Array 1 87423-91351 **** Predicted by CRISPRDetect 2.4 *** >NZ_QNSE01000008.1 Marinomonas rhizomae strain CECT 7377 Ga0244644_108, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 87423 28 100.0 32 ............................ AGATTCTGGCTTTGGCCTCCGTTGATCATTCT 87483 28 100.0 32 ............................ GCGCACTACAAACACTTCATCACGACTAGAAC 87543 28 100.0 32 ............................ ATTCAAACGTGGTGTCATCGTCATCACCATTC 87603 28 100.0 32 ............................ AACATAGCGAGTAACAATTGTCCGTTAATCGT 87663 28 100.0 32 ............................ CAGGTCATTATTCAACGTTTTGGGGCTTTTGC 87723 28 100.0 32 ............................ AGCCTGACGCGTTGGTCTACTGACGGATTGAC 87783 28 100.0 32 ............................ TTGTATGGTGTTTAGTCCATAGAGCGCCTCGT 87843 28 100.0 32 ............................ GATCCGTAATTTCGGGCTGAGTCGCATTGTAA 87903 28 100.0 32 ............................ AGATTCTGGCTTTGGCCTCCGTTGATCATTCT 87963 28 100.0 32 ............................ GCGCACTACAAACACTTCATCACGACTAGAAC 88023 28 100.0 32 ............................ TTGATAAATTCAGCTTGCGTTGTGCCCGACCA 88083 28 100.0 32 ............................ GAGTTTTTATTGGTAGATAACACTTATCAAAA 88143 28 100.0 32 ............................ AATTGCCGCTACATCATTAGCAGTAACACCGC 88203 28 100.0 32 ............................ AATGCGCCATTTTCGGCAATCGCAAATTTCGC 88263 28 100.0 32 ............................ ATTCCGTGACCCTGATTTTCTAACAGCGTGAT 88323 28 100.0 32 ............................ CACAAATAACGATTGGGGTGTTTTTGATAATA 88383 28 100.0 32 ............................ TACTAACCCTGTACATATATTGTAGCTCTGTG 88443 28 100.0 32 ............................ TACACCATCATTCAATCTAACTAACCCCGCAT 88503 28 100.0 32 ............................ TATCGCTCGATTCATGTTGAACAATTTTGACA 88563 28 100.0 32 ............................ AATGAGTTAACGTATCAGCCTGGCATAACCAC 88623 28 100.0 32 ............................ AAAGCGCAAGAAGAAGCCCAAGCGCAAACAGA 88683 28 100.0 32 ............................ AGCGCAAAGGGGACGAAAATTATCAACATACT 88743 28 100.0 32 ............................ TCATAGAACTTACTGACTCGTGACCCTGACTT 88803 28 100.0 32 ............................ CGTCAAAAAAATAGTATTTCACACCCAGATCC 88863 28 100.0 32 ............................ ACATATTGAAAATTCGAACATCAGAATCATAA 88923 28 100.0 32 ............................ AAGGAAGGCTGGCGGTTTTTACGGACTGACTA 88983 28 100.0 32 ............................ TAGTAACACCAAACATTACTGTCGGAGGCTAC 89043 28 100.0 32 ............................ GTGGTGAAACCGTTGTTTATTTGTCCGGTAGC 89103 28 100.0 32 ............................ TCAATATAAAGCCCGCCTTCGCGCTCTTCCAG 89163 28 100.0 32 ............................ GCGTTACGAGTGATCGCATTTAACGCACTCTC 89223 28 100.0 32 ............................ ACGATCATATCCACATATATTGGTCGAGAGAA 89283 28 100.0 32 ............................ TCGAAATTTCGAATCTTATATTGAGATTGAAA 89343 28 100.0 32 ............................ ATTGCAGTGGCAACGGACGGGCAAAACCTAAT 89403 28 100.0 32 ............................ AATGCTGACCGAGTGCAACAAATGGCCATTGC 89463 28 100.0 32 ............................ TTTGCTTACGTTGTTGATTGTGTGGCGTTCAA 89523 28 100.0 32 ............................ GCGGGCTTGCCTGCGTCGTCGCAACGGGTTGG 89583 28 100.0 32 ............................ GCCGAGCCGCCTTTGTTTTGAATGGTGACACT 89643 28 100.0 32 ............................ AAGCGCTTCAATCTATTGAAAGTTTGGTTGGC 89703 28 100.0 32 ............................ AGCGTATAACTGATCGTGCCTACGTTTTCGTT 89763 28 100.0 32 ............................ AACATCAAAACAGACGCAGCGGATAACATCGG 89823 28 100.0 32 ............................ GTTGTCTTTTAAAACGTCTTCAAAATCGCTCA 89883 28 100.0 32 ............................ ATGATGGAAAAATACAAAGGCCATTTCGTAGA 89943 28 100.0 32 ............................ ACTCGACAGCATCGTCTTTTACGGTCTCAACT 90003 28 100.0 32 ............................ TGCTTGATTTGACGTTGTGCCGCCTCCTCCGC 90063 28 100.0 32 ............................ GATTACAATTGAAGACTCAGTGAACGAAGACA 90123 28 100.0 32 ............................ GTTGAGATTGGTGAATTGAATGTAATGGTCTT 90183 28 100.0 32 ............................ GTGTAGCGTTGTATACCCGCCCACCCGAATCG 90243 28 100.0 32 ............................ AGACTAGGATCTAGAGTCTGGCAGACTAGAAA 90303 28 100.0 32 ............................ AGTAAGCTTAGCAAGATCGCTGGGCACTCTAC 90363 28 100.0 32 ............................ TCCCAGCGCTGGCGGGCTTCTTGATCCGCATT 90423 28 100.0 32 ............................ GAAGTCTGCATGGAAAATACAAGAGCGTATCG 90483 28 100.0 33 ............................ CTTTTTCTCTTTCTCCCAGGCCTCAATTTGCTC 90544 28 100.0 32 ............................ TTTTTTTGTCAGAGTAAAAAAAGGTGGTAATC 90604 28 100.0 32 ............................ AAGATCAAGCCGCGCAAGGCCTAGCAGTAGAA 90664 28 100.0 32 ............................ AAATACATCAGGCTGGGTGATGAAATATTGTC 90724 28 100.0 32 ............................ AATACAGGGTGCGTTCACACTCAAAACAACTT 90784 28 100.0 32 ............................ CAGAAAACATGAATTGTGATCCGTTCTTTTTC 90844 28 100.0 32 ............................ TCGCGGCCCGCAAATTCATTAGCCATTTTAGT 90904 28 100.0 32 ............................ TTTTAACAGCTGTGCGTCGCCTTCAAGGTCTA 90964 28 100.0 32 ............................ TACATTCTTCAGATTGATCGCTCTGATTGCTT 91024 28 100.0 32 ............................ GTCAAAAACGTCAGCCCACGCCACGCGATCAC 91084 28 100.0 32 ............................ GCTACTGGATTCATTACGTTACCGTCAGCATC 91144 28 100.0 32 ............................ ATCAAGCGTGGCCGAGCCATACAAATAGTATA 91204 28 100.0 32 ............................ AACGATTACTGGATGCAAAGCGGTGTCGACAG 91264 28 100.0 32 ............................ TGACCGATTCCCGCGCGCTTTCTGTTAAGCGG 91324 28 92.9 0 ........T....T.............. | ========== ====== ====== ====== ============================ ================================= ================== 66 28 99.9 32 CTTCACCGCCGAACAGGCGGCTTAGAAA # Left flank : CGCGCCTTCACCGCCGAACAGGCGGCTTAGAAATAGCTGGACGTTCTTGTAGTGACGAGCAAGTCCTTCACCGCCGAACAGGCGGCTTAGAAATGACTTTGTCGTGGGTATGCCCGTCTTTCTAGCTTCACCGCCGAACAGGCGGCTTAGAAATGTTAACAACCAATTAACACTTACACCCTTCGCTTCACCGCCGAACAGGCGGCTTAGAAATTGTATGGTGTTTAGTCCATAGAGCGCCTCGTCTTCACCGCCGAACAGGCGGCTTAGAAAAACATAGCCAGCAACGTGTTTTACATATTCGCCTTCACCGCCGAACAGGCGGCTTAGAAAAGATTCTGGCTTTGGCCTCCGTTGATCATTCTCTTCACCGCCGAACAGGCGGCTTAGAAAGCGCACTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGC # Right flank : ACTTAATTGCTATAAATATCTAGCGCTACAGCTCTTCACTGATGCGGTAGGTAGAAACTGTATGTATCATGGCTGGAGTGTAATTTAATATGGAGGGGGCGAAGAGGTTCCCCTTGCCTTAGTGTGTGGGTAAAAGTCTGTAGTTTAAGGTGAGTGCTGTGATCGGTCTTTACTAATGTGTTGTTTTATCTCCATTGGCTTGCTTGATCCTTTTTGTTATTGGAAGGTGATATGACGGTTTTTTACAGGGTCTGCAGGTAGGTAAATCCGTATTACTTTGTTGATCGTTTTGTGAAATTCATTAGTTTTTAAAGTGAGGTATTTTACTTCTCTATTATTCTAATTTTTAAAATGAAATTTTAGTGAGTGTGCAGTGAGAAAAGGTATAAATAGAGTATTGCCATGCTAGAGCAAGAAGCGAAAAAGAAGGTAGATAGAATAAATATTTTTAAACTGGTTGTTTCTCAGTTTTTAATCAACTTAGGGGATGTTCTGATTAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACCGCCGAACAGGCGGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACCGCCGCACAGGCGGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.50,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //