Array 1 47476-46458 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRUK01000004.1 Dorea formicigenerans strain AF25-11 AF25-11.Scaf4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 47475 32 100.0 33 ................................ ATATGTAAGGACCTCATGCTCTCTTTCAAGCTG 47410 32 100.0 34 ................................ ACCATTCTTCATGTCAGAAATGGCATCTTCTAAG 47344 32 100.0 34 ................................ AATTTTAAAAAGCGTGAAGTTTCCGTCAGCAAAG 47278 32 100.0 33 ................................ ACGTGTGGATAATGCTCCAAATTCAAGGTTTGT 47213 32 100.0 33 ................................ GATAATCCTTTAATAGCCATTTATATCTTTACC 47148 32 100.0 35 ................................ TTGTAAGCAATCACGAAACCGTGTGACCTCTTGTA 47081 32 100.0 33 ................................ ATTTGTGATAAGCCCATCTGCTGGAGCTGTAAG 47016 32 100.0 33 ................................ AACGATGCGACGGAACTGACAATCCAGTCCGCC 46951 32 100.0 34 ................................ ACAATTCCGGCGCTTGAAAGTCACACAGTAAGTT 46885 32 100.0 34 ................................ ATAAATACAGTAAACAATATATCAGCAAGTTATC 46819 32 100.0 34 ................................ ACAAAATGCGTACATCCTCCACAACCATAGCCCC 46753 32 100.0 34 ................................ ACAATTCCGGCGCTTGAAAGTCACACAGTAAGTT 46687 32 100.0 33 ................................ GTTTCATATGTATCAGAAACAGTCTGTTTAAAT 46622 32 100.0 35 ................................ ATTGCAAGCAGAATTATAGAAGAAGCAGAGAAAAG 46555 32 100.0 34 ................................ GATCACCCGTTATACCGAGAGATACCAGTGACAA 46489 32 96.9 0 ................A............... | ========== ====== ====== ====== ================================ =================================== ================== 16 32 99.8 34 GTCATCCTCCTCGTGAGGATGTGAGTTGAAAT # Left flank : ATGAGTACCCACCATTTTTCTGGAAGTAGGTGGTGAGCAGATGTTAGTTTTGATTACATATGATGTAAATACTCAAACTGTAGCAGGAAGGAAACGGTTGAGAAAGGTTGCAAAAGAATGCACTAATTACGGACAGAGAGTACAGAATTCTGTATTTGAATGTCAAATGGACGCAACCAAATGCAGACAAGTAAAAAGTATATTGGAGAACATTATAGATAAAGAGGTAGATAGCCTTAGATTTTATTATCTGGGTGAAAAATATAAAAATAAAGTAGAACATATTGGTGCTAAGCCTGGTTTTGATGTTAAAGATACGTTGATATTCTAGTGCGAATGATAAGTGCACATAAATTTTCTGGGATATTCGCACCAGAAAAGAAGAAAAATTAGGCTTAGAAATATATATGAAAATGAAAAAGATGTCAACAATAGATATAAACTGTTTATTATTGATATAATATGTGATTTTAAATAGCTTATTTTTGTTTAAAATTGCT # Right flank : ACGACTGCAAACGCTGCCACAAATCCAGCTATAAGTTATCCTGCTTGTGGTGTCTGGAATATATAGGATACAGTAATAAAAACTGTAAGGTTGTATATGAAGTCGCTATATAAGCACTTTATTCTATCTGGCGAACTAGACAGGCTCAAAAATCGTATTCTACCTTCGAGGGGTATGTTTTTTCTCTAAAATAGAGTACGATCAATATAAAAAAGGAGATAGCTAAATGGATTTTGTTAAGATTGGAAAATATATTGCAAGTAAACGAAAGTCCTTAGGGATGACACAAAAGCAACTGGCAGAAAAATTGGGTATGAGTGATAAGTCTGTTTCTAAATGGGAGCGAGGAGTTTCCCATAGTTAAAGATACCACACCAAATATGATGAACCCACGCTTATACACTACCAGCTATAATAAACCGCAAGGACAGCAATTTGATGATACTGCTGTCCTTTCTTTTATAAAATTGCAGTACACATAAAAAAGCTGTAATATGATA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCATCCTCCTCGTGAGGATGTGAGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.00,-4.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //