Array 1 1561604-1563224 **** Predicted by CRISPRDetect 2.4 *** >NZ_CBZU010000001.1 Lacticaseibacillus rhamnosus strain BPL15, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1561604 36 100.0 30 .................................... TTTCAGGTATCGTAAGCGAACGTCTAGGCA 1561670 36 100.0 30 .................................... TCAAAAATCGGGTTCTCTCTCAGACCCTTG 1561736 36 100.0 30 .................................... AACAGTGACTTGGCTAACAACTTGCAGCAG 1561802 36 100.0 30 .................................... ACATATTTTCGTGGCCACGGTTTACCATGA 1561868 36 100.0 30 .................................... TTTTCATATTATCAATGACAGCATACGAAT 1561934 36 100.0 30 .................................... GACATATTCGCGGCAAGTGCTTCCGAATCC 1562000 36 100.0 30 .................................... CGCCAAACGCTGAAACAGGTGATGACAATG 1562066 36 100.0 30 .................................... GAGCAAAACATTAAAAACATGCAAGGCGAT 1562132 36 100.0 31 .................................... AGTGTTTGCTGATTACTTGGATACCCTCGCC 1562199 36 100.0 30 .................................... CATTTTGGCTATTTTGAAGATGGCACCACG 1562265 36 100.0 30 .................................... TCAAAAGAGGAAGTGAAGCAGCGCTATCTC 1562331 36 100.0 30 .................................... GATCACCATTTGGCTTGCGAACAACCTTAT 1562397 36 97.2 30 .......T............................ GCTCATGCGCTCCAGAAAAGGTCTTATTGA 1562463 36 100.0 30 .................................... GTGACGTTTATTCTAGGGGCGCGCGGTGTG 1562529 36 100.0 30 .................................... TCTTGCAACTTGACAAACAACTCTACCAGG 1562595 36 100.0 30 .................................... TATTGACGTTGAGCCTAACCTTGTCAGACA 1562661 36 100.0 30 .................................... AAGTCATCAGTGTTTGGACTGTTCCTTACA 1562727 36 100.0 30 .................................... TTTGACCCTGCGTCCCGTGTATTTTGTTCC 1562793 36 100.0 30 .................................... AAAGTTGGCGGCATACGTTCAAGCAACAAG 1562859 36 100.0 30 .................................... AAATTGCCCGACTTGCTGCGCCGTCTAACT 1562925 36 100.0 30 .................................... TTGATCGGTTGCCACTGTGCGGGGTCATTG 1562991 36 100.0 30 .................................... AATTGCAGTGACAATGATCGTTGCATTGCT 1563057 36 100.0 30 .................................... GCAACTTGTGACCAGCCCCATCTGCTTGCG 1563123 36 100.0 30 .................................... GAAAAATGGCGCAAGATTGTCGATCAAGAG 1563189 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 25 36 99.9 30 GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Left flank : GAGCTGGATTTGGACAAGTTATTTCAACGCTTGATCATCAAGAAGGTAAGCCAATTGATAGAGGATCAGCGGCTGATTGAGTTGATTGAGCAGTCACAACGAATGGCAATGAGCTTATTGAGAGAGCCGTTGTTAAGTGAACTTCCAGTCACAGTCGAACCTGGTGGAAAACTTGAACAAATCATGAAATACTGTAATGTTCATTTTGATGAGGAAGTACTCACGGAGCCTTTCTCGAAAGTTGAAGCGGCAATTCAGACTTTGGCGAAACTTGAGGAGAAACGTCTTGTCATTTTTGCCAACATCAGTCATTATTTAGATGTTGAAAGTCTGAGCAAGCTGTTAGATCAGGTTAAGAACACATCGTTGGAATTACTTCTCATTGAATTTTCAGATGTCGAACGCAGAAAGTTTTTTGAGAAGTGCCAGTATATCTATATTGACAGAGATTTTATGGATAGCCGAGAACTGATTGATTAAGAGCCTGTGTGAAAACACCG # Right flank : CTTCACTCTCTTCCATGTTCTAAAGTGTAGAGTCTCAGGCAAATATCAGATCAAAAAACACCTTCAGTGAAGACGCTCCTCATAAATGCTATGCAAATCCCAAAAGAAGGCAGCAGCAATGTCAAAAGCGAAACTAATCCTTTCCCCAGCCTTTTACACTGATCTCAAAGAAATCCGTCACATGTACCAACAGGCGTTCAAATCACTTTACGGCAAATATCAAGATCGGGAAACGAATCCCTACTGTGAATCGTTGGAAAGCTTACAGAAAAAGTTCAAACGGCCTAACAATGCCTTCTTCTTTATAATCGTTGAAGATAAACGCATAGGCCTGATTCGCGTTGTAATAGATCGCAAAAATTCGGCAGCCCGTATCTCACCATTTTTAATCTTGCCGTCTTATCAAGGAAAGGGATACGCTCAGCTCGGCCTACAGTTGATTGAAGAACAATTTCCGCTCATTCAAACATGGTATGTAGACACGATTGCGGAAGAACCCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //