Array 1 1097748-1097959 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP041651.1 Streptomyces sp. RLB3-5 chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1097748 29 82.8 32 TC.TC.................C...... GCCAAGCCATCGACGGGGAAGGGGAGTCGGCT 1097809 29 100.0 32 ............................. TCGCGTTTGGTGACGTATGCGCTGATGTATTC 1097870 29 96.6 32 .......................T..... AGCACCGCCGCCGACCCGTCCGCGTGCGGCAC 1097931 29 96.6 0 .................T........... | ========== ====== ====== ====== ============================= ================================ ================== 4 29 94.0 32 GTCCTCCCCGCGCAGGCGGGGGTGAGCCG # Left flank : GACTCCACGGCCGGCGCGGCCTCAAGGCGGGCCAGCCAGGCGCGCACGACGTCATGCAGCGGGGTGAGACTGTAGGAGTGCCGGGAGTCCTCCAGTGCCCGCGACCAGTCCTGCTCGAACGCCGGCACCCAACTCTCAGCCCGGGCACTGACACGGAGCTGAGCGAGCAGCTGCGCGGCCGCGGTCGGCGCGATCGGCGCCGGCGGGACAGCCGCGTGATCGGGCTGGGCACTCATCGCCACCTCCAGGCAGGTCCTGACGCCAACGGTACGCGCGCCCCGCGCCGCCATCCAGACGATCCGTCAAAAACTGCTGGTCACCACCAGCGTCGGGCTGGCCCCGCCCTTCATCGGCTGCCGCCAGCACTGAGGATTACAGCGAGGACAGCGACCAGGGCAGCCACGGTTGCAACGCCGGCAGTGACCGGACCGTTCAGCGACGGACGTCGGTGAACCAGGGAGGACTACGGGCCGCCGGTCGGTCCCGCACAGCTGTACCCG # Right flank : GCCCGGAGAGCTCCTCGCTCCGAAGGGCTGACGCGCGGACGCCCAGGCCCGCTACGTTGTCGCCCTCACCGCACACGCCTTGGGGAGCGCAATGAAGGCCATCTGGACACTCCTCACCCTGCTATTCGGCGTACTCACGCTCGGAGCCATTGCCAACGCCATCCAGTCGCTGACGGGCGCTGGAGCATCCGGCGCCCACAACAGCTACAGCATCAGCACCGGCATCATCGACGGCGCCCTGCAGCTCCTCTTTATCGCGCTTCTCGCGCTTGCCACCAGAGCCTGCTATCGGCGAGCCTCACGCGGCAACCAGCCCCGCCCCGGCGCCGACAGGCGACCCTGGGAACGCTGACAACACAGCGCCCGCCCCAAGTTGGCTCGGGCGCTACGCGAGTTCCGGACCATCTCCCCAACGGTCCATGGTCACAACTGTGTCACCGCCCTCACCCCCCACTCACACTTTCTTCACACCACCCGTTACGGTCACTCCACCACGAACC # Questionable array : NO Score: 3.75 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:-1.5, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCGCAGGCGGGGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [2,2] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCTCCCCGCGCAGGCGGGGGTGATCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.30,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [30.0-26.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1329996-1329572 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP041651.1 Streptomyces sp. RLB3-5 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================================ ================== 1329995 29 79.3 32 C..AC......CTG............... GAGGGACGCGATGAGCGGGCCTGCCACGCGCC 1329934 29 96.6 32 .......................A..... TCTTCTGCTACACCGTCGGTTTCGTCCTCCTC 1329873 29 96.6 33 ............................A GGCGGCAGCAAAGCCGCGCGAGTTGAAGCTTCG 1329811 29 96.6 32 ........T.................... CCGGACCTGATCCTTCACGTCCTGCGCGATGC 1329750 29 100.0 32 ............................. GCCATCACGTCGATGTCGGCGACGGCGGCGTT 1329689 29 96.6 60 .................T........... CCCGGAGAGCTCCTCGCTCCGAAGGGCTGACGCGCGGACGCCCAGGCCCGCTACGTTGTC 1329600 29 65.5 0 .C....A....A..C..CTT..G....GC | ========== ====== ====== ====== ============================= ============================================================ ================== 7 29 90.2 37 GTCCTCCCCGCGCAGGCGGGGGTGAGCCG # Left flank : GGAGTCCGGGGATCTCCTCGCCCGGGCCGTAGAAGTGCCGGAACCGCTGCCAGGGGACCTCGTCGTACCTGAACCCGTCCTTGACCTCCCGCGAGATCGCGCCCACGGCCGTCCGTACGTCGCAGTCCGTGCCGACCCACCGTTCCGGCCAGCCAGCCCAACGGTCATCGTCCATGGCTTGGCCTTCCAGTTCACCGACAGCATCCGAACCCCGGGAGTTTAACGACCGGTGATCAAGAGGCGGACCGCTTCTGCCGCACTCCGGTGGCACCGCACCACAGCGACGTCATTTCTCGTTCTCGTGAGCATCTGCAGCACTCAAGATCGCCATCTGCTGTCCAAACGCTGCTACTTCACGTGAACGAAGCCACCGGCCGGCTCACCCCCGCCTGCGCAGGGAGGACCGAAGAACGAAACGGCAAGAATTCCGGGACGACGGCTCACCCCCGCCTGCGCGGGGAGGACAGGGTCTTGGGAGGATCACTCTTTGTACCCGGCGG # Right flank : AATGAAGGCCATCTGGACACTCCTCACCCTGCTATTCGGCGTACTCACGCTCGGAGCCATTGCCAACGCCATCCAGTCGCTGACGGGCGCTGGAGCATCCGGCGCCCACAACAGCTACAGCATCAGCACCGGCATCATCGACGGCGCCCTGCAGCTCCTCTTTATCGCGCTTCTCGCGCTTGCCACCAGAGCCTGCTATCGGCGAGCCTCACGCGGCAACCAGCCCCGCCCCGGCGCCGACAGGCGACCCTGGGAACGCTGACAACACAGCGCCCGCCCCAAGTTGGCTCGGGCGCTACGCGAGTTCCGGACCATCTCCCCAACGGTCCATGGTCACAACTGTGTCACCGCCCTCACCCCCCACTCACACTTTCTTCACACCACCCGTTACGGTCACTCCACCACGAACCATCCCTGGGGGGACCATGTCGTACAACCAGCCGCCGCCACCGCCCGGATACGGGCCGCCGGCCGCCCCTGCACAGCAGCCGCCCAGGCCG # Questionable array : NO Score: 3.37 # Score Detail : 1:0, 2:3, 3:0, 4:0.51, 5:-1.5, 6:0.25, 7:-0.23, 8:1, 9:0.34, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCGCAGGCGGGGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCAGGCGGGGATGAGCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.90,-13.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [41.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //