Array 1 1401-1644 **** Predicted by CRISPRDetect 2.4 *** >NZ_ALAT01000197.1 Pseudomonas luteola XLDN4-9 contig000198, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ================================================== ================== 1401 24 100.0 49 ........................ CAGAGCGATACCTTTTCCAGCAGGAAGGGCTGGTGACCATGCATGCTAG 1474 24 95.8 49 ....G................... GTAGCTACCTTCGGGTATCTAGCCCTAGCGTGGACACCACCGCTACCCC 1547 24 100.0 50 ........................ TTCGTGAAAGGTAGAGATTTCTTAGTCTGCGTGTCTATCGATATGTAATA 1621 24 91.7 0 ........A.............G. | ========== ====== ====== ====== ======================== ================================================== ================== 4 24 96.9 50 TTTCACACTTATATATTGGAAACC # Left flank : CCAATCCGAAAAACTACCACGCGTCATTACCATAAATGAAGCTTATTCCCTGGCACTTGCCTATATCGACCGGGAGATTTCGCTGGAGGTTTGTCCAGATTGTGGAAGCCCATTTGTTGTCTTCTATAACACGTCCGTGACGGGCTCCTGCTGCCCGAATGATATTGCTCGTAAAAGACTGCATGACACGGTGATGGATGAGCGCAACCCTATGTGGCCAAGAATGAAAAAGGGATCGGTCTATGCGCCTGTGTTAGAAGAAGCGATGCGAATGTAGGCACTATCCAAGCGTGCAAAGGGGAGCCAGGCGGCTCCCCTTTTTTTGTCCAAATTCGCGCAGGAAGGGGATACCGATTCAGTCTGTACCACCCTATAGGTGTTACTGGGATAGGCGTCTTCTGTCGCGCGACAGAAGCTTATAGCGATATTGCTTTCCATTGGCTCGGGTCGCAGCACTCCAAATCTGTCTGCAGGTTGGGGCTGGTGAACATTAAATCTTG # Right flank : CTCAGCTGACCGTGGCCTTTGAGCATTGTCTGAAAATGGTGAATTTCAGAATTCGGTTTCCAATTAGATAAGAACAAGTTAATGAGGTCTCTTGTTTCCACGCGAAAGATCTGCTTTTCTAGGATCAAAATCGGGGTCCTGTCTGCATCTGGCTGCCATAGCCCATTTGGTTCTGCTTCATGACAGGCTCCTTCCTTCAGGGCAGCGAGTGAACGGAGGTAGTACCCATGTCAAGGCAGTACACGACCGCACAGCTTCAGGAGATGGCCCTGGGGGATACTCGGGTTGCAGACCTGGATATCGATGCCGGGACGCTCGTTGAGCTGTCACAGCAAACCGTAGCGAGCCTGGAAGAGCAGATTGAACGGCTGAACGCACTTAATATCCTTCAGGCCAAGGAGACGTGCGAATACTTCTGGATGGTTACCCGGCGCGAACAAGAACAAAACAAACAGTTTCCCAGACTGGGATCGCGAGTTCGTGTACTTAAAAACACCTTG # Questionable array : NO Score: 2.50 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:-0.20, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTCACACTTATATATTGGAAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.83%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //