Array 1 29-535 **** Predicted by CRISPRDetect 2.4 *** >NZ_CVRU01000160.1 Dysgonomonas sp. HGC4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 29 47 100.0 30 ............................................... CATCAAGTGTGTTTTTTGAGACATCAATAC 106 47 100.0 29 ............................................... TTCTTAGCATCTAGAGTCGGAGAAGAATA 182 47 100.0 29 ............................................... ATCTCAGAAGACAGAATAGCAGTTGAATT 258 47 100.0 30 ............................................... CCTGCAAGCCGTATACCTTGCTGAAAAGCG 335 47 100.0 30 ............................................... TAGTCCTCAGGTGACGACTTAGAAGAATGA 412 47 100.0 30 ............................................... AAATTCGCACAACAGAGAGCGCAGGAAACG 489 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 7 47 100.0 30 GTTGTGATTTGCTTTCAAAATTGTATCTTAGTTCATTGAAATACATC # Left flank : AACAAGACCCTGGGAAGAACCCCAGCGAG # Right flank : TAATGCCAATCGGTCATTAAAGCCATGCTGTTGTGATTTGCTTTCAAA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAAATTGTATCTTAGTTCATTGAAATACATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.34%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.90,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [20.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : NA // Array 1 9127-8772 **** Predicted by CRISPRDetect 2.4 *** >NZ_CVRU01000036.1 Dysgonomonas sp. HGC4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 9126 47 100.0 30 ............................................... CAAATCCATACGGGGCGCAACGTCGGATAC 9049 47 100.0 30 ............................................... CCCATAATTCACTATCAGTAGTAAAGATTA 8972 47 100.0 30 ............................................... AGGCGTACCGCCGATTAATACAGATACAGG 8895 47 100.0 30 ............................................... TTATAACGACGTTAACAAGCGTATGGAGTA 8818 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 5 47 100.0 30 GTTGTGATTTGCTTTCAAAATTGTATCTTAGTTCATTGAAATACATC # Left flank : GTTCATTGAAATACATCTAACAGGAGTAATAGCCTTAATAATCATT # Right flank : ATACCATACAGCAAGTATATGTATTTCAACATATTGCAAACACCATTAGCATTTGAAAAATCAATGTATTTCAAATAAAAATCCCGACTTTGATCGGGATTTTTATTTTCTAAAACAATTCAAGTTGTTGAGCTCCTGTTTTTTTTGATTCAGGGCTTTTCCCGTAAAACAGTTCCATCATACCAAACTGTTTATCTGTAATACAGAGTATTCCGACATGTCCTTTTGCCGGAAGAAAATTTTTCACTCGTTTGATATGTACATTAGCATTCTCAACACTCATACAATGCCGTAAATAAGTCGAAAACTGAAACATGGTAAATCCATCTCGCTGTAAGTTCTTCCTAAAATCAGCGTATACTTTTCTATCTTTCTTTGTCTCGGTAGGTAGATCAAATAATACTAGAACCCACATAATACGGTATTGATTTAATCGGTCTTGCTCCATATTACCGATGGATTATAATAATTCGGGATATTTAATTTTACGTAGTTTCCCT # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAAATTGTATCTTAGTTCATTGAAATACATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.34%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.60,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : NA //