Array 1 44005-47936 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABTWG010000016.1 Acinetobacter baumannii strain KAB23 MRSN613488_contig00016, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 44005 30 100.0 30 .............................. CAGGGTCTTTAATCGGTTCGGCTTTACCGT 44065 30 100.0 30 .............................. ATCAACCTGTTTGTGATGCTCTTACTTTCT 44125 30 96.7 30 ............................A. TTACAGACCGTAAAAGCCCATTCACAAAAT 44185 30 100.0 30 .............................. TCTCTATTCGCGCAGGGTCCTGAGTAATTA 44245 30 100.0 30 .............................. ATACAAATGTTTTTGTATTTGATAAGTGGT 44305 30 100.0 30 .............................. CAATGCAGCAAGGTTTGGAGCTGAAATGTA 44365 30 93.3 30 ............................AC AACTTTATCTAGGCCAGAGTGTTCAAATAC 44425 30 100.0 30 .............................. GCTGATGGTAAACAACCATTAAAAAGAACT 44485 30 96.7 30 ............................A. ATTCTGCATCTTTCCTAAGAACAACTCTTT 44545 30 100.0 30 .............................. AAGCATTTAGGGTCCACCATCTTTCTTTGA 44605 30 93.3 30 ............................AC ATGCCTTCATCTTCATCGAGATACCAGTCT 44665 30 93.3 30 ............................CA AATGCAGAACCACCCCAAGATCAAACAATA 44725 30 93.3 30 ............................AC TAAGAAGAATACGTTCTACTACCCCTATTG 44785 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 44845 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 44905 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 44965 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 45025 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 45085 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 45145 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 45205 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 45265 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 45325 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 45385 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 45445 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 45505 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 45565 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 45625 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 45685 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 45745 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 45805 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 45865 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 45925 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 45985 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 46045 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 46105 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 46165 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 46225 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 46285 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 46345 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 46405 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 46465 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 46525 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 46585 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 46645 30 100.0 30 .............................. CTCATCGTGAAGGTTTTGCAAATATGCCTT 46705 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 46765 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 46825 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 46886 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 46946 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 47006 30 100.0 30 .............................. CAACTGTGTAACCAGATTTCGCTTTAAAAG 47066 30 96.7 30 ............................A. CAATGTAATGCTCAGGCGATGCCTTATCAT 47126 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 47186 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 47246 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 47306 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 47366 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 47427 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 47487 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 47547 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 47607 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 47667 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 47727 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 47787 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 47847 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 47907 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 66 30 96.0 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.49 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.43, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //