Array 1 45536-43376 **** Predicted by CRISPRDetect 2.4 *** >NZ_MBMB01000046.1 Neisseria meningitidis strain P4464 00001.P4464_scaffold5.1.0.53477, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 45535 36 97.2 30 ........G........................... GGACGGCGGTTCTAAAATATGAAAACTCAA 45469 36 100.0 30 .................................... TATCATGATGAGCATATTTATGAAGAGGTA 45403 36 100.0 30 .................................... CTGGAAGACTGGTAAGAAACGAGATGCACA 45337 36 100.0 30 .................................... TAATTTGCGTTTCGTGTCGCTCATAAACCC 45271 36 100.0 30 .................................... CGTAACCGGCAAGGCTTATTTGTCCAACGA 45205 36 100.0 42 .................................... GCCCACACGCCGCCTAGCACGCCGCCTAGCACGCCGCCGAGA 45127 36 100.0 30 .................................... ATAAATCAATACCGTGAAAACCTCATGTGT 45061 36 100.0 30 .................................... AAAAACTTTTTAGGGGGGTCGGAAAAATAC 44995 36 100.0 30 .................................... ATTTATATTATTTTTGATTTTGATTTTTTT 44929 36 100.0 30 .................................... CTGAAAGGTAAGGAACGGGCGGCTTGTGAG 44863 36 100.0 30 .................................... ACGGCTGCCGCAACGCCGCCCGAAACCATC 44797 36 100.0 30 .................................... GAGCATCTATTAGGGGTGAAGGTAGATCTT 44731 36 100.0 30 .................................... ACAAATCAATACCATGAAAACCCCATGCGT 44665 36 100.0 30 .................................... ACAAATCAATACCATGAAAACCCCATGCGT 44599 36 100.0 30 .................................... CAAAAACTTTTTAGGGGGGTCGAAAAATAC 44533 36 100.0 30 .................................... CAAAGCTATAAACACGTTTATCTGTTGTTA 44467 36 100.0 30 .................................... ATGGGGTATGCAATTACATCGCTTGGGTTT 44401 36 100.0 30 .................................... AAATTATACCAATGGCGAAAATCTCGGGCG 44335 36 100.0 30 .................................... GCTCAGTTGGAACAATGAATACATCTTGAA 44269 36 100.0 30 .................................... ATAGGTTCTATTAATACGTCTTTCGTCTTC 44203 36 100.0 30 .................................... TTTTCCAGCGCGATGAGATACCCGGCATAG 44137 36 100.0 30 .................................... CTTTTGCCGCCATCGACGCAGCCGACAGGG 44071 36 100.0 30 .................................... ACTTAATTTATTCAGTTCTTCTTTATGCCA 44005 36 100.0 30 .................................... TTCGTACCCAAAAAATCGACCGCGTAACGG 43939 36 100.0 30 .................................... ATAAATTTGTGTCTGCGTTATTCATTTTAG 43873 36 100.0 30 .................................... ATAAAAAATCGAAAAAATCAAAAATACTAG 43807 36 100.0 30 .................................... CGAAGCAGGAAGACGAAATCAAACGGCACG 43741 36 100.0 30 .................................... CGTTTAAAGACAGATAACCGGATTCGCGTT 43675 36 100.0 30 .................................... CCGCAACCGTCTGCACCGTAAATGTAATCA 43609 36 100.0 30 .................................... CATGGCGGTCGTCATATGGGGGTTCCTTCG 43543 36 100.0 30 .................................... TGGATAGGCGTTCCGCAGCATCAGCAAGCC 43477 36 100.0 30 .................................... AGCCGCCCTCGACGGCATCACGCTTGAAGG 43411 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================== ================== 33 36 99.9 30 GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT # Left flank : GGAAACGGTCGATGTGTTTGGCAATCATGGCTTGGGCGGTTTGTTGAAAGAAGGTGCTCATGAGAAATCCCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : ACCCCAACGGGAAATCCTTATTCTATAAGGATTTCCCGTTTTATTTAGTCTGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACATAGTCTATTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATGCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAACCATTTTGTCGATGGCAGCCAAGGTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //