGCCGAGGGCCTGTAGCCCCTGGCTGCGCGAACCCCAAGCAAGTGCCAAAACCCAGGGGGGTTCGCGCAAGCCGAGAAATCGGCTAGGGGACATTGAAAACCCGTTTCCCCCCCCACCCTCCGCCACCCTGCGTCGGAACCCCTTTTGGGGAGGTTCGCGCAAAACCCCCCTTGAGCCCTGTCCAGCACGCACGCTAAAATGGGGCT # Right flank : CTGACTTAATTAATTTGGAGCCGAAGGTCGGATTTGAACCGACGACCGCTCGATTACGAATCGAGTGCTCTACCGCTGAGCTACTTCGGCATACTGCCGCAGATGGTTATTCTAGCGGCTCTTTCTGACTACAGCAAGCGTGGTAGGATGCCCGTAATGCGTAAGGATGGTCGGGCGCCCAATGATTTACGCCCTCTCGCAATACGAACCGGTTATGTGAACTATGCCGAGGGCTCGGCCTTGGTGGAGCTGGGCAACACCCGGGTGTTGGTCAATGTTTCTCTTATGGATGGCGTACCGCGCCATGTTTCAGGCCGGGAAGGGTGGCTGATGGCCGAGTATAACCTGCTGCCGCGCTCAACCAAGGAGCGCAAGGAGCGCGAGCGGCAAAAGCTGTCCGGACGTACCGCCGAGATCCAGCGTTTTCTGGGGCGGGCCTTCCGGGCGGCCTTAGACCTTAGCCTGCTGCCTAACAAAACCATCGTGATTGATGCCGATGT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCACTCGGGCGAAAGCTCGAGTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.10,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [36.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0.27 Confidence: HIGH] # Array family : NA // Array 1 11916-10681 **** Predicted by CRISPRDetect 2.4 *** >NZ_QWLB01000042.1 Meiothermus granaticius NBRC 107808 strain AF-68 contig_42, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== =========================================== ================== 11915 34 100.0 41 .................................. TCGCTGTGTAAAGTTGGCGTTCCATTGAATTTGTAGATTGG A [11903] 11839 34 100.0 40 .................................. TATGCAGCTCAGTAGCAGGGAGCCCATCAAAGCCCCCAAC A [11827] 11764 34 100.0 42 .................................. TAATGTTTCTACTGCTATAGCTGGAGCTTCTTTATTTGCCGG A [11752] 11687 34 100.0 37 .................................. TTGGATTGGTGGAGAGATGCCCCACGCCTGGCCACAG A [11675] 11615 34 100.0 40 .................................. TCCGATGGCGTAGGTGTCCAGGGCCAGCTTCTGGCCGCTG A [11603] 11540 34 100.0 40 .................................. TAATAGGTTTGGGGCGTGCCATGGATTACCTCCTTTCCAA A [11528] 11465 34 100.0 41 .................................. TAGAGGGCCGCACCCACGGTTTTGCTCTCCAGCAGCAGCTT A [11453] 11389 34 100.0 41 .................................. TTTATGCACTAGATGGCGATCCTTTTACCGAGCAAGATCAG A [11377] 11313 34 100.0 41 .................................. TCACTGAGGTCAGTTTGGGCAAGGTGTATTCGGACAAGGGA A [11301] 11237 34 100.0 41 .................................. ACAGGTGGGAATCCCCATTGTTCTCCCACCACTCCCCAAGT A [11225] 11161 34 100.0 39 .................................. AAGCTCCACTCTTGGTACTCGAGAATACCGGAACTCCCT A [11149] 11087 34 100.0 41 .................................. TCTAATGGACTTTGCATCGGCAAAAAATGGAAGGAAATCCA A [11075] 11011 34 100.0 42 .................................. TCTTTTCGCTGAGAACCTTTATTATTCTGCCTTCAGTCTTGA A [10999] 10934 34 100.0 43 .................................. CAACTTTTCGCTGAGAACCTTTACGACTTTTCCCTCAGTTTTG A [10922] 10856 33 94.1 39 .....-..............T............. CATCAACCTCAGAACGCCGCCAAACAGACCACCAAAAAA 10784 34 97.1 36 ....................T............. CACAGATTGCCGCCATCGTGCGGCAACACGAGCAGA 10714 34 91.2 0 ....................T...........TC | ========== ====== ====== ====== ================================== =========================================== ================== 17 34 99.0 40 GTCGCAAAAAAATAGCCCCGCAAGGGGATTGCAA # Left flank : CTCTTGCAAAAAAAGGCCGATCTCACCCAGGATAGCGTCCGCATTTACCCCATTGGGGGCACAGTGGAGGTACTGGGGTTAGGCCGCCTTACTGAGAGCCCCGACTACCTGATTCTCTGAAGCCGCGTTACACTCGCCGTTACCCCACTTTCACGGGCTAAAAAACCCATCGCACAGTCCACGCTCCTTTCTGCGAATATGCCACGAATACCCTGCCCAACGCCCTGGAAGCACTTTGGTCAAACGGCCCATTATGTTTTGCGCAAAATGCTATAGTGCTCACGTTGGAGGTTTCCGACGCGCTTCTTGACAGCAAGTTTGGGCGATGCTTATCGCATCGCACCACCACAAAAAATCCAAAAGTGCAGCTTTGTGAGCCTCCATCGCAATAAACCGCACTTTTTGGAGATTTATCCACAAGCAACCTGTGAATAACTGGCAGTTCTCATAAATACCCCCTTTGAGAGCCCTGTACAGAACAGCACTTAACGGGGTATGCT # Right flank : GACGACTGGGGGTAACTTGGGTAGGATGGCGGCTGTGGAAGAACCTGGTTTTCGTGTGCTGATCCTTACAGTTGGTCAAACCCGCGAGCCTTTAGAAACAGCGCTGGCCGAGCATACCCCCAACGGCGTCGTGTTTATTGCTAGCCAGAGCAGCCAGGTTACGGTAGCCCCACTATTGCAGGAATATGGTTCCTCTTTGAAACACTATACCCTGCTGATCGAAGACCCTGAGAGCCTGATCGAGAGCTACCAGATTGGACAGCGGGCACTGGCCAAGGCCTTGGAATGGGAGGCCCGGGTAGTGCTGGCTGATCTTACCGGAGGCACTAAACCCATGGTGGCAGGAGTAATGCTGGCCCTCTCAGGGCAGGGCGTAACCTTCAGCTATGTGGGGGGTGAACGCCGCGATAGGCTGGGCAGAGTAGAAAGCGGATATGAGCGGGTGCGGCTGCTCGAGGACCCCAGCGTGCGTTACGGCCTGCGCGAATGGGAAGGCTTCC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAAAAAAATAGCCCCGCAAGGGGATTGCAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,13] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.20,-7.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA // Array 1 63144-58255 **** Predicted by CRISPRDetect 2.4 *** >NZ_QWLB01000015.1 Meiothermus granaticius NBRC 107808 strain AF-68 contig_15, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 63143 37 100.0 35 ..................................... AGCCGGGGTGGCGGGGATCCACCCCTCCCGGACGA 63071 37 100.0 34 ..................................... CGCAAACCGCTTGATGTTGTTCGCCGCCATGTGC 63000 37 100.0 36 ..................................... CGAGCCCTAGCCAGAATGTTGATGGCCGCAGCCACA 62927 37 100.0 35 ..................................... TAGAAGGGGGGCCGGGGGCCCGTCTGGAGGGTGGG 62855 37 100.0 37 ..................................... GCGCTCGAGCCGTTCGGTCAGGCTCTCCTCCTCCCTC 62781 37 100.0 36 ..................................... CGAGCCCTAGCCAGAATGTTGATGGCCGCAGCCACA 62708 37 100.0 35 ..................................... CGGGTGTTCGACGTGAGCACCGGTTGAACCGAGAG 62636 37 100.0 37 ..................................... AACCCCTCGAGGAAGCCAAACAACAGGCGGCTATTTT 62562 37 100.0 34 ..................................... AGCAAGCGCGGGCAGATTATTTCCCCTAACGACC 62491 37 100.0 35 ..................................... TGTGCTATACTCTCCTTGAGCATTTTCTCCTCCTG 62419 37 100.0 38 ..................................... CTATTTTTTTTGCGACAGCATATCTCCCCTCTCCCTAT 62344 37 100.0 36 ..................................... TTGGAACAAAGCTGGGGATATTTTGCAAGGAATCGC 62271 37 100.0 33 ..................................... CTTTGGGGCTTGCAGCAACTTACGGGCCGTCGC 62201 37 100.0 37 ..................................... GATCACTATGCGCCGACCCGGCCCAAACCAGCCCTCG 62127 37 100.0 34 ..................................... CATGGGCCAGCCCCGGCCACGGGGAGGCATCCTG 62056 37 100.0 34 ..................................... GGGGCTATCTCGGTGTGGAATGGATGCCAGAATG 61985 37 100.0 32 ..................................... CCCCCCACCTGCTTGTACAGCGAGATGCTGGT 61916 37 100.0 35 ..................................... ACGGGCAGGTTTGGAATCTATCGTGCGGCATGGCG 61844 37 100.0 34 ..................................... AGAAGGATAGCCAGGGCTTTAAAGGCTATAGATT 61773 37 100.0 37 ..................................... GAGCGCTACGAGGGTGAGGACACCCGCGACATCCCCG 61699 37 100.0 36 ..................................... GGGGGTCTCGGGATTCGCCGGGTCGTCCCCGGGGGG 61626 37 100.0 37 ..................................... GAGGAGCGCCAGGGGGAGCGAGCCGGGGCCCTTGGCC 61552 37 100.0 33 ..................................... CTGGGCGTCGTTCTGCACGCCTGCCACGTTCAC 61482 37 100.0 34 ..................................... TGGGACGACCCCGAGCCCACGTGGTGGAGAGAGG 61411 37 100.0 35 ..................................... CCGTCGGAGAAGACAACCCCTTCGGCAACCCGACC 61339 37 100.0 37 ..................................... CCCGCCGGGCGATCCCGCCAGGGGGAACCGCCCGCCG 61265 37 100.0 32 ..................................... GGGATATCGGTGTTGAACGCTTTTGCCAAAAT 61196 37 100.0 37 ..................................... CAAGAGTTCAAAAGTCCATTGGAGTCGGCTCATCTCT 61122 37 100.0 34 ..................................... GCCCATCCTCGGCGTAGCTCACGGTGATGTCGAA 61051 37 100.0 37 ..................................... CACTTGCACCGCTCCGGCCTATACCCTGAGCGACCTC 60977 37 100.0 35 ..................................... GGCCAGCAGCGCGTCCAGGGAGGTGTTGAGGTCGC 60905 37 100.0 37 ..................................... GATAGCCCGCGCGTCGGGCTCGTAGATATTGCCCACG 60831 37 100.0 34 ..................................... CCGGGTTTGTGGAGGTGTGGGATGAAGACGAAGA 60760 37 100.0 34 ..................................... TGGCGGTATCCGTCGGCGATGGTTGCCAGCAGGT 60689 37 100.0 35 ..................................... CAGCTCGTCGTACAGGGCGCTGTGGTAGCCCGAGA 60617 37 100.0 36 ..................................... TGGAGTGCACCACGAAGGCGGCCACGTTTTGGGACT 60544 37 100.0 35 ..................................... TACTGGACGGAAGTAGAGATTCGGGAGGTCCAACC 60472 37 100.0 36 ..................................... AGCGGACGCGACATCTCGGAGATCCCCGAGAATCAA 60399 37 100.0 36 ..................................... TTCGCCCCATATGTGGAGCTCCATGCCCACCTCCCG 60326 37 100.0 35 ..................................... ACCAGACCCCGCCCACCTTGGCCCAGACCGCCACA 60254 37 100.0 36 ..................................... CGCATACCGCCACCCCCTCCCCTCGCAACGCCCGCA 60181 37 100.0 37 ..................................... ACTACGACCTGGACGAAGGCCAGCAGCGCGACACCAA 60107 37 100.0 37 ..................................... CGAGGCGCTGCGAAGCTGCTCGGCATGGGGTATGAGG 60033 37 100.0 37 ..................................... GCGGACGTGGTGACCTGCCGGGGGCTGGAGCCCTGGG 59959 37 100.0 35 ..................................... CAGGTCCTCGGGGGGTAGGGGCTCCGGCGGGGGCG 59887 37 100.0 37 ..................................... AAGGGCTTCTCTGCCGGGTGACGCTTGCCCGCCCCCG 59813 37 100.0 34 ..................................... CTAGCGATCACCGGGGCCATCTACGCCGCCTATC 59742 37 100.0 34 ..................................... GGCCGGGGTGCATGGGGGGAAGCCGGACGCGGAG 59671 37 100.0 37 ..................................... GCCAAGATCGCGGTGCGGCTGGCGGATCAGCTCATGA 59597 37 100.0 33 ..................................... AGCTCAGCCCGCAGGCGGTCCAACTCCTGCGGG 59527 37 100.0 32 ..................................... GATCTCCGCTATGACGCCCTCGCCCGCCGCAT 59458 37 100.0 36 ..................................... GCACCCCCCGTCCACGACCAGCCCGCAATAGCATCT 59385 37 100.0 37 ..................................... CAGCGCCGACCCGCTCTCGACCAGGCCGGCCCTCATT 59311 37 100.0 36 ..................................... TCGCCGTCCAGCGTCTTCAGGCTCACGGCCGCCCCC 59238 37 100.0 37 ..................................... GAAATCGGTCTCGGCCAGCTCGTCAGGCGTCCCGTGA 59164 37 100.0 37 ..................................... AATGAACCGGAGCCAGTCCGGTTTATCGCTCGAGGCC 59090 37 100.0 36 ..................................... CACCCGAACCCGGTCATAGGTCGTCCAGAGAGACAT 59017 37 100.0 34 ..................................... GTGCAGGATGCGCTCTCGAGTGATCGCGTATTTC 58946 37 100.0 37 ..................................... GAGACCCTTGAGGTGCCGGCCTCGAGGATCGCGGTAG 58872 37 100.0 36 ..................................... GCGTTCCTGAGCCTGTTTTTTGGCGATAGCAGCCCG 58799 37 100.0 36 ..................................... ACCGCCACCCCGGCTGGCTCGGTAAAGGTCACATCC 58726 37 100.0 37 ..................................... CCGGACGCTCCCCTGGCCCTCGCACTCGGGGCAGGGC 58652 37 100.0 36 ..................................... GAGGTCTATGAGGTACTCATCGACAAACCGCCGTTG 58579 37 100.0 35 ..................................... ATAGACGGCGTCGCGCGAAACCCCCAGCGTGGCCG 58507 37 100.0 34 ..................................... CCGTCGCTCCAGAGCATCGGTCGGCGTTTTTTGT 58436 37 100.0 35 ..................................... ACAAGACAAAATATGGCCTGTATGGGTCTGGTTGG 58364 37 100.0 36 ..................................... AGGGTAGCGTGGGGCCCGACCTTCGCGCTAGGGTAC 58291 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 68 37 100.0 35 GTTGCACTCGGGCGAAAGCTCGAGTGAGGATTGAAAC # Left flank : TGACCGCCGCGGGGGGAGGGGTACACCTGCTGCTGGCCTATATTCTGGGGCTGGCCCTGCCGTTTTTCCTAGTCGCGGCCTTCACCGATCGCCTGCGCCCCTGGCTCCGCCGTATGGCTCGCTTCTCCCATGGGGTGGAGCTGGTAGCGGGGGTCGTGCTGGTGGGGGTGGGGGTTTTGCTGCTCACGGGAGCGTACACCACCCTCAACAGCTTTTTCCTGAAGATCACCCCAGGGTGGCTCCAAGACCTGCTCTAAGCCTTCACAGCCAAAGCGCCCCGGACTCCTGGGCTCATTGCGAGGCTAGTGGGTTCATCACTGCGCGAACCCCAAGCAGGTGCTAAAATTCGGGGAGGTTCGCGCAAGCCGAGAAATCGGCTAGGGGACATTGAAAACCCGTTTCCCCCCCACCCTCCGCCACCCTGCGTCGGAACCCCTTTTGGGGAGGTTCGCGCAAAACCCCCCTTGAGCCCTGTCCAGCACGCACGCTAAAATGGGGCT # Right flank : AAGGCTCAAACCTGGGAAAGCTGGGGCACTGGGCCCTCTGCCGAAGGGCCTCCCACGACCACTGCCGGGGCTATCACCCGCATCTGCACGCGGTCTCCAGGCCGGAAGCTGCACCCGGAGGTTGCATAGACCAAATACTCGCGATTTTCCAGACGCACCCGGTAGGTAAGGTCGTGCCCTTTGAACTCGCGGGCCAGCACCAGGCCTTCTCCGCCGGCCTCGAGCCGCAGGTGCTCCGGACGCAGCGAAAGCATCACCGCCCCGGTGGCCGGTTCTGCCAGGGGCAGCCTGCCCAGGGGGGTATTGGCTTCCCGCCCCAGCGCCTCCCCAGGCAACAGGTTGGTGCGGCCCAAAAACTGCGCCACAAAGGGGGTAGCGGGCCGCTCGTAGACCTCTTCTGGGGTGCCGATCTGCTCGAGCTTGCCCGAGCGCATCACCCCGATCCGGTCGGCAAAGCTCAGGGCCTCTTCCTGGTCGTGGGTGACCAGCACCACCCCGAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCACTCGGGCGAAAGCTCGAGTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.10,-13.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [33.3-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.24 Confidence: HIGH] # Array family : NA //