Array 1 437164-435190 **** Predicted by CRISPRDetect 2.4 *** >NZ_FTNZ01000001.1 Chryseobacterium joostei strain DSM 16927, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== =============================== ================== 437163 47 83.0 31 A.G.....AAAA....C...............A.............. TTCTAAAACTGTCAACCCCACATCATATGGC T [437146] 437084 47 100.0 30 ............................................... CAAAATTCAGAGGGAAGTTCATTTGTTGCA 437007 47 100.0 30 ............................................... AACCACCTTATTGATGCATGTAGATATGCT 436930 47 100.0 30 ............................................... TTAAGAGTTTCCGAACCGTCAGCATTTTTA 436853 47 100.0 30 ............................................... AATAAAGTTCTCAGGAACCCTAATCATTGC 436776 47 100.0 30 ............................................... TCCCACTAACATCGCTATACCCTTAACCGA 436699 47 100.0 30 ............................................... CTCCTGAGCAAGTTTCTTGATAAGTAGTGA 436622 47 100.0 30 ............................................... CATCAACTGATTTGAATCTATTCATATATA 436545 47 100.0 30 ............................................... TATAATAGCGTACAGGGTTCAATATAGATA 436468 47 100.0 30 ............................................... TGGAAAGCTTCAAAGCGTCGTAACTGGAAA 436391 47 100.0 30 ............................................... GAAATTTCCGATAAGGCTTTAACTTGTCCT 436314 47 100.0 30 ............................................... TTTCTCAAAACAAAAAGTGTAATAAAAGCG 436237 47 100.0 30 ............................................... AGTTAACATATTAATTTATTTAAGAACAGG 436160 47 100.0 30 ............................................... GGCTTAACTCCTGTTATAGTCTTTACTTTA 436083 47 100.0 30 ............................................... TCATATTATTATTTTCTAATTGGCATTCTA 436006 47 100.0 30 ............................................... TCTTTTTTCCCCTTCAAAATCTCTTACATT 435929 47 100.0 30 ............................................... ATTACAAAGTTTTGTTCTTTGTTCATATTC 435852 47 100.0 30 ............................................... ATTTTAATTCTGTACCACCAATTGACGCAT 435775 47 100.0 30 ............................................... GTAGTATAAAAACAGAAACCTACAACACTC 435698 47 100.0 30 ............................................... CAAATTTTAAAAAATATAGTAGAAAATGAG 435621 47 100.0 30 ............................................... CGGGCAAGGTATTATGAATTTTCGCGACAA 435544 47 100.0 30 ............................................... TAGTAAATAAAGACGGTACAACCGTGTCAC 435467 47 100.0 30 ............................................... TTTTGTGAAGAATACCTGCGATGCGGTACA 435390 47 100.0 30 ............................................... ACCCTGTCTCATAATCACAATATTTGCGCT 435313 47 100.0 30 ............................................... ATGTTACAGGAAGTAGAGCTGTACTACAAT 435236 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== =============================== ================== 26 47 99.3 30 GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC # Left flank : GATCAACTTTAATGGAAGTCATATCAATATTGAAGTTTCCAGCTACAACTTGTCCACCCTCAATGCTTAGATCCCCTGATTTTACGTTAAGAGTTCCCCAACGAGGAGCAAAACCTCCTTTATGGAATGCTTTCCAGTTAACGATAGAAGTTGCTGCATCTACTGCCAACACTTCTCCTTTGCTTTCTGCAACAGCTTGCTCAGTAGCTACCGCTGTCTCTGTTTTTTCTTTATTATTACAAGATGCTGCTAGCAATCCTACTCCTACTAATGCAATTACACTAAGTTTTTTCATATTATTGAATTGTTTAAAAAAGTTTAATCGAAATTTTTCTTGTTGTTTTTCGGATACAAAAATAGAAAAACCATATTTCTGTCATCTTAACATATATCAAGAAATGATTTTTTTTATATTTTATTGTTCATTTAAGAAAAACAAACAGCAAAATAGTGAATTTATTGCTTATTACAATGATAATTGAGAATTTTGGATAAGAAAA # Right flank : CTCAAAAAACAATCTACTGAAAATCAGCAGATTGTTTTTGTTTTTAGGATTCAAAATTTAGAATAACTCAAGCTGTTGAAAGGTTGGAGGTGGCTCTTCTTTATTTCTGGCAAAAAATATTTCAATATCTCCAAACTGCTTGTCAGTGATGCACATAATAGCAACCTTACCTGCTTTTGGAAGCATCAACTTCACTCTTTTAATGTGAACTTCAGCATTTTCACGACTTGGACAATGCCTCGCATACATTGAAAACTGAAATAAGGTAAAGCCATCATCAAGCAAAGATTTACGAAAGCGGTTGGCGTCTTTCATATTGGCTTTAGTTTCTGTCGGTAAATCATATAATACTAAAACCCACATAATTCGGTATGCATTAAACCTTTCGGCATTCATATCAGCTCAGGATAAGAGATCAGGCGTTTTTCTCCTGTATAACATCTATACAGTGATGTAGCGGTTGTTTTTACCGCAACCAATAAGGGTCTGGTTTTATCATC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.60,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //