Array 1 2719356-2715548 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHMN010000003.1 Allocatelliglobosispora scoriae strain DSM 45362 Ga0373994_03, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 2719355 28 100.0 33 ............................ CTCACAGCTCACCATCCGGCAGCGAGCGCACAG 2719294 28 100.0 33 ............................ CGGGAAGTGGATCTGCTGCGGCGGGGACTACCC 2719233 28 100.0 33 ............................ GGGCTGCGAAAGCCAACCGGCGATTGCAGCCTC 2719172 28 100.0 33 ............................ GCCCACATCCTCGGCGACGAGGACACGGAGCTT 2719111 28 100.0 33 ............................ TATGCGGGCTGCGGATGGTCCGTTCGGTGGATC 2719050 28 100.0 33 ............................ CCCGTTGACCGTTCCGGCGGCCTGGGCAATGGT 2718989 28 100.0 33 ............................ CCGACGAAGAGCTCCGTCGTATCGCTGAGAGGT 2718928 28 100.0 33 ............................ CGAGCACACCATGTTCTCCGCCCAGGACGTGTT 2718867 28 100.0 33 ............................ GCAGCGGTTCCTGGCCTCTGAGGAGGTCCGTAC 2718806 28 100.0 33 ............................ GCAGATCCTGGAGGAAGCGGAGGGAATGAACGA 2718745 28 100.0 33 ............................ TCAGCTCCTATTCATGAATAGCAGTTACACGAC 2718684 28 100.0 33 ............................ CGCGGTGAGCCATACCGATAGCCCTACTGGCGT 2718623 28 100.0 33 ............................ CGAGGGCCGTGGCGCTGGAGACGAGTTCCGGCG 2718562 28 100.0 34 ............................ AGTCCTACCGGCTTTCTGATAATCCGAGGGGTAC 2718500 28 100.0 33 ............................ ACTGCCCGCGCGTCTGCTGGACACCGTGCCCGT 2718439 28 100.0 33 ............................ GGCGCCACCCGGGGCGTCAACACCAGCGAATGG 2718378 28 100.0 33 ............................ CCACACCCGCATGCTCGCGATGTCACCGAGCTG 2718317 28 100.0 33 ............................ CCCCTTCGCGGGATCCCAGAACTCCCAGAAGGC 2718256 28 100.0 33 ............................ GTTCTTGGATGCCGGTAAGAACGTGATCAGTGC 2718195 28 100.0 33 ............................ GACCCCGTTGGACCAGTACTGCCCGGAGTACCC 2718134 28 100.0 32 ............................ GAACCCGAACCCGCAGATGGTGACGACGATCC 2718074 28 100.0 33 ............................ GTCGGCGGAGGCGATGAGGCCCGTCTGGACCCC 2718013 28 100.0 33 ............................ AAAGGAAGCCATGCGCTGGTTCCCGGGAGTGGT 2717952 28 100.0 33 ............................ CTGACTGCGGCAGGAGAGGCGGTTGTGACATGG 2717891 28 100.0 33 ............................ GCAACAGGAGATCATCGAGTCGGTCCGGGACCA 2717830 28 100.0 33 ............................ GGTCGCTGAGGCGCTGGACGGGATCGCGAAGTT 2717769 28 100.0 33 ............................ GGCACTGGTATCTACGGGCCGAAGAAAACGCGG 2717708 28 100.0 33 ............................ GTGGATGGCTGACGACGATGCCGCGTGGATCCG 2717647 28 100.0 33 ............................ GTTCCGCAAGGTGTTCATGAAGGCCATGGGGAA 2717586 28 100.0 33 ............................ CTCGAACATCACGATCCGCATGTGCGTGCTGGA 2717525 28 100.0 33 ............................ CACGCCCGGTCTCGACGCGGCCATCGCCAAAGC 2717464 28 100.0 33 ............................ TGCGGAGTCCTTGAGCTTGTAGTTCGCGGTGGC 2717403 28 100.0 33 ............................ GCGTTACCAGCGGGAACTCCTCAGCGTCGACGC 2717342 28 100.0 33 ............................ TGCTCGACTTCACAGGTAAGACCTCACTCGGAT 2717281 28 100.0 33 ............................ GGGAAGAGAAACCGGTCACCAATACGCCACCGA 2717220 28 100.0 33 ............................ TGACCTCAAGCAACTAGCCGCCTTCTCAGGTAT 2717159 28 100.0 33 ............................ CTGGTGGAACCGTCACTGGCAACCCATTAACGT 2717098 28 100.0 33 ............................ GTGCACGCAGGTCTTGCAGCCGCGTGCCTCTGG 2717037 28 100.0 33 ............................ CCCGTGCTCGACTCGATCGAGCAGCTCGAAAGC 2716976 28 100.0 33 ............................ CCAGTCGGGCATCTGCGCCTTGAGCCACGCCTC 2716915 28 100.0 33 ............................ CGCGCGAGCGTGTCCGGGCCCACTGAGCCCGGG 2716854 28 100.0 33 ............................ CGCGTTCTTGGCCCAGTACTGCACGGTGTCCTC 2716793 28 100.0 33 ............................ GGTGGAGCTCATCCTGCGCACGGCGGGCGGCGG 2716732 28 100.0 33 ............................ CACCCTCAACGACGCGTTCGCCACGTACTTCGG 2716671 28 100.0 33 ............................ CGGGGGCGTGGTGCCCTGTGCGTGCCGGGACTG 2716610 28 100.0 33 ............................ CCGGCCTCCGCGACCTCCAGCGCCCGGTCGGCT 2716549 28 100.0 33 ............................ GCTCCGTCCGAACGAGCCCCAGTGGCCCGTGCT 2716488 28 100.0 33 ............................ CGGCGGCGGCTCATCCGACACGGTGACGGTCTC 2716427 28 100.0 33 ............................ CGGTACGGACGATGTCGGCTTCGCTGTCCTTGA 2716366 28 96.4 33 ..........................T. GGCCGGAATGCCACTCCACGGCGCGCCTCCAGC 2716305 28 96.4 33 T........................... CGCCGGAGGCCTGGTGGTGACGGTTGCATTTGG 2716244 28 96.4 33 A........................... GATGTCGCCCCACGGCAGCCGGTAGCCGGCAGA 2716183 28 96.4 33 .....T...................... CCGGCGGGCTGCGGCCGCGACCCGGCGCCACAC 2716122 28 100.0 33 ............................ CACCCGGCTGGTCGTGGTGGTGCCCTCCACGGA 2716061 28 100.0 33 ............................ CAACGACGGCCACGGATGGGCTGTGATCCACAC 2716000 27 96.4 33 ...........-................ GTCGCGCTACGGCAGACAGCCGAGCACCTCCGG 2715940 28 100.0 33 ............................ GAGACGTGATGATCCCTGCCTCACGCGGTGCAG 2715879 27 96.4 33 .....................-...... ACCGTCGGCTTCCTTCGCCGCACCCTGCCATCC 2715819 28 100.0 33 ............................ GCCCTTCGCGAGACCCTGGTTCGCGGTGGCAGC 2715758 28 100.0 33 ............................ CTGTGCGCTGGCGTACTCGGCGCGCATGCACGG 2715697 28 100.0 33 ............................ GTTGTCCCACGGAGTGTGGTGCTGGTAGTTGAC 2715636 28 100.0 33 ............................ GAGCAGCGTGAACGAGTAGTGCCGCTTGTCCGC 2715575 28 96.4 0 A........................... | ========== ====== ====== ====== ============================ ================================== ================== 63 28 99.6 33 GCGTTCCCCGCGTAGGCGGGGGTGATCC # Left flank : TGATCATTGAGCCGGCTATCCGAGCCTTTGGCGACATCGATTCTGATGTGCTCGAGGTGCGTGCGGTTCACGCGAAGGCGCTGTTCGGAGCAGGCGAATATCGGGAGGCTGCTCGGCAGTTTCGGCTGCTCATCGACGACATGGCGGCGCTGAATGGGCTGGACAGCGAGGAGGTCCTCGACTGTCGGCTGCACGTGGCGAGGGCACACGCGATGGTTGGCGAGCCGCTGCGGGCGCTGCAGCAGCTCAAGGAGGTGCTCGATGATCGGTTGCGGATCCATGGGGCTGGGGACCCGAGCCTGGCAGAGCTACGGCAGGAGATCGAAGGGCTGAAGCAGTTGTGAGGTGACGCGGGCTTCGGGACTATTGTGGAATTGCTCGTGGGAGTCGTCAGTTGCAGATAGGTTGTTCGGGCCGTTCTAGGGAATAGATAAATGATCTACGAACTGCTAGTGAACGAAATAGCGGTGCTGGCGCCGCTGCGGCCCTGGTAAAACAGT # Right flank : CCAGCTGAACGCCTCTGAGAATGGCCTGCTCATGCTGGTCGGACCAGGATGTCGCCCGTTCCTACAGCTGTCTCGATCGGACGCACCAAGCCTCCACGGACTGGTAGGTTCCGGCGGTGAGCGAGCACCTGCCCGGTGGCGGCGAAGAGCTGTCGCCCGCCGACATCGACGCCCTCCCCGCCAGGTGGTCGGGCTGCTGGACCCCGAACGAGGTTGCGCGCCAACTGGCCGGCGTCACCACACCCTGGTACGTGGCCGCGGGCTGGGCGCTGGACCTGTTCCTCGGGGCGCAGACACGCCAGCACGGCGATCTCGAGATCGCGGTTCCCGCAGCCGGGTTCCCCGAGATCCGCAACCGCCTCTCCCACTACGCCTTCGACGCGGTCGGCAGCGGCCGAATCTGGGAGAGCCCCTCGCCCGAGGTGCTGGCCGCCACCCACCAGACCTGGCTCCGCGATCCGGAGACCGGCGGCTACCTGGTGGATGTCTTCCGGGAACCG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGTTCCCCGCGTAGGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGTAGGCGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.90,-13.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 2732368-2734236 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHMN010000003.1 Allocatelliglobosispora scoriae strain DSM 45362 Ga0373994_03, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ============================================== ================== 2732368 28 100.0 33 ............................ TCCTGATGATGCAACGTCGATGGAACCCGTTCC 2732429 28 100.0 33 ............................ CGGTTTCAACAGTGCGGCGACCGGTGTCCGTGG 2732490 27 96.4 33 .....................-...... GCACGGCATCCGGGTGCTGGGCGTCACCCCGGG 2732550 28 100.0 33 ............................ GCACAACCAGACCACCCCGTTGCCGCCGAAGGC 2732611 28 100.0 33 ............................ GTACGCGTCCACCAAGGATGGCGACATCTTCGC 2732672 28 100.0 33 ............................ GCGCGCCGAGGACCGACCACATCGCGGGCCGGA 2732733 28 100.0 33 ............................ GTCAGGACCGAGGCGGGCCCAGCGATGGGACCT 2732794 28 100.0 33 ............................ CTCACCGCCGCCGAGCGCGAGCGGTTCAGCAAC 2732855 28 100.0 33 ............................ GTTGCGCATCGGGGTGACCGCGACGATCTCCAC 2732916 28 100.0 33 ............................ GGCGCGAGTCTGGTCGATGAGACGCATGGTCTG 2732977 28 100.0 33 ............................ GTGCCTCACGACCACGCCAGCGGCGGCGGCGGC 2733038 28 100.0 33 ............................ TGTGGATCGTGATGTTCCTGAGGTAGCCATAGC 2733099 28 100.0 33 ............................ CAACGTGAAGCTGCTAAGCAGGAAGGGCGCAGA 2733160 28 100.0 33 ............................ GGGAGATAGCGAATGTCTATCCGTGCAGGCGTG 2733221 28 100.0 33 ............................ CATCGTCCGCAGGAACGCGTGCACGGTGTCCAC 2733282 28 100.0 33 ............................ GACCTGGGAGTCGCTGGGCTGGGAGCCCTCCGC 2733343 28 100.0 34 ............................ CCATTCTGCGGTACAGGGCGGGGACCACGGACCC 2733405 28 100.0 33 ............................ GTAAGTCGCCACAGGAGGGCCCGGAGCTTCGGC 2733466 28 100.0 46 ............................ CGCCACGCCGCACCCCATCGCCATCTGGCCGGCGGACGCCCCCGAT 2733540 28 100.0 33 ............................ CGCCGTGCACGCGTCGCTGCGGGCGCACGGATG 2733601 28 100.0 33 ............................ GCGGAGAACGACGAGGACCTTGCGGCGGTCCTC 2733662 28 100.0 33 ............................ CGGGGGGCATGGGGGCGAACCCGGGCACGGGAT 2733723 28 100.0 33 ............................ CGGCGGCCGCCTACGGGGCAGGCGCACCGGGCC 2733784 28 100.0 33 ............................ GGCCTGCGGCTGACGGGTCGACGCACCACCACT 2733845 28 100.0 33 ............................ CCCGCATCCTCGGCCTGCTCCACGAGGACACCC 2733906 28 96.4 33 ......G..................... CGCCACGTGCCACCACGGGTAGTCCCGGTGCGC 2733967 28 100.0 33 ............................ CTGGAGGTTCGGGCGATGGCTGTAGCTGTGGAT 2734028 28 100.0 33 ............................ CCACGATTTCGGTCTCGCCCCGGGCGCTGAGCT 2734089 27 92.9 33 ...............-.C.......... GTAAATCGAGACGAACCCAGTGGCCGACATGGT G [2734098] 2734150 27 82.1 32 CG...-.....A.T.............. GGGGCAGAACACCCCCACCGGGTCGACCTGTT 2734209 28 92.9 0 ........T....T.............. | ========== ====== ====== ====== ============================ ============================================== ================== 31 28 98.7 33 GTGCTCCCCGCGCATGCGGGGGTGATCC # Left flank : AGCTCTGGGACGAGACAGGGATCGAGCTTGCGGGTGGGCGCAACCACGGAGATTTCATCGACTGGGACGATGTATGACGGTCATCGTTCTGACCGCTTGTCCGGCAGGTTTGCGCGGGAATCTGACGCAATGGCTGCTGGAGCTGTCGGCAGGTGTCTATGTTGGACATATCAGTGCGAGGGTGCGTCAGCGGCTCTGGAGCCGGGTGGTGGAGATGGCCGGACCCGGCCGCGCGCTGATGGTCTTCCAGGTGCGCGGCGAGCAGCGGCTTTCGTTTCTTGTGCACGATCATCATTGGGTACCGGTCGATGTCGACGGGGTCGTGCTGATGCGTCGGCCGGTGGAGAGTGTCCTGCGGAACGCTGCGCTGCCAGAAGGGTGGAGCAAGGCGGCGAAGAGGCGGAAGTTCGGCCGGAGGAACCGTGGCGGGGGTTCCGGGGATGCCAGTTATAGTGATGAAAATTAGCCGGGTTGATCTCCGGCGCCCCAGGTAGACAAGT # Right flank : CAGAGCTGTTCAGTGAAGCAGAGCGAGAACCACAGGCTTCCTCGACAGGCGCGATCCGATGATAGGAAAGCCCGGCCGCTCCCGCCTGCCGCGCGCTGCCACGGTCCCGAACGCGTCCGAATCGTGGCAGCCGCAGACCGTACGTTGATCGCCGTGAATCACGCGAATGCGGGCTCCCCTCCCAACCGCACGGAGCTCGGATCGCTGAAGTTCTTCGGCAGGAGCACGACCTTCTGCTCAGGAAAGCAATGCCCTCCATAGTGGAATGACTGCGCACAGCTCTGTCCGCGAGTCTCCGTGGTCAGAGCCCGCCGGGCGAGCGCCGAATACATGAAGCAGTGCTTCAACCACGCGGCCTCCTCGCCGTCCCGGCTGAATCCTCGGCCACTCGCCGCATGCCCGAATGCGTCATGAACGGCGCGGAACATGTCGTTCTCCCGGTCGGTCAGGAGCGGATGCGGGTTGCCGGCTCCCCTGGTGGAGAAGACCTTCAGCCGCCG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCATGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCATGCGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [6-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-C/E [Matched known repeat from this family], //