Array 1 17839-19907 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOJV01000038.1 Vibrio cholerae strain 195V0316 NODE_38, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 17839 28 100.0 32 ............................ TGTCATCGGCAGGAACTGGAGCGTTTGAAGAT 17899 28 100.0 32 ............................ AGCAATGCCCGCACCGCTCACAGTGTCCGTCA 17959 28 100.0 32 ............................ CGGCTCTACACCTTTACCCAAGCCCGGCACTA 18019 28 100.0 32 ............................ ACAGACGGCCGGAACGGAAACATCGCCTGTGA 18079 28 100.0 32 ............................ AAGCCAAGTCGATTTTGGACTTCTGGCATCAC 18139 28 100.0 32 ............................ TATATCCGCTTGCTAGGTAAAATGGGATGGGA 18199 28 100.0 32 ............................ AACAGGTGGCAAAGGATTAGTAGGGTCATTAG 18259 28 100.0 32 ............................ ATCACCAGAAGCGTTGACGGCTGCAACTAATC 18319 28 100.0 32 ............................ CAACAGGTGACAGGGTGGCGCCGCAGCAACTA 18379 28 100.0 32 ............................ TAACCCTGCGTTCACCTTTGCGGATTATGATA 18439 28 100.0 32 ............................ CACATCAATAGCAGCGTGAGACGCAGAAGCAA 18499 28 100.0 32 ............................ ATGATGAATTTCCTTATTTAGTGTCTAAAACC 18559 28 100.0 32 ............................ GCTTAAGATAAGAATTGTAACCTCACCACCAT 18619 28 100.0 32 ............................ CAGTACTGTTGGCGGGTGAAGACGTGCCGGTG 18679 28 100.0 32 ............................ TCTTCCCATTGTTTTTTGGCGATGTAGCAAAC 18739 28 100.0 32 ............................ AAGCTTATGAAGCGCGTTCATAACGATGACCG 18799 28 100.0 32 ............................ TGCAAATGGAGTGCCGCACGGTTCATATGTGG 18859 28 100.0 32 ............................ TGACTCTCCGGCTTATAATTATTATCAAGCTT 18919 28 100.0 32 ............................ AAGAATACATACAGCCAGTTGGCGAAGTCGTG 18979 28 100.0 32 ............................ TTATCACGGGCGGGGCGATAGTCGGCCAAGAA 19039 28 100.0 32 ............................ ACCAAGAAAAGCCAGCGTGATAAGCCATAGCA 19099 28 100.0 32 ............................ ATACCGGATAAGCCGCGCAGCTCCACAATTAC 19159 28 100.0 32 ............................ TTAAATTCAAATCCTGCGCTTCGCCACGGCGT 19219 28 100.0 32 ............................ TGATTCACAAAGTAGCGCATCATCTCCTCAAC 19279 28 100.0 32 ............................ GCCGAAATAATGTTTATTGTTGATATATTGGT 19339 28 100.0 32 ............................ TTATGGGTATTTAGTGGGAATAGCCCTTTCAA 19399 28 100.0 32 ............................ ATCTATCACAAACGGAACCATAAATGACAACC 19459 28 100.0 33 ............................ AGAAGAGTGCCCGCGTATGGCCTGACGTCCTCT 19520 28 100.0 32 ............................ TCACGGCTCACTCTGCCCCACATCTTGAGATC 19580 28 100.0 32 ............................ TGCTCGCCCTTCATATAAGGCACTATGGTGTC 19640 28 100.0 32 ............................ TTTAGCCCACCTTGAACAAGTGAGATTGCGCT 19700 28 100.0 32 ............................ GTTACGCTGCTGATGTTTGCCCCTGACTTTGT 19760 28 100.0 32 ............................ CAAGAATCGTAGCGCATGAACTAACACGCCTT 19820 28 100.0 32 ............................ TGACTCTCCGGCTTATAATTATTATCAAGCTT 19880 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 35 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GATGTAACTTATGTAAGCTTTGTACGCAAGCAGGTGAAATCGCCCGAACGAATAGAGCGGGATATGCAGCAAAAAGCCGAACTATGGGCAGCAAAATCTGGTAAACCGCTGGTGGAATGTTTAGTGGATTTACAACAAAGCAAGCCGACAGCGTTGTGCTCCTTGCCCTTTATTTACTTGCATAGCCAGCAAACCAAGCAACGTTCACCAGAAAAAAACAGCAAGTTCCCGCTGTTTATTGAGATGCAGCAGCAAAGCACATCTCAAGATGGGGGCTTCGATTGCTATGGTTTGAGTAGCAAAGCGAATGGGCAGTCAATGTTGGCGACCGTACCGCACTTTTAAATTGAACGAAAAAGGGTAGTTTTAACCCTTTATTTTTGCTCTTTAAAAATGTGCTTTTAAAACAAATGGTTGCAACGGGTGGTTTTTAACAAGGTAAAAAGATGATTTTTATCCTAACAGCCTGTTGCAGCTTATTTTTATCGGTTTATTCTATT # Right flank : | # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 5640-5132 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOJV01000046.1 Vibrio cholerae strain 195V0316 NODE_46, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 5639 28 100.0 32 ............................ ACGCATGGAACAACTTGACTTTGCTCTTACCG 5579 28 100.0 32 ............................ GCAAGCCAAGTACCTATACGAGCAAATAAAGC 5519 28 100.0 32 ............................ AGTTCGCGCCAGTTTTCAATGCCGGCCTCTTT 5459 28 100.0 32 ............................ TTCAATTGTGCGTGGTCTGGTGAGTTATATCG 5399 28 100.0 32 ............................ ACTAGCGATTCCACAGGCACAGATTGTTGCAG 5339 28 100.0 32 ............................ TCGTCCAGCTCAGCAGCAGGCACGCTCTTCAA 5279 28 100.0 32 ............................ AACACGGTGACGTGCTTGCCTCGTCCTGATAC 5219 28 100.0 32 ............................ ACTGGCGGCATTTTGTCCCTAGCTGCTATCTG 5159 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 9 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : AAGCATTGGAGCACAATCGTCCTTTCTATCCCAATGAAATATATGAGGTATTAGATCATGTTTGTGAGAAGTGTCGCCATGAAAGTATCGACAGTGAATATATAGAAAGGAATAACGCCGAATATTATAAAGAAGCTAGAAAAAATCAGCAGGAAATTGTCACCCTGATAAACAGTGCGTGCGATAAAATTCGAGCTAGATTAGGCGAGGTTCGTGTTAAATGACACTGCTAACAAACGCCTCAAGAGGGACTGTCAACGCGCGGCGTTTCCAGTCCCATTGAGCCGCGGTGGTTTCGGCTGTTGTGTTTGAGTTTAGTGTTAATGCGTTGTCAGCCCCTTAGGCGGGCGTTAACTGGCAATGAAATTACCCATCTTTTTTCGCTGAGTTTTAAGTTATTGATTTATATTGATAATAAATCTAGTAAAAATAAAAGGTTATTTTGGGAAATTTGATGTAATTACTATTATTAACAATAGGTTACTGCTAAATTTTTTATA # Right flank : TATTTATAACTTTGGCATTTGGGATCGGCCAGTTAACAAACGCCTCAAAGGGACTGTCAACGCGTAGCGTTTCCAGTCCCAATGAGCCGCGGTGGTTGCAGCTGTTGTGTTTGAGTTTAGTGTTAATGCGTTGCCAGCCCCTTAGGCGGGCGTTAGCTTCTTAAAGCGAAAATCATGAAAATCTGGGTTTAATTGCTTTGAAAAATCAGCTTTTAGCATTCAAATTTCACAACTTAGCTTTCGAGTTTTTCTGATGCTGATTTGGTAGAAAGTGTTGAAAGTTCAGCAGGTTCAAAGCCGCTGAAAACCCACAAGCCTCGATGCTTTAAGGTTGTTGGGTGTTCCACACGGCAAGTTTGGTTTCACAAAAGGCGGCATCATCGCTGTGATCTTGCTTTCTTTGTCGTGGACTCTTAACCGGGGCCAACTTAGCCTAGATCGTTTTAAATTTTGGCAGCCAACTTCACAGCTTTTGGCGTTGGACGTGTGTTTGTATGATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [58.3-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 48-4097 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOJV01000053.1 Vibrio cholerae strain 195V0316 NODE_53, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 48 28 100.0 32 ............................ ATCTGGGCAAGCTTCTCACGTATTGCGTCACA 108 28 100.0 32 ............................ TTGTTGCCCATCATCGGCCTTTTCTTGTGGGT 168 28 100.0 32 ............................ AAGAAGATGGAGCGAAGCTACATAAAAGCCTT 228 28 100.0 32 ............................ CTGCACAGCCGCACAAACTGAGCCCAGTTGAT 288 28 100.0 32 ............................ AAATATTGGCGACTAGGGCAGTGACACCCACA 348 28 100.0 32 ............................ TGAAAGCTGGTGTTGCTGCCTGTGAACATGCG 408 28 100.0 32 ............................ CGTGAAGTCGGCGTGCTGTGCCAACTGCCCGC 468 28 100.0 32 ............................ CTACGCGGACGCTTTCCCGTCCAGCATCTTGC 528 28 100.0 32 ............................ TCCCTGATTCCAACTAAAAACTATTGCCCGTT 588 28 100.0 32 ............................ TGTCGCTCCATCGTAGAGTGAATCACCCAACG 648 28 100.0 32 ............................ GCTCACGTTAACGCTTTTGAGGTTTATGCGGT 708 28 100.0 32 ............................ TCTCATGAGGTAATGGTTAGACTTCATTTAGC 768 28 100.0 32 ............................ TGACTGAATTCTCTAACCAAATGTTCGCACTC 828 28 100.0 32 ............................ AGAACACATTGCCGTTTTCGTCTTCAATAAGT 888 28 100.0 32 ............................ TTGAATCATGGCAGCGATATTTGTTTTACCCT 948 28 100.0 32 ............................ GTACATATCAGAGACAAACGCACCATCGTATC 1008 28 100.0 32 ............................ TGCCATCACCTTCGATTTCTTCACCGTTGGTT 1068 28 100.0 33 ............................ GGTTACCATTTAACGTTTAAACAGCTTTGATAT 1129 28 100.0 32 ............................ TATAGTCATAGTGGGTAAAGATTCGTTCCGTG 1189 28 100.0 32 ............................ CAACCCATCAACTCACTCAGCGACATAGTGGC 1249 28 100.0 32 ............................ ATTTCGGGCCACTGGTCATTGATTCGCCCGCG 1309 28 100.0 32 ............................ TAGTGCGCTTAACTCTGCGTGATGAGGCGGGC 1369 28 100.0 32 ............................ TTTACACTTCACTGACCGGTCAAACACCACGC 1429 28 100.0 32 ............................ TGAATCAAGCGTGACTTTACTCATCGCCTTTT 1489 28 100.0 32 ............................ AAGCACTGGAACAGGCCGACGATGAGATCAAC 1549 28 100.0 32 ............................ GTTTTCCCTGATATGCATTGTTATGGTTTGTT 1609 28 100.0 32 ............................ CTGCCCCCGTTTGTGGGTGGTAGCCTTTGACC 1669 28 100.0 32 ............................ AATAGTGGGTTATTGGTTAAATTACTTAACGC 1729 28 100.0 32 ............................ TTGGTTGGTCATTTCCAATGGGAAATTGAGCG 1789 28 100.0 32 ............................ TTTGCGGTGGTGCGAAACTGACCTTGAATCAT 1849 28 100.0 32 ............................ TTTGAGCTTGTTTATCTGGCTCATTTGGGTTT 1909 28 100.0 32 ............................ AGCAAAAGACGGATCGAGAAAGGCCACTGTTT 1969 28 100.0 32 ............................ CCATTAGACCAATTGCCATATTTTCTATCTCC 2029 28 100.0 32 ............................ TATATGGGCATGTTTAGCAATTACGGCATTGA 2089 28 100.0 32 ............................ TCAAAAAATGGCTGCGGTTGGCTGCTGATTAA 2149 28 100.0 32 ............................ TTAGATAATCTAGGTTCGAACAATACGTTAGT 2209 28 100.0 32 ............................ AATTTCATCCAGCTACGGATTTTCAGGGTTTC 2269 28 100.0 32 ............................ TGCAAAGTGACGCCAATTTAGGGCGTCACCCT 2329 28 100.0 32 ............................ TTAAAAGCTCCGTCTGTCCTGAACCAGTCTGA 2389 28 100.0 32 ............................ TACACCAGCACCAACACCAGCACCAGCACCAA 2449 28 100.0 32 ............................ CGGAACGAATGCGCAAATCACAGACTCAGCGC 2509 28 100.0 32 ............................ CTTCGTTTCAACAAACGTCAGCTTAAACTCAG 2569 28 100.0 32 ............................ TGATAGACCCATTGACATCAGGATCTTTTTCT 2629 28 100.0 33 ............................ GAGCGAATCAAGAGAGAAGAAGCAAGTTTTCAT 2690 28 100.0 32 ............................ ATGCACTGACTGAAGATGTGCTTGGCACGATT 2750 28 100.0 32 ............................ ATTAATGCCGCTTGAACTTGCTCCGGTGATAA 2810 28 100.0 32 ............................ TAAGACCGTTTCCGCCAAGCTTTTCAGGTCTG 2870 28 100.0 32 ............................ CTATCGAACTGATTCAAGCTTTGCCAGCCAAG 2930 28 100.0 32 ............................ CGGCGTTTCCCATTGACCGTCTTGGGCGATAC 2990 28 100.0 32 ............................ TAGAGCGAAAAGCGGGCGCGATTGAGCAGTTC 3050 28 100.0 32 ............................ TAACGGAACTGTTTCAATTACTCGCTTACCCG 3110 28 100.0 32 ............................ TGCCGCTTACGTTGTGGCGTTAGACGTTTAGC 3170 28 100.0 32 ............................ AGCTCAGGCACAGGCGTATGAGAAATGCCGTA 3230 28 100.0 32 ............................ GCTATTTTCGATTCTAGCTGCTGAATTTTTGT 3290 28 100.0 32 ............................ TTCTCTATTGATGCCCATTTTCCGGTCTTTTC 3350 28 100.0 32 ............................ TTTAACGGGGAGAAGTTTCTGTTTAGCCACAT 3410 28 100.0 32 ............................ TATGCCGTCTTTCATAGAGCTTGAGCTTGTCA 3470 28 100.0 32 ............................ ATCCAGCGATCAAAAGCGGTTTTTCGCTCTTT 3530 28 100.0 32 ............................ ATGGTGAAATACAGGTGACGGCGCAGGTTATC 3590 28 100.0 32 ............................ CATAGCGCCATCACGATGATTAACGTACCACC 3650 28 100.0 32 ............................ ACTTGCACCCATCGGTTCCCCGTGAATTGCCC 3710 28 100.0 32 ............................ TTAGATTCTTGGTTTGATGGTTTTGTTTTGTC 3770 28 100.0 32 ............................ AAGCATTTGCAAAATGCCTCTGTAGCCTTGAA 3830 28 100.0 32 ............................ TCAACATAGACCTGAGATCCTTTTTTCAAAAA 3890 28 100.0 32 ............................ GATGAGCAGCTTGCACAGTTAACAGCCACCGC 3950 28 100.0 32 ............................ AATTAAGCCTGTTTATTTGAACTCAGCGTTAA 4010 28 96.4 32 ...........T................ ACTTGGCTTCAACGACTTCGGGTAATACCCAC 4070 28 96.4 0 ...........T................ | ========== ====== ====== ====== ============================ ================================= ================== 68 28 99.9 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CAGGCAGCTTAGAAATACACCAGCACCAACACCAGCACCAGCACCAAG # Right flank : CGCACCGTCGCCAACTGGCGAGTATGCCGCAAGTTCACTGCCGTAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [36.7-28.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 2-1049 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOJV01000023.1 Vibrio cholerae strain 195V0316 NODE_23, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 2 28 100.0 32 ............................ CGCACCGTCGCCAACTGGCGAGTATGCCGCAA 62 28 100.0 32 ............................ TCGATAAAGCGCTAACTCATCTTCGAAGTATT 122 28 100.0 32 ............................ CGATGAAGTTTACGCCGACGAAGCGAGTGTGC 182 28 100.0 32 ............................ GTCACTAACCCTAATGTAGCCACACCGGGTAC 242 28 100.0 32 ............................ GGTACAGTGGAACGATAACGGAAGACATTACA 302 28 100.0 32 ............................ TGTCAAGTGATTACCTGTTGCGTTAGGTAAAC 362 28 100.0 32 ............................ GACAAGCCTTACTCGATAGATTTTTGCATATC 422 28 100.0 32 ............................ CGCACCGTCGCCAACTGGCGAGTATGCCGCAA 482 28 100.0 32 ............................ TCGATAAAGCGCTAACTCATCTTCGAAGTATT 542 28 100.0 32 ............................ CGATGAAGTTTACGCCGACGAAGCGAGTGTGC 602 28 100.0 32 ............................ GTCACTAACCCTAATGTAGCCACACCGGGTAC 662 28 100.0 32 ............................ GCTCTGGCAGCTCACCGTAAGCCGATTAGACC 722 28 100.0 32 ............................ ACGATCAAGAGTCATTTTTCACATCCCATAAA 782 28 100.0 32 ............................ GTCACCAAATACTCAGACGCGCCAGCATGGAA 842 28 100.0 32 ............................ AAGACTCTGCTTAGACGCAGAGCATCGGTCTA 902 28 96.4 32 ..........A................. TGCAACAAACCGAGCGTGCAAGGCACATGGCC 962 28 100.0 32 ............................ CATAAATTCAAGTTGCCGCGCTTTGTCTGGTA 1022 28 89.3 0 ...........C.............TT. | ========== ====== ====== ====== ============================ ================================ ================== 18 28 99.2 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CG # Right flank : AGAAAGTAAATCAAACGAGGCAGTTCACTTTCTAGATTACGTTAAGGTTCTTACGTTCTGCTACGTATATTTATTAGGGTTTTCTTAAATGGTCTTTTCCCAAGCATTAGTGACAAATTTCCGAGGTGTAATGATTAAGATAGCCCAGTTGATGAGTATCAGTTGAGGGGTAGTCACCATGAGCATCGTTGGTTGTGTTAATATCAAATCCAAGTATATCGATCGAACATGTCAGATGGTCTCGTAAGCCAAGTTTTACTCAGGGCGAGTTTTGCGTCAATAAAAATCCTTTTAGAATCATAACGTAATGAGCTATTGGATTACATCAGCTTCCATGTCTTAAGTGGAGGTTATATTCTAGATTATTTTCAATTGCCGAGTACCAGTCACAGATAGGCTACCTTTGGCGGCCTCTTCTATATGTCCGCTCCACCAGCTCATCATTGGCTTTCTGCGTTCTAAGTAGTCAGTGCGGTTATAGGCGCTACGCACTTGGTTGT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //