Array 1 39935-40930 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_MJJL01000002.1 Campylobacter lanienae strain P0102 .11822_4_54.2, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                      	Spacer_Sequence                       	Insertion/Deletion
==========	======	======	======	=====================================	======================================	==================
     39935	    37	  97.3	    37	.......G.............................	TTAAAATCTCGATTAACTCATCACTAGGCACATTTTT 	
     40009	    37	 100.0	    36	.....................................	CACAATAATCTCAGGGGCTAAAAATGAGCTAACTTC  	
     40082	    37	 100.0	    36	.....................................	TTGTTGTTGGATGATTTGTCTATTTCACTAATTTTT  	
     40155	    37	 100.0	    36	.....................................	TTAAAAGCATTTACAAGCTAATTACCGAGCCGAGTT  	
     40228	    37	 100.0	    38	.....................................	CTACCTAGATTAAGTCTATATAGCTTTGATACTGGTTA	
     40303	    37	 100.0	    36	.....................................	GGAATGGCTTATTTGGCGTGGCTTAGGAGACAAGCA  	
     40376	    37	 100.0	    38	.....................................	CAAAATATCACTTCAGCAACACCAAAACAGCTTGCCGA	
     40451	    37	 100.0	    37	.....................................	AAAAAGCGGATTAATTCCGCTTATAATAAGTCCAACT 	
     40525	    37	 100.0	    37	.....................................	CTTGTTGTTGGATGATTTGTCTATTTTCACTAATTTT 	
     40599	    37	 100.0	    36	.....................................	TAGAGCTAATAGTGCTAAGAGCATAGATGAGTTAAA  	
     40672	    37	 100.0	    38	.....................................	AAAGTTACATTAGCTCTTAAAAAGCCTGTATCTATGAG	
     40747	    37	 100.0	    38	.....................................	ATAGACGCCACCGCCATCTTGCCTAAGGTTAGCAAAAT	
     40822	    37	 100.0	    35	.....................................	TGACGAAGCAAGAATTAGAAAAATATTTAAGACAA   	
     40894	    37	 100.0	     0	.....................................	|                                     	
==========	======	======	======	=====================================	======================================	==================
        14	    37	  99.8	    37	GTTTCAAACCAAGTTGGATTGTGGTATAATTTGCAAC	                                      	       

# Left flank :   ATAAGAGAGAGAAAAACTTCTCTTACTCTAAATCTAAAATAAGAGAAAATGAAGTTAAAGATAAAGAGATTTATTTGGGGAGATGATTAATAGCAATAATACATTATCATAATAATTATTTATAAATCTAAAAATTTTTTTTAATTTTTGATATTTTTAAATAATTCTATTATTTATAGCTTGAGTTAATATTTCCATTTTACTCTCCTAAAAATTGTTTAAAAACTTCTCTACATTATCACGCTCACAATATTTATAATATTGTGTAGCGATACGCATTAAAATCATCTCTCTCTTAAACTTATCAGCTCTGGCTCATCACTTTGATAAATTTTATATAACGAAGCATTTACTAAATCTATATCATCAAAATTAGCCGCTATACCTAATTCTGGGACAATCTCATCATTAAATAGCTCTATTTGCTCCCCTTTTTTTTGTAAGCACAATTCTAAAAGCATTTATAAAGTCTTGAGTGTTTGTAAAATTTTTGTATTTGT
# Right flank :  CACCGCACAAAATGCCCTATTTTAGGGACTTTGTGCTTAGTTAATTGTAAAATTTTTTCCACTTAGAAAAAAATCGCAAAAAGTGGCGAATTTGTGGAAAAATATGTTATAATTCAAGCGCAAATTATACCATAATCTAGCTTATAGCGTTTGAAATCACCACAAGGTGTTTTCATATCGGGGCAACTGCCTTTGGCACCCCCGGTTATTCTCTATCATCACAATAATTTTTAAACTCACATTGCGCACAAGCTGTAATGCTAGCTGAGCTTTGAGGGAAATATCCTTTTTCTAATAGATCTTGAATTTGCGTTAGTGTTTTATCAAAATAAGCTAAATCCTCTTTATAAATTTCAAAGATTTTAAATTTTAGATTATTTGAGTAGCATAAAATCACCCTATGAAAAGGCTTTTTAAAATATTTGCTAGCAAGTTTAGAATATGCTATAAGCTGCATTTTTGCGCCCTTGCTTAAAATTGGCTTTGATTGGTTTTTAAAC

# Questionable array : NO	 Score: 3.25
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTCAAACCAAGTTGGATTGTGGTATAATTTGCAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:64.86%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-1.90,-1.30] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [76.7-66.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.64,0.41   Confidence: LOW] 

# Array family : NA
//