Array 1 152-912 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAZTW010000576.1 Streptomyces sp. CJ_13 NODE_576_length_1934_cov_38.670172, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 152 29 100.0 32 ............................. TGATGTTGGTGTCCCCGCCCTGGAACACATAG 213 29 100.0 32 ............................. GCCATCACTGCGTTGAGCACAGCCTGGGCCGC 274 29 100.0 32 ............................. GCAATGCCGGTTCAGCTTGCGTTCCAGGTGGA 335 29 100.0 32 ............................. GCGGCCGCCGGGCCGGGGCCTGAACGTGAACG 396 29 100.0 32 ............................. TCGCTGATCACGGGCATGACTGCCCCCTACTT 457 29 100.0 32 ............................. TCCTCCGTCCGTCTCGACCACCTCGGGAAGGA 518 29 100.0 32 ............................. GCGTGGGCGGCTATTCACTGGCAGTCTGAAAT 579 29 100.0 32 ............................. GCGCTTTCACGCGCGAAGAAGACCGCAATGCC 640 29 100.0 32 ............................. AGCGTCCGCGTCATCGGTCAGGGCAGCGTGCA 701 29 100.0 32 ............................. CCGGCCGCCACCGTCCGGCGCGCGGCCCCGAA 762 29 100.0 32 ............................. ACGCCGGGAGGCGACGTACTGCGCGGCGTGCA 823 29 100.0 32 ............................. AACGCGACGATGCTCGGCGCGACGATTCTCGC 884 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 13 29 100.0 32 GTGCTCTCCGCGCGAGCGGAGGTGGGTCG # Left flank : GCCGCGGACGTGGCCGCTTCGTCTTTGTCCGCCATGACTCATCCGATCCGCCTGGCCCACAGGCCCGAGGCCGAGCCCCGGGCCAGGCTTCCACATCACGGACTTACACGATCTTTCAGACACGCTCTTCTAGAATTGCAGGTCAGGAAGTG # Right flank : GCGGTCTGCAAGTCCATGGACCGCTTCGAGGACTCTCTTGTGCTCCGCGACACCTTCATCGTCAACTTCGTCACCAGCTCCACCAACACCGAAGTCGCCACATGGGGCCCCCGACGCGTCGCAGGCTTGATCGCCCAGATGCAGGCACACCTCGCCGGCGACACCTACCCCGGCACCCTCACGTCCTGACGGCCACACCCCGACCACCAGGAGCGCCAGGCCGCGCACAGTGTCGGCGGGGGCAGCCGCATGGCAGGCAAGGAGGACACCATCGTCGGGCGGCGTCGGACAGCGCCGTATCCCGGCTCTGCGAAGACACCGGGCCCAGATCGCTGGGTGGGTATCGCGCCTGCTCGGCGTCACGTACCCACCCAGCCGGAGCCTGGCCCCTATGTCATCCCGCATGACCTCATCGGCAGATCCGCGGATCCGGCAGTGGACCACGCGCCCAGTGCAGGGCCGCTAGACGGCTTCGTAGCGCCGAAAGGTTGACGCGCTCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGGGTCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGCGAGCGGAGGTGGGTCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [53.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 16810-15013 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAZTW010000098.1 Streptomyces sp. CJ_13 NODE_98_length_25267_cov_33.737232, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 16809 29 100.0 32 ............................. TCGGCGTAGGGCAGGGCGAGCAGGAGCAGCAC 16748 29 100.0 32 ............................. GTCGAGGAGCTCCTCGATGCGCTGTGGCACCC 16687 29 100.0 32 ............................. TTGTCCCAGGTCAGGGGGCGAGGGTAGCCGTT 16626 29 100.0 32 ............................. TCACCACGGCAGGACCGGCCCCAGAAACCACG 16565 29 100.0 32 ............................. TTGTCGCCCGCCCAGTCGAGCTCGGGGGTGAG 16504 29 100.0 32 ............................. GTGAATGCCGGGGTCGGGGGGGGCGTCCTGAT 16443 29 100.0 31 ............................. TTGGGCGCATCCGTGCCGGCCCGAGGCAGAC 16383 29 96.6 32 ............................A CCCCTGGCCTTCCGGGGGGCCGCTCGCGTTGC 16322 29 100.0 32 ............................. TCGAGGGTGTCCCGCTGACGGTCGGTACGAGG 16261 29 93.1 32 ...............CG............ AAACCTTGGAGGGATTGGCTGGTGTCGAGGCG 16200 29 100.0 32 ............................. CTGACCCACGCGACCTGTCCTACCTGGCGTGC 16139 29 100.0 32 ............................. GTCGAGGAAGTGCCCGCCGCGCCGCCGGCCCC 16078 29 96.6 32 .............G............... TCCCGGTATCCCTGCACGGCGGGGTGCACGAG 16017 29 100.0 32 ............................. GCCTCCTACCAGGCCTGGCAGCGCAAGCTCGG 15956 29 100.0 32 ............................. GCCAGCACCCAGCGGTGACCGGGGATGGTGTC 15895 29 100.0 32 ............................. CCGAACGCGGGAAAGATGGCCTCGCTTATCGT 15834 29 100.0 32 ............................. GCAGTTGGCGCGGGCCGCTGGGGGGTGGCGGT 15773 29 96.6 32 ..A.......................... GGCCAGACGGAGGAGTGGGTATCGAGGGGTAT 15712 29 100.0 32 ............................. AAGTCGTCCAGCTCGTTAGCCTTGAGCAGACG 15651 29 100.0 32 ............................. CCGCGGGTGAGCAGGCCGCCCTCGGTAGTCCA 15590 29 96.6 32 ..........G.................. TCCTTGTCCAGGGTCCACGTCAGCAGGTCCGG 15529 29 100.0 32 ............................. TACTTGTAGGCGACGAGCAGCACACCCAGCGA 15468 29 96.6 32 ...........T................. GCAGTCCCCCGCCCCGACGTACCTCGGGGCCA 15407 29 100.0 32 ............................. GAGGACCGCGGCGTAGAGCGGCACGCTCGCCC 15346 29 100.0 32 ............................. CTCCCCGGCGAGCGCCTGGCCGTGCTCACCGA 15285 29 100.0 32 ............................. AACGCCCAGATCTGATCGACGGCCCACTTGAT 15224 29 100.0 32 ............................. GGCAGGCGGGGCACTACGGGCCGGTCGGGATC 15163 29 96.6 32 ..........T.................. CCTCGCCACCTGGTCAACAGTCCCCGCGGTGT 15102 29 100.0 32 ............................. TGGGAGGTCCGACGGGCAATCGTGGCGGACGA 15041 29 96.6 0 ..........T.................. | ========== ====== ====== ====== ============================= ================================ ================== 30 29 99.0 32 GGGCTCTCCGCGCAGGCGGAGGTGGGTCG # Left flank : GAAGTACCCCGGCTCCCGCCGCACCGCCGCGAAAGCCGCGGGAACCTGAGCCTGAAACGGCGGAGTGATCTTCCCGAGATCGTGCAGACCCGCCCAGAACGAGAGGACCTGCCGCGCGTCCGCCTCGGGCAGTTGTAACGCGTCCGCGATACGCGCACGAGCTTTGGAGCCCAGCACCACGTCCCACAGAACGCCGAACACAGCTGCTGCGTCCAGCAAGTGACAAATGACCGGGTAGGGGCGCTCCAGGCCACGCTCCTTCGCCCACAGACGGCAGTCGGGGCCGGCAACACGCACGGGGACGACATCGGGTTCTGTCATGGCATCACAGATAGCAGGCGGCACTGACAACGCACCGATCGGCGAACTCCTGAGGTTGCTGTCCCGTAGGGTTCGGCGTTGTGATCGAACTTGCGGAGGCAGAGGCTCTGACATTCCTCTCACGAGGAGAGCAGGGTCAAGAAACGGCAAAGCCCTCATAGACTGCCTGCTCAGGAAGG # Right flank : CAACCCGCGGATCTCCTGCGGCATGACCGGGAGCAGCACCTCAACCCTCTGAAACGATCTCAGGCCCGTTCTCGGGCACGGGCCTCTTACTGATCGTTTCAAGGAGACCTGCAGATGCGAGACGGCAGCCCCGTAGGCATCCGGCAGGTCGATCCTGGCCACGGCCTCCAGCGAGAGGGCCGGCGCTCCGTCCGGGCCGCCCTGCCACAGCAGCCGGACCTTGCGGGCCCGGTTGAGGCCCGAGCGGTGGAAAGGATTCATGCCGCCGTCGCCGATCGATTCGCACCAGCGGAACAATACCTGGTGCAGCGGAGAGTTGTTCAGCGCGTCGGCGAATGCCTGCACGCCGCGCTCCGACAGCGGGCGCCAGGTGGCCGATGCGTCCACCGGAACGAATATCCCTGTGCGCACGAAGAAGTCGGCGCTCGGCTTCATGTGGTCGTCCGTGGGCAGGTCAGCCGGCGGCAACCGCAGTCCGGCAGCCACAGCCTGGGGCGCGG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGGCTCTCCGCGCAGGCGGAGGTGGGTCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGCGAGCGGAGGTGGGTCG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.80,-11.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //