Array 1 430388-432578 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP042556.1 Acinetobacter baumannii strain E47 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 430388 28 100.0 32 ............................ ATAGACGAAATCTGTGCCAGCATGTTCGCAGA 430448 28 100.0 32 ............................ CTTGAGGATTCAGACAGCCCTCTCGATGTCAT 430508 28 100.0 32 ............................ AGTCTATTTCGGGCGATGTTGCTTATGGTTTA 430568 28 100.0 32 ............................ AGTGAACACGACACATGATTGAAGTATGTGTT 430628 28 100.0 32 ............................ GCAACCTAGTAGCAGAAAAACACACGCAGCAG 430688 28 100.0 32 ............................ TTACTATTTTCTAGGTGGTGGTGTAGGTCAGT 430748 28 100.0 32 ............................ TTGAATACGACAAGAAAAACAATGTTTTAAGC 430808 28 100.0 32 ............................ TTCTTGGAGAAGAATGTGCAAGGTATTACTTC 430868 28 100.0 32 ............................ AGTGACATGAATTGTCCACATAAATTTCACTA 430928 28 100.0 32 ............................ AAGTTACCCGCATCAATGGCGCAATAAACTCT 430988 28 100.0 32 ............................ TGTGACAAATCTTTCTTAAATGCTTGGAAATC 431048 28 100.0 33 ............................ ATTAGTTCGAATCACAATTGCTGCTGATAACGA 431109 28 100.0 32 ............................ TAGCTCATGCTTGATACACATGCCAGCCATTA 431169 28 100.0 32 ............................ GCACCTACGGACAACAAGAAAAAGGCGCACAT 431229 28 100.0 32 ............................ GCATTCTGAGCATTCTTTATATGACCAATAAT 431289 28 100.0 32 ............................ AGACAGTGCTTCAACCGTTTTAGAATAGGTAG 431349 28 100.0 32 ............................ GCCTGATTCAAAGCCTTGCATAGAAACAGATT 431409 28 100.0 32 ............................ TAAACCTCAAAAGCAAATCGATATGGCTTTGT 431469 28 100.0 32 ............................ CTTAAAAAAGTTATATGATTCTTCACTTATAA 431529 28 100.0 32 ............................ TATGCTTGCAATGAGCTTCGGAACTGAAAACA 431589 28 100.0 32 ............................ TGTACGTGTGTATCGAATCTCACCTAAAGACT 431649 28 100.0 32 ............................ AGCTAAATCCAATATGTACCCAAACTGATCAA 431709 28 100.0 33 ............................ ATTTTGCGCCATTGCTCATAGACGTTCTTTGAT 431770 28 100.0 32 ............................ GTTTGCATACGTCAGAACTTCGGTTTCAGGTG 431830 28 100.0 32 ............................ GTAGTCCGCACCTGATTTTGTTGCATCTGCTA 431890 28 100.0 32 ............................ CCAATTCATGAGACGCATCCTGTTGTTTAAAT 431950 28 100.0 32 ............................ AAGTATTGGCTTGCAGAACTGAACTAGCTTTT 432010 28 100.0 32 ............................ CGCTAATGTGAAGATTAATGATGAGTATTATC 432070 28 100.0 32 ............................ TGTTGAATTTAATGCTCGTATGATTCGTCCTT 432130 28 100.0 33 ............................ GATGACATCACATTCATTAGGCGAAAAGAAACG 432191 28 100.0 32 ............................ AATAAGGCAAGTCCAAATTAATAGACAAACCT 432251 28 100.0 32 ............................ GAAAGTCAAAGCTGCAATGCGTAAAGCACAGT 432311 28 100.0 32 ............................ ACTGGATGGATTCGCTGCAATCAACGGTTTAA 432371 28 100.0 32 ............................ TCGTTAATCGCATCCACACCAGTACCGAAGTC 432431 28 100.0 32 ............................ GTTTACATGTGGTGCAGGAACTATTATCGGTT 432491 28 100.0 32 ............................ CCGCAATTCTGCGAGCTAAACTTCCTTTGGTA 432551 28 96.4 0 ...........................G | ========== ====== ====== ====== ============================ ================================= ================== 37 28 99.9 32 GTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : TTCACAAGTACTAGGTGATTTACTGGATCAAATTCCACTAGATGAGCGAATAGATTCTGTCTATACCGATGGCGCGTACGACACGAAGTGCTGCAGACAAGTGATTTCAGATCGTCAAGCACATGCAGTAATTCCACCCAGAAAGAATGCCAAGCCCTGGAAAGATTCTAAAATAAGTTCAATAGAACGAAATGAGTTACTTCAAACGGTTAAACATTTAGGCAGAACCCTATGGAAAAAATGGTCGGGTTATCACCGTCGTAGTTTGGTGGAAACCAAGATGCATTGCATCAAATTATTAGGTGATAGGCTGACGGCAAGACATTTTCAAAGTCAGGTCAATGAAATTCATGCGCGTGTGGCAGTTCTGAATAGATTTACGGAATTAGGTAGACCTCGCACCCAAGTTGTGTCTTAAATTTGAATGGATTGGGGAGAACTCAGCTTTTGAATGTTTATGCAACAAAGCCGATCATAACTAGAACCTGTTAAATTAATCG # Right flank : GTATTATTTTCAGTTATACTTATGCAAGCGAGATATTTTGTAAGTAATTCTTGTAATAAAAGCCAATTTTTCAGTGAGATAATTGGCTTAAGTGAGAGTTACGATTATCCGCTTATTCGTCGGTCATCCCAATAACACGGTACTACAATCAAGTGGTTCTCATGCAACCGTGACCATAATCGGACACCTAAATCCCGCTGCATATTTTGGACTGTGAAATTGGAAATCAGTAAGGTAGATTTCATATTGTCATAACGACTATATAAGACCTTATGTACCATCTCTAAGCGTTTTTCATGCCGGTCATGCAGACCATATTCATCAATCACCAATAAATCAAAACTGGAGAAATGGTCGATGACTTCTTTCTCAGAGCGTGAAGTGTCTGACCAGGTATCCATCATTTTTTGAGCAATTTCTGCACTGGTATAGTAGCGTGCAGATTTTCTACTGTTATGCAGAATGTTGCGAATAATTGATGCACTCAGATGGGTTTTACC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 2828678-2822702 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP042556.1 Acinetobacter baumannii strain E47 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 2828677 30 100.0 30 .............................. TGAGTCATCACATAAGGTTTACCCTCAAAC 2828617 30 93.3 30 ............................AC CAAAGTCGATTAAAATCTCTTTTGGTTTGT 2828557 30 93.3 30 ............................AG ATATTGCCATCCCACGAGTACATCATGAGA 2828497 30 93.3 30 ............................CC TCCTCGATCCGCAGGATTATTTACATACCC 2828437 30 96.7 30 .............................G ACTGCAGAAGAGTTAGCGGTGGGTTCTCGA 2828377 30 93.3 30 ............................AG TTACAGAGGGGATTTTCAATCCTGCCATGG 2828317 30 96.7 30 .............................A CAAACGTGCACTGAAATTCATTGTCCTCAG 2828257 30 96.7 30 ............................G. GATCAATATTCAAAAATTCAAGCTTATCAA 2828197 30 93.3 30 ............................AA CTAATCGGCAATCCTCTGTCAGCTTGATAA 2828137 30 96.7 30 .............................A AATACAATGGAACAGAGACTGTTAAGAATG 2828077 30 96.7 30 ............................A. TCATTGGTGGTGAGGATGAGGACCAATGGA 2828017 30 93.3 31 ............................CA TTTTTACGCATAACAATATTACCTTTACGCT 2827956 30 96.7 31 .............................A TTTAAACCATTGCGTTAAAAACAATTCATAT 2827895 30 96.7 30 .............................G CTGTTGTGCTTGTTGCGGTTGGGATGCTTC 2827835 30 93.3 30 ............................AC TAATTCAACAGGTACGGCATACGTTAATCC 2827775 30 96.7 30 .............................G ATGATGTTTGTTGGATTGCAACTGATGAAG 2827715 30 96.7 30 .............................A GTGAAGAAGTATCAAACATTGTTCAAGTAA 2827655 30 96.7 31 .............................G TTAGAGCCACACAGCAAGCTACGCAGAATGT 2827594 30 100.0 30 .............................. CTTCATCTTTAAATTTTCGCATTGCTGTGC 2827534 30 100.0 30 .............................. TTAGATCGTATTCGTCGTGAAAAATTACCA 2827474 30 100.0 30 .............................. TCACAAATGAAGTTCGTGCAGTTGAAGAAC 2827414 30 96.7 30 .............................C ACCTGACCACTTGGATGAATGGTGCTTTAT 2827354 30 96.7 30 .............................G ATCGGTTGCACCTGAAGGATATTTACCAAG 2827294 30 96.7 30 ............................A. CTGAAACTGAGCCTCAGTCTTAAATGGAAC 2827234 30 93.3 30 ............................CA TGAAGATTACACCCACATGATCATTCATCC 2827174 30 93.3 30 ............................CA AAAAATTAATAACTATTAACCCGCTTCCTC 2827114 30 96.7 30 .............................C GCAAAATTAGTGAGAACAAGACTGTTTATC 2827054 30 100.0 30 .............................. GGGGTGACATACCCGCTAGACCATTTTTAC 2826994 30 96.7 30 .............................A ACGTGGTCAAGCCGCCGAAGATTCCTGAGA 2826934 30 96.7 30 .............................C TTACCGTTCCATCTCTTCCAATTGAGAATA 2826874 30 93.3 30 ............................GA ATAAACATGACCAGCATCATAGCCATCAAC 2826814 30 93.3 30 ............................GG CTTTGCAAAACCTCTTTTACAACGAGCTTT 2826754 30 93.3 30 ............................CA GACATTACAGCCGCCCCAGTTGCTTCCACC 2826694 30 96.7 30 ............................A. TAAGGGGCGATGCTTTATTGATCCAGCCAC 2826634 30 93.3 30 ............................AC CGAAATGGTACCAAGTCTGAAAACCGCATA 2826574 30 93.3 30 ............................AA TGACAACTGATCCACCGTTTTGCCAAGTTT 2826514 30 96.7 30 .............................G TCCCTGCTGCAATCATTTCAAGAATCTTTT 2826454 30 96.7 30 .............................C TGAGATGTACGCTAAACAATTCACGAATGC 2826394 30 96.7 30 .............................G AATTTTACAAACTAAAGCTGGACGGAAAAT 2826334 30 96.7 30 ............................A. CGATCTTAGCACCAAAATCGTAATATGTAG 2826274 30 100.0 30 .............................. GAGCTCTCTCACAACTAAGCGAATTTAAAT 2826214 30 100.0 30 .............................. CTGGAAAGCCTATTATGGATAGGATTATCG 2826154 30 100.0 30 .............................. GAGCACGTTCACAGCTAAGCGAATTTAAAT 2826094 30 100.0 30 .............................. GTGATTGGCGCGAATCTATTAACAAAGAAC 2826034 30 96.7 30 .............................C TTGAAGTCGAGTATAGTTTTTAATCTTATG 2825974 30 93.3 30 ............................CA CCAAAATGGAGGGGAGACTACCCCCGAAAA 2825914 30 96.7 30 ............................A. AGAGTTTTCGAGAGTTCGATTAAGCACATA 2825854 30 96.7 30 ............................A. GTGAACGGCCAAGCATAATAATCAGGCCAT 2825794 30 96.7 30 .............................G TAAGTAATGGCGCACATCTTTTTTAGCTGA 2825734 30 93.3 30 ............................AA AGCCTGAATTGATTGAATCGACGATCTGAT 2825674 30 93.3 30 ............................AA CCATACCAAGCTGCAAACACAACCGCACAG 2825614 30 93.3 30 ............................AC ACCAGTTACAACGTAATTACCATCCAAGAA 2825554 30 93.3 30 ............................AC AAAAAGCTAAGTCTTTGGATGGGTGATGTT 2825494 30 93.3 30 ............................CC GAAAATTTGTACCGCCGATGTTACACCAAT 2825434 30 96.7 30 ............................A. GAAGCTAAGAAATGGGAACACCTGCAAGAT 2825374 30 93.3 30 ............................AC GTAAAAGGACTTTACGGTTTGGGTCAGCTT 2825314 30 96.7 30 .............................C TGGATGTGGCCAAAGCAATTTATCGCAAAA 2825254 30 93.3 30 ............................AA CAACACCAATACCTCTGTTAAAATTTTCTT 2825194 30 93.3 30 ............................AC CAAACTTCTGTTTTAACTCTTCGCGTTGTT 2825134 30 96.7 30 .............................C TGGATGTGGCCAAAGCAATTTATCGCAAAA 2825074 30 96.7 30 .............................G TCACAGATTCATAGTGCTTTATAGCTAAAG 2825014 30 100.0 30 .............................. AAATTGTTTTGCATGAAGGTAGCTCGCATG 2824954 30 96.7 30 ............................G. GAATATCTCCAACTGCATACAGCTTGCCTT 2824894 30 93.3 30 ............................AA AACCATCCACAGGGTAACCATTAGCAATAC 2824834 30 93.3 30 ............................CG ATATACGACAGGCTTCAAGGCGACCACTTC 2824774 30 100.0 30 .............................. CTGTTAGCTCTGCTGGATCATCAACGCCAT 2824714 30 93.3 30 ............................GA ACTGAAACAGTAACCCTCAAATGTTTAAAT 2824654 30 96.7 30 ............................A. TTTCAGCGAATGGTGTTGTAATTAGTGTTG 2824594 30 100.0 30 .............................. TTGCAATCATGATCCGGACGATAAAAAAAT 2824534 30 93.3 30 ............................GC TTAAAGTTTGGATGAAAGCGCATAAGGGCG 2824474 30 96.7 30 ............................A. GACGAACCTGTCTTACCTTCAGATCCTTCT 2824414 30 96.7 30 ............................A. ACACTCATCGCGATTCTATTAAAGTCTGTT 2824354 30 100.0 30 .............................. CTTTCCCGATGCTTCAAGTGTCTGGTGAGT 2824294 30 93.3 30 ............................AA AATGAGAAATTCATAACCATATACCCCGAG 2824234 30 96.7 30 .............................G AAGAGTTAATCAATATTATTTCTTGCTCTG 2824174 30 96.7 30 .............................A TGAGAAAGAAAAAAATTGCGACAAAGATAA 2824114 30 96.7 30 .............................A CTTGGGAAGAGCGTTGCGGGGCTATTTCTT 2824054 30 93.3 30 ............................AG CTAACTTACCACCGTTTGCAAATGTTTATA 2823994 30 96.7 30 .............................A AAGATACGTTTTTAGCTTTTAATGTGATTT 2823934 30 93.3 30 ............................GC AAAACTTAAAAAAGCAATCCAGACGCATGC 2823874 30 96.7 30 ............................A. TAGCTAAACCTTCAATCTCGCCTTCAGCTA 2823814 30 93.3 31 ............................CC CTGAAGACACTTCTTTGAAACGCAACGTCAC 2823753 30 96.7 30 ............................A. GTCCATTTTGCGGATACGCAGATGGGTTAG 2823693 30 100.0 30 .............................. CCCCCTTGAGCGCTTCAACCATCGCCTTAA 2823633 30 93.3 31 ............................AA ACTTAGATGACAAAGTATTAAAGCTCTGTGA 2823572 30 93.3 30 ............................GG GTATAAGTGAAGTAAGTATCTTGAGGAATA 2823512 30 93.3 30 ............................AA TGGATGGATATGGCATAGGCAAAGACGGCA 2823452 30 96.7 30 ............................A. AGAGAATCGGTACTGGATAACCTTGAGCGG 2823392 30 96.7 30 ............................A. CCTGAGCGTCGTTGGAAGGCGGACTTCCGG 2823332 30 93.3 30 ............................AA ACTCTTGCAAGCTAGCAAGATAAGCAGGAT 2823272 30 100.0 30 .............................. GAGAATTATGAAAAAGCAGGCTTCTATGAA 2823212 30 93.3 30 ............................AA CAGACATACTTCTTTCATTTGCATCGCCAG 2823152 30 93.3 30 ............................GA GGCGTAAAGATGCGGTGTTGATCTTGCACG 2823092 30 96.7 30 .............................A CGTAATAAGTACACGGTGCAATCGGTGCGT 2823032 30 90.0 30 ........................A...AG AGTTTTAAACCCGCGCTACACCTTTCTAAA 2822972 30 93.3 31 ............................CC AAAAAAAATAGCCCTACGTTTAAGCATCGAC 2822911 30 93.3 30 ............................AA CGTGAACAATTGTTTTAGCTTTGAACATTA 2822851 30 90.0 30 .............C...T..........G. TACTGGGTTGCGGAATATATTCGCAATTAT 2822791 30 83.3 30 A.....AA.........T..........A. TTTGATCTTTACTTATTCTCGCTTCAAACA 2822731 30 73.3 0 .......A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 100 30 95.4 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAACAATAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTAAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGTAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAGCCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAACC # Questionable array : NO Score: 5.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.17, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //