Array 1 128527-128078 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACEPN010000014.1 Pseudomonas aeruginosa strain PAL1.40 NODE_14_length_158690_cov_16.9487, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 128526 28 100.0 32 ............................ TGCTTATCGAGGCCGCGATTACGGGCAACCGC 128466 28 100.0 32 ............................ CAGGCCACTTCGTCCTCGCGCAGCGCTTCCCA 128406 28 100.0 32 ............................ TCCGGCCCCACTCGGTCCGGACTGTGCAGCGC 128346 28 100.0 32 ............................ TCTGGCGAACTGCGCGGCCTGCACCTGCTCGA 128286 28 100.0 32 ............................ GTTGATCGCAGGTGGCAGGTTCTGGCGGGCTG 128226 28 100.0 32 ............................ ATCCGGCCCGCTCACCGACGGCGGCGCGTCCT 128166 28 96.4 32 ............G............... ACGGTCCCTTGCTCGCGCCGACCAAGCGCCCC 128106 28 82.1 0 ......................G.CTTC | C [128081] ========== ====== ====== ====== ============================ ================================ ================== 8 28 97.3 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : CCAACCGCTTCCCGCACAACGCCACGCTGTACCTCGACAGGCGCCGCCCGGCCAGTTGTTCGAAAGCGCGAAAACACGCCTGAAGTCGGCGATCAACGTCCTCGCCATGACCTGTCTGCTCGACGAGAACGAAGAACCCGGCGAAACCCTCGCCTATATCAACGGCGCCTTGCTGAAGCTGGTCAGCGACGCCCTCTCCGAGATCGAAGCGGCCCACCCACGCCAGTAGCGCACATCCCAGGCGCGACGCCCCCGGCCTGGCCAGGGGCTTTGAGACGCGATCCCTTCAAGGCCCATTCGCGCGCGAACGGTGAGGCTCACCGCCCGTCCCGCTCATCACGAAATAGCCTCCAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGGTTTCTTACGCCCTTGAAAATCAAAGACTTACAAAGCCTCGTAAAAAGAGGGTTTCAAACTGGGAAAACCCTGTATTTCTTTTTCCTTCAAATGGTTATAGGTTTTCGCGGCTA # Right flank : CACTCGGACTCGCAAATGGACGCTGGAAGGCAAGAGACGATCACCGTGGAACGACTGGAAGACAATGCCGTTCACACCCGGCTTTCCCCTGACGAAACGAATAGCCTGTCCGTCTCCGTAACGCCCCTGTCAACTTGCCCCGGTAAACCGGACCTTCGTGAAGCCTGCGGAGAACTCCGGTATGAGTGGGATGGACCTCAAGCGCCGCCGCGTCGTGCAAGGCCTGGGCGCTGGACTGCTGTTGCCGGCGCTGGGCGCGCCGGCGCTGATCGCCTCGCCCAGGGCGCGGCCGAAGCTGACCGATGGCGTGCAATCCGGCGACGTGCAGGGCGACCGCGCGCTGGTCTGGAGCCGCACCGACCGCCCGGCGCGGATGATCGTCGAATGGGACACCCGTAGCGTCTTCAGCGAGCCGCGCCGACTGGTCTCGCCGGTCACCGACGAGCGCCTCGACTACACCGCGCGCATCGACCTGCGTGGCTTGCCTGCCGACCAGTCGA # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //