Array 1 63530-61056 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSJJ01000014.1 Bacteroides uniformis strain AM30-49 AM30-49.Scaf14, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================== ================== 63529 33 97.0 32 ................................T ATTTTTATAATCAATATGTAGTTTTTTATAAA 63464 33 97.0 33 ................................C CGGGGACAGCATCATACATGCTGCCAACCTGGG 63398 33 100.0 33 ................................. CCGTTCAATATCGTAATGACACGTGCCGCTAAT 63332 33 97.0 32 ................................T GCCATTAAGCAATGGATAAAAGACAAGAACGC 63267 33 97.0 33 ................................T CGGGTGCTACCAACATAGCATCAGCCGCGAACA 63201 33 100.0 33 ................................. TGACTTCTGCCGCGCGTGTGAATATACGCACTT 63135 33 100.0 32 ................................. TCGATGAAATATGCAAGGCAAGACCTAAAAAC 63070 33 97.0 32 ................................C CGGAAGAAGAGCAGCGAATTTACGCAGCTGAC 63005 33 97.0 33 ................................C AGTTGACGGGTCCCAATTACTAAGCGTTCTAAG 62939 33 97.0 34 ................................T GGAAAAGGCGCAGGAATTAAGGGAAGCAGGTCTG 62872 33 100.0 32 ................................. GAACATGAAGCAGACGGGCGAAAGCGCGTTGA 62807 33 97.0 33 ................................C ATAACAACGACCCGATACAAGGAAACCATGTGT 62741 33 97.0 34 ................................T TTACGCTTGACATAACCACTGGAAGCTATACGGA 62674 33 100.0 34 ................................. ACCGTGCGAGCGGTTATCGCGCTACGATAGCAGG 62607 33 100.0 34 ................................. AAAGGGAACACTCCCCTATACACAAGTAAACAAA 62540 33 97.0 33 ................................T TTGCCAACTGGGCACGTAACGCGTCTACGCTGT 62474 33 100.0 33 ................................. TACGAAGGTACGGTTATACCGCCGGGGTAACAA 62408 33 100.0 34 ................................. TCGATGAAATATGCAAGGCGAGACCCAAAAACGA 62341 33 100.0 34 ................................. TAGATTACCTACGTTATGATGTGCTTTCAGAAAA 62274 33 97.0 33 ................................T TTAGACACAGCCTGCACAGTAAAAAATCGCTGC 62208 33 100.0 33 ................................. AAGATAGACCCGGAAGACTTTACACTGGAAAAG 62142 33 97.0 33 ................................C TACCGTAACATGTCGGAAAAGCGCGCAGATGGT 62076 33 97.0 32 ................................T CCCATTTCATCGTATATCTGTAATGCTTCGAG 62011 33 97.0 32 ................................T AACAATATGTAGTACTCCGATAACATTATAGA 61946 33 100.0 33 ................................. ACGCTCCCACATCCTTGCGCTGCATTTGCACAA 61880 33 100.0 32 ................................. ACCCATCGTTCAGGATACTCCGAATTATGGTC 61815 33 97.0 34 ................................T GCAAAGAACATAGTGATGTAGTAAGAGCAATAGA 61748 33 97.0 34 ................................T AACCTTTCCTCCTCGGTTGAATCGTCATACAATT 61681 33 97.0 32 ................................G AGACACACGGGGACATCAAGGCGTTAACTCTT 61616 33 97.0 33 ................................T TCCTAACGCTCTTAACAAAAGCTGACACCGATT 61550 33 100.0 33 ................................. GATTATGAATACTGCCTAATGGGATGGAATGAG 61484 33 97.0 33 ................................C TTTTCTCCTCGGCTAACCGGGCTTCATCTCTGA 61418 33 97.0 33 ................................T TAAAACTGCTCAGCTCATCGATAACAACCATAT 61352 33 97.0 33 ................................C TCGTAGGTGTCCCAATTACCCGCATCATTCGGG 61286 33 97.0 34 ................................G ACTTAACATTAATCGTTATCTTTGCCGTTACAGT 61219 33 97.0 33 ................................T TTTCAAGTGTGCATTCAGTGTTTTTATATTACA 61153 33 100.0 32 ................................. AAATCTTAAACAATTTGCCTATTTTCTCCTCT 61088 33 93.9 0 ..............A.........G........ | ========== ====== ====== ====== ================================= ================================== ================== 38 33 98.0 33 GTCACACCCTACGTGGGTGTGTGGATTGAAACA # Left flank : TGATGATTATCCGGTATTTCTAATAAAATGAATGCTGATTATGTATATTCTTGTAACTTATGATGTAGATACTACGAGTAAAGCAGGTGCACGTCGCTTACGGTGTGTGGCTAAGGCTTGTATAGATTATGGGCAGAGGGTACAGAATTCTGTCTTTGAGTGCGAGGTGACAGAGGCTCAATATTGTCTTTTGAAAGAAAGAATCAAGAGTATTATTGATATATCGCTTGATAGTATTCGTTTTTATATCCTCAGTAAGAATGAAAATAGGAGGGTAGAGGTGTTAGGTGTTGATACTGCTTATAAAGTGAATGATGCGCTTATTATATAGCGCGTGCGAATGTGTAGTGTTACATAAATAATAGTATTTTCGCATGTGCTAATAATCAGTAGATTGGTTTGTTTGTGAAGCATTTTTCTTTTTGTGAAATCGGGAAAAGTGATGATTCGCATAATAATGGATTAAACTTACTGGTTTGTAATATGTTATCTGCCATAGC # Right flank : CTACAAGGCGATTTGTGACTTGGCTATGCTGAGTTTATTCTCTATGTGAGGAAGGGAGAATGTATTTTGAGCAAAGGTATTTATGTCTTGGAGCATAGCTACCACATTGCCTGTGGTGGAACATATGAAACGGAGCTTACCACTATACAGTGTGCATATGCTCCGGAATACGCTTCGCATTCGGCGGGAGGAACAATCGTGGTCAATCAGTGTGATTAGAATTGAAATGTAAATATACCTTCAAGCATCTTCTTCCTTGGTCTTCCCTTCCCTCTCTCCCAGCCCCTTTCTGTGCATGGCGTTTCTCCGACACCGGGGAACACTCTCTCCGGCACCGAGGAGGGCTGGGCTTCCCGGTGCCGGAGAAAATGAAACTTTTCATCCTTATCTGATTTCTTGATGAAGATGACTGTGTGACGCAATTTACAGAAATTGCGCCACGCTATTTTAGGTACTCTCGCTAAAAACACCTATTTTTGTCCGACTAATATTGAATGAGA # Questionable array : NO Score: 5.66 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.50, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACACCCTACGTGGGTGTGTGGATTGAAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTGCGTGGGTGCGTGGATTGAAACA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.70,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //