Array 1 3498493-3488040 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP035493.1 Xylanimicrobium sp. FW10M-9 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================================================== ================== 3498492 29 69.0 82 .G....G.AA..C.....C....CC...G TCGAGCAGCGACGCCGGCGGCAGAGCGGCCAGGACTGAAGGCGCAAGCGGGGGTTGGCGGGTATCTTTGCTGGTCAGGAAGT C [3498489] 3498380 29 100.0 32 ............................. GCCGGCGTGCACACCGTGGCCCGCTACCTGAC 3498319 29 100.0 32 ............................. TACGCCCACGGGCAGACGCAGGCGCAGGTCGA 3498258 29 96.6 32 ............................G TTCGCCGCCCTGCTCTCCGGGGCCCGGTCCGC 3498197 29 100.0 32 ............................. GGTGGCATGGGTGGGGCCCGGCACCGCTCGTC 3498136 29 100.0 32 ............................. TTGCCGGGCCCGACGCGCACGGACGTCGAGAT 3498075 29 100.0 32 ............................. CGCACCGCGGCCGCGGCCGCCGCCGAGCACCA 3498014 29 96.6 32 ............................G GCGATCGGCAACCCGCTGGGCAAGATCGTGCA 3497953 29 100.0 32 ............................. GCCCCGCGAGCAAGTTCGCCGCGCACCCACGC 3497892 29 96.6 32 ............................G AGGGGCACGTCAGACCACGCCCGCGCCTCGAG 3497831 29 96.6 32 ............................G GATGCGTTCTACCGCGTCGAGTCGGACGGGTC 3497770 29 96.6 32 ............................G TACTGGACACAGCAGGTCAACGATGCCGGGTA 3497709 29 96.6 32 ............................G CCGGCCGGGGCGAGCGCGCGCAGGGCCAGGTG 3497648 29 96.6 32 ............................G TACGCCAGCGCGGCCCCGTCCTCCGTCTCGCC 3497587 29 96.6 32 ............................G CCGCCGCTCGTCAGGTAGCAGGAGATCTCCTT 3497526 29 100.0 32 ............................. CCGGCGTCGCCTGCCCCCGGTTCACCGTGAGC 3497465 29 96.6 32 ............................G AGCGCGAGCGTGCCCGCAGTCTCGTCGAGCCC 3497404 29 100.0 31 ............................. CCGCGCATGGAGGCACCGGCCGCGAGCAGGC 3497344 29 96.6 32 ............................G CAGGTCTCCGTGCCCAAGCTGTCCGACGCCGA 3497283 29 96.6 32 ............................G GCGCTCGTGCAGGCCGCGCTCGGTGGCGGTGC 3497222 29 100.0 32 ............................. AGGTCGCTCGGCGCAGCGAAGTCGATGTTGAG 3497161 29 96.6 32 ............................G GCGCCCTGCCCGTCGACCCACAAGCCGGACCA 3497100 29 100.0 32 ............................. GGCCAGCCCATCGACCTCGCGCTCTGGGGAAC 3497039 29 96.6 32 ............................G CGGTCGACGAAGACGTACCAGCCGTAGACGAT 3496978 29 100.0 32 ............................. TCGGCCGCAGCAGTCGCTCGGGTCCAGGACAT 3496917 29 100.0 32 ............................. CGGTCCACGTGCCGGCGCTGCCTGGCGCCGAT 3496856 29 96.6 32 ............................G GCGGGGCGCCCATGTAGGTCTGCGATCCCGGG 3496795 29 100.0 32 ............................. GGGTCCGGCCTGCGGGTCACGGCGCCGGGTCG 3496734 29 100.0 32 ............................. CCATCGACGCCCCGCAGGAGCAGAAGTGAGCA 3496673 29 96.6 32 ............................G TCCGCGACGACCTGGTAGCGGGCCTGCCCGGA 3496612 29 100.0 32 ............................. CAGTTGGGTGGGTTCGGGGACGCGAACGGGAC 3496551 29 100.0 32 ............................. TCCGAGAACGCCAACCTCCGCGCCGCCAAGAA 3496490 29 96.6 32 ............................G TCGACCAGGGACAGGTCGGCGTAGTTCTCGCG 3496429 29 96.6 32 ............................T CGCTCGCGCATCCCGTCGCGCAGGTTCAGCGC 3496368 29 100.0 32 ............................. CTGCGCATCCGCATCGGTGCCCGCCACGGCTT 3496307 29 100.0 32 ............................. GCGCACGGGTTGCCGTCCGACACCCGCCTCCA 3496246 29 96.6 32 ............................G CACCACCTGAACCTCGCCGCCCTCGTGCGGCA 3496185 29 100.0 32 ............................. TCCTCGGCGTCGGTCAGGACGAAGCCGTACTC 3496124 29 96.6 32 ............................G TAGACCGGGGCGCCGAGCGGGATGCCGGCGGT 3496063 29 100.0 32 ............................. CAGACCTCCGCGTCAGGGGTGGGCAGCAGGTT 3496002 29 100.0 32 ............................. CCGGACCCGTCCGCCCTGGTGATCGCGTTCAC 3495941 29 96.6 32 ............................G GGGATGCGGACCACGAGCCGGGAGACGACGAG 3495880 29 96.6 32 ............................G GTGGCGAGGTAGGTCTCCTCGGCCTTGCGGGC 3495819 29 96.6 32 ............................G CCGGAGACGACGATGCGCTACTGCAAGCTGCC 3495758 29 100.0 32 ............................. GACGAGGGCCTGCCCCTCGAGCTCGGCGGCGC 3495697 29 100.0 32 ............................. GGCCGGTCCGAGCGCGTGCGTCACGTTCGCGA 3495636 29 96.6 32 ............................A CGCCCCCCGCCACCGCTTGAGGCGGCGACGGG 3495575 29 100.0 32 ............................. CGGATGTCCAAGCTCGCGAGGATGTTGGCCTT 3495514 29 100.0 32 ............................. CGGGCGCGTGGGCGCCCCAGGACGGGATCAGT 3495453 29 96.6 32 ............................G ACGCTGGTCAAGGACGGCGGGCTGGAGCACGA 3495392 29 100.0 32 ............................. TAGGTCTCTCCGTGCGATCGGAGGGACCTAGC 3495331 29 96.6 32 ............................G GCCGCCGACGGCACGCAGGTGTGGCCGCCCGC 3495270 29 100.0 32 ............................. GATGCGGCGGCTTCGCGGGCAGTACCGGCGGC 3495209 29 96.6 32 .....G....................... AACCACGTGTGCGTTGCATTGATGGTGCTGGA 3495148 29 100.0 32 ............................. GAGGTCTGGCGGCAGGTCGACGCGCAGCCCGC 3495087 29 100.0 32 ............................. TCGTGCGACGTCGAGCCGGCGGGGGAGAGGTA 3495026 29 96.6 32 ............................G GACGCGATCCAGTACGCGGCCGCGATGATCGC 3494965 29 96.6 32 ............................G TCGCGGCCCGCGCGCACCCCTGCGCGGGCTGC 3494904 29 96.6 32 ............................T CTCATCGTTCTTCTCGATCTCAACCTCAAGCT 3494843 29 96.6 32 ............................G ACGCCACCCTCAAGCTCGGCACCGACAACTTC 3494782 29 100.0 32 ............................. CCGTGGCGCTCGGCCCACGCGCGACCGTCAGC 3494721 29 96.6 32 ............................G TCGTCGACGTCGACGTCGGCCGGAGCGGGCGA 3494660 29 96.6 32 ............................G GCGTTGCCGAGCGTGGACACCACGGTGAACAG G [3494638] 3494598 29 100.0 32 ............................. CCGGACGGGTGTACCCGCACCGACAACGAGCA 3494537 29 100.0 32 ............................. CCGCTGACCTGGTTCGGTGTGCTCGCCGCGGT 3494476 29 100.0 32 ............................. TGGGCCGCCCACGCGTGGTGGTAGGTGACATC 3494415 29 100.0 31 ............................. CCCACCCAGCTCCGGAGGTGCGCCCGTGACC 3494355 29 100.0 32 ............................. GCCTCCCGGCTGGCCGGTCGCGGCGGCGCCGG 3494294 29 96.6 32 ............................G CCGCCACCTGGGCACGCGCCCCGGCTGCGTCC 3494233 29 100.0 32 ............................. GTGTCCCCGGTCTGGTCGATGGCCTCCTTGAT 3494172 29 96.6 32 ............................G TTGACGTCCTCGACCTTCGCGCCGGCAGCCTC 3494111 29 96.6 32 ............................G AGGCGAGGTTTCCATTTCTATGGACGGAAGAA 3494050 29 96.6 35 ............................G GTTGGCCCGGACACGATCTCGGCGCTCCAGCGGGC 3493986 29 100.0 33 ............................. AAGGTCTATGGCCACACCATCGTGACCCGCCAC 3493924 29 100.0 32 ............................. TCCCCGCTGAACGGTCGCACCCAGTGGATTAG 3493863 29 96.6 32 ............................G CGGGCTTAGCCCTTAGCGTCAAGAGACACAAG 3493802 29 100.0 32 ............................. AACGCCGTCTACCGCACCGGCCAGTTCTGCGC 3493741 29 96.6 32 ............................G GCCCGGCCACTGGTGTGGTCCGGGCCTTGCGT 3493680 29 96.6 32 ............................G GCGCCCGCGGCGCCGGACGTCACGAACCCGTA 3493619 29 100.0 32 ............................. CGCACGCGACGGTGACGACGCCTACCTGCCAG 3493558 29 96.6 32 ............................G ATCCGCGACCTGCGCAAGGTCCTGACGAAGTC 3493497 29 96.6 32 ............................G CACCAGCCGTTGCTGGTCGGCCGCGAGTACCG 3493436 29 96.6 32 ............................G CGCTCGACGATGGCGGCGTCATCGACGTCGCC 3493375 29 100.0 32 ............................. AGCCAGCCACCGGCCGCCGCGTCGATCACGGC 3493314 29 96.6 32 ............................G CATGGAAGTGAGGTGCTGGAGCTGCTGCCACG 3493253 29 96.6 32 ............................G TACCTCGAGTCCGCCGCGCTGGACTCGCGCGC 3493192 29 96.6 32 ............................G CCGCCTGCGTGATCCTCGCCATCCCCACCTAC 3493131 29 100.0 32 ............................. ACCCTCGCCGCGACGATCAGCCAGACGGCGCC 3493070 29 96.6 32 .........................A... TTCGCGTGCAGCCAGGACGTGACGCCGGGCCA 3493009 29 100.0 32 ............................. ACCGTCTGCCCCGTCGCGGTCGTGTGCAGCAC 3492948 29 96.6 32 ....C........................ TGCCGCTCGTGCCAGACGTACTTCGGGTCGGT 3492887 29 100.0 33 ............................. TCGACGACTACCTAGCGGAGTTGCTAGAGGACA 3492825 29 100.0 32 ............................. TCGGGCACGTTCTCGACGACGATCGCCGGGTA 3492764 29 96.6 32 ............................G CTGAAGCTGATGCAGGCCGCCACCACCGCGGT 3492703 29 96.6 32 ............................G GCGTCGCGCTTGCCCTCGGTGCGCAGCTGTAC 3492642 29 96.6 32 ............................G TCGCCCGCGCCCACGGAGCTCAACGCCATGGC 3492581 29 96.6 32 ............................T CTTGCGCTGTGTTCACTTCCGTGAACGCCGGG 3492520 29 100.0 32 ............................. AGGCTGAGGTCCGGGACGACGATCTGGCCGTC 3492459 29 100.0 32 ............................. GCCTCGTCCGACGCGGCCGAGATCGTCACCAC 3492398 29 100.0 32 ............................. ATCGCACCCCGCACGACGCCCCCGACGTCGTG 3492337 29 100.0 32 ............................. GCGGGCGCCGGCGCAGGAGCGGGCGGGGCCGG 3492276 29 96.6 32 ............................G TCGTGTGGCTCCGGCGTCGGGGTCGGTCGAGA 3492215 29 100.0 32 ............................. GCGTTCAACCGCTCCAAGTCGGCGGTCAAGGC 3492154 29 100.0 32 ............................. TACTGGGGCGAACCCGACCTGCAGGGCACGGG 3492093 29 100.0 32 ............................. CCGGTGGACGGGTCCGCGCAGACCGCACGGCA 3492032 29 100.0 32 ............................. ACCTTCCGCGACGTCGTCGACATGGGCACCGT 3491971 29 100.0 32 ............................. ATGCAAGGGACGCGGCCGTGGCGCCGGATGGA 3491910 29 100.0 32 ............................. GAGCAGTTCGACGAGATCACCGCAGGCATCGA 3491849 29 100.0 32 ............................. GCAGACCCAGGCGATCGCCCGCGCCGGCGGCG 3491788 28 96.6 33 .................-........... GAGCTCTCGATGTCGATTCCGAGCATCGTCTCC 3491727 29 100.0 32 ............................. CCGTCGGGCTCGCCTTGGCGGGCGCGGCCGCC 3491666 29 100.0 32 ............................. AGGTTGGCGTCGTAGGCGTGGACGTCCTCGAG 3491605 29 100.0 32 ............................. AGGTTCAGGGTGAACCCGGTCATCGACACGTC 3491544 29 100.0 32 ............................. GTCATGAACCGGTCACCGGAGAACGAGACCGC 3491483 29 100.0 32 ............................. TTCTCGAAGGTCGACAACGACGGACGCCCGGT 3491422 29 96.6 32 ............................G TCGACGCGGTGGCCGGGGGTCGTGACGTCGTC 3491361 29 96.6 33 ............................G GCGGCGAGCGCCGACAGGGCGGCCCTCACCGGC 3491299 29 96.6 32 ............................G AAGATCGCCGCGCAGAAGGTCCTTGCGACCGA 3491238 29 96.6 32 ............................T CACGGACCAGGGGGCACCGATCACGTTGCGGC 3491177 29 96.6 32 ............................G CCCTCGTCCGCCAGGTCTTCGTCCCCCGCCTG 3491116 29 100.0 32 ............................. GAGGATCCCGCCTCCCCGCACAGCTACCAGGC 3491055 29 100.0 32 ............................. CGAACCACCTCAGCGACGACGACGGCCAGGCG 3490994 29 100.0 32 ............................. ATCCCGGACAGGTCGTCCGGGATCGTGACCGA 3490933 29 100.0 32 ............................. TCGGGTCTGCGGCGCGCAGAGGTCGCCCAGGT 3490872 29 100.0 32 ............................. GACGGGCACGAGTGGTCGCGCGAGGACATCGC 3490811 29 96.6 32 ............................G TCCACGGCGAGGAACGTCGCCGTGCAGGAACA 3490750 29 100.0 32 ............................. CTTCCCAACCGGATCCGCAGCTACCAGGCGTG 3490689 29 96.6 32 ............................G GCGACCGGTTCGCCGAGGCGAAGGTCAAGCTC 3490628 29 100.0 32 ............................. AGTACGGCGGCGAACGCGGCGACCGCGCACAA 3490567 29 100.0 32 ............................. GCCGGCCAGACGACGACGTAGGTCATCGACCT 3490506 28 96.6 32 .................-........... GGGGGCGCCTGGTCGAAGCCGGACGGACCTGA 3490446 29 96.6 32 ............................G CCTTCGGCCACGAGGGGCACCCGAGTCCCGGA 3490385 29 100.0 32 ............................. GGGCGCGAGCGTCGCTTCGACGCGCAGCTCGT 3490324 29 100.0 32 ............................. GATGTCCTCGCACATGGTCGGCTCACCGACGA 3490263 29 100.0 32 ............................. CTCGTCCCAGAGCACTGACTTGGCCGCGGTGA 3490202 29 96.6 32 ............................G GACACCGAGACCGGGCACGAGTTCGACGTGCC 3490141 29 100.0 32 ............................. GAGGTGTCCGAGTTGCGAGTCAGCGCCGCAGC 3490080 29 100.0 32 ............................. GCCCAGGTGACCAAGCGGGCCGGGCGCGCGGT 3490019 29 100.0 32 ............................. CCGCTGTCGAGCAGGTAGGCGACGCCGCGGTG 3489958 29 96.6 32 ............................G GTGGCGTGGCGGTGCTCGCCCGCGACGTGGTC 3489897 29 100.0 32 ............................. GCTCTTAGCCGAGCCCGAGCTCCCGCGCGTGG 3489836 29 96.6 32 ............................G TGGTGGACCGCCGGAGCTCCTCTGCGCGGGCA 3489775 29 100.0 32 ............................. GTCGGGGTCAGCCGCAGCCGTATTTCACCGCC 3489714 29 100.0 32 ............................. GCGACGAACGCGTTCGGCCAGAGCACCGTCCA 3489653 29 100.0 32 ............................. GTGACGCCGCCAGCCCTTTCCTCGGCGTGGGC G [3489636] 3489591 29 100.0 32 ............................. AACAACGTGGTGACCTGGGTCGACGCCTCCGC 3489530 29 100.0 32 ............................. AACAACGTGGTGACCTGGGTCGACGCCTCCGC 3489469 29 100.0 32 ............................. TCGGCCACCAGGTGATGCATGAAACCCCCTCT 3489408 29 100.0 32 ............................. GCGATCATCGTCGCGGGCCGCGGCCTCGGCGG 3489347 26 89.7 32 .................---......... TCCTTGCCGTGGGAATGGTCGTAGTACCACAG 3489289 29 96.6 32 .............C............... GTCTACGCCCACACGGCCGGGCCCTGGCTCGG 3489228 29 96.6 32 ............................A CGTTCTCGACCGGAGACGACGCATGAGCGCCC 3489167 29 96.6 32 ............................G ACTCCGGCGCAGCCCGTGCCGGCCACCCGAGA 3489106 29 100.0 32 ............................. GTGTAGTGCGGCGCCGCCGCGGTGGGCACGGC 3489045 29 96.6 32 ............................G CCGTCCAAGATGGTCGCCGCCCTCCAGCAGCG 3488984 29 100.0 27 ............................. CATGCCAGTGGTCTCGATGTGGTGCCC 3488928 29 100.0 32 ............................. CGCGCCGACCTCGACAACGACACCAACCCGTC 3488867 29 100.0 32 ............................. CGCGCCGACCTCGACAACGACACCAACCCGTC 3488806 29 96.6 36 ............................G ACGTACTGACTGACGCACGGGCAGCTCGAGGTTGTT 3488741 29 100.0 32 ............................. GCCCCGCGGGCCGTGCATCCCCCGGGGCGTTC 3488680 29 100.0 32 ............................. CAGGGCGCGAGGACCTTCGCGTCAGCGACGGT 3488619 29 100.0 32 ............................. TGCGCCACGGCGGCAACCCGGTCATGCGCTGG 3488558 29 89.7 32 ....................C.C.....G GACCCCGAGGCGCGAGCCAGCAGGAGCCGCCA 3488497 29 96.6 32 ............................G CCGTTGATGTGGCGGCGGATCATGGTGCCGGC 3488436 29 100.0 32 ............................. TTCGCCGCGCTCGGCCTGACCGGTGAGCAGGC G [3488419] 3488374 29 100.0 32 ............................. ACCGATGGGAGCTCCCCGTGAGCATCAAGAGC 3488313 29 96.6 31 ............................G CCGACATGTGGCCGGTGCACCGCATCGACGG T [3488287] 3488252 29 96.6 32 ...............A............. GTCGGCGCGGTCGCGACCGGCTGCGCCCACGG 3488191 29 96.6 32 ............................G TCGTCGTACGTCTGCGCGGACTGCGTGACGGG 3488130 29 96.6 32 ........T.................... TTGATGGTGTCCAGTTCCATCTGCGCGAACGA 3488069 29 93.1 0 ......................G.....G | G [3488045] ========== ====== ====== ====== ============================= ================================================================================== ================== 171 29 98.2 32 GTGGTCCCCGCGTAGGCGGGGGTGAGCCC # Left flank : GCGAGCTCGCCGACGTCGTCATGCTCTGGGACGGGGCGCGGGGTGCTGTCGCCGGCGGCACCGCCTACGGCGAGTACGACGGGGACCCGGGCTGGTGATCGTCGTCGTCCTCTCCGTGACCCCGGAGAAGCTGCGCGGCGAGCTGACCCGATGGCTGCTCGAGATCAGCGCCAGCGTCTATGTCGGGCACGCGTCGACACGCGTGCGCGAACGACTCTGGCTGCGCATCGTCGAGGACGTCGGCAGCGGGCGGGCGCTCATGGTGTGGTCGGCACGGAACGAGCAACGGCTCGCGTTCCGCGTGCACAACCATGCCTGGGAGCCCGTCGACGTGGACGGCGTCACGCTGATGCGGCGACGGACGGCGGAGTCGGACCGGATCCGCCAGGCGAAGGAGCGTAGAGCCGCGGCGGGACCCAGGAGTCCCGATGGAGGCGTCGTGGAGCTGGAAGAGGAGCGAGCAGGAGACGCGTCGTCACCACGGCGGGCCGGTTGGAGCC # Right flank : ACCGTCGACCGGTTGACCCTCGGCACCACAAGCCAGTCATCTATCCGTGCAGCAGTCGCGATCGTTGGCTTCCTGGTCCCAGCAGACACAGGCCGCGCCCCTCCCGCCGCCCGCGGGCACACCGCCCTACACGCCACCCGCCGTCGCGCGCCCCGAGAACTCCGGCCTGCGCTTCGCCTGGAACGCCGCGAAGCCCTCGCGGTAGTCGTCGGTCCCCGAGAGGACGGCCTGTGCGCGGTTCTCGGCGTCCATCGACTCCCACAGCCCGAGCCGCTGGTCGCGCAGCGACGCCACGAGGCGCTTGCTCGCGACGAAGGCCTGCGTGGGCCCCGACGCCGCCGCTCGTGCGGCGGCGCGCGCCTCGTCCAGCACGGTGCCGGCGGGCAGCACCCGCGAGAACAGGCCGGCCGCGACGGCCTCGGCACCGGTCATCAAGCGCCCGGAGTAGATGAGGTCGAGCGTGCGGTGGGCGCCGAGCCGCTCGTAGAACAGGGCGTGCC # Questionable array : NO Score: 5.93 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:-0.01, 8:1, 9:0.78, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGTAGGCGGGGGTGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCAGGCGGGGGTGTTCCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.90,-13.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [30-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-28.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //