Array 1 63385-64087 **** Predicted by CRISPRDetect 2.4 *** >NZ_LNGH01000017.1 Marinitoga sp. 38H-ov contig_24, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 63385 30 100.0 36 .............................. TTGTTTTTTATGATATTCATAGTATACTTATAAGAA 63451 30 100.0 39 .............................. TATTTTTTCTTCTTCCAAGCTTGGGTGCGTTATGTAAAA 63520 30 100.0 36 .............................. GATAAGTTTCGCATCCATCTTGGCGATATTTGTAAT 63586 30 100.0 38 .............................. TTTTCTTTTGTTACTTTTAAAGTCACCACTTCTTTTTC 63654 30 100.0 36 .............................. CCCATTTAAAAAATTTTTTTTGTTCTGTTTCCCATT 63720 30 100.0 39 .............................. TTTTCCTTCCATGTTCATCATAAAGTGGTTCATTTACTA 63789 30 100.0 36 .............................. GGAATATCTTCACTGATAGTTCTTTCAATAGAACTT 63855 30 100.0 38 .............................. ATGTCTACCTTTTCAAACACCCCAAAAGGGGTTAAAAT 63923 30 100.0 38 .............................. CAGGTCAAGCGGTCGTGATTATTTCAAATCTTTTATAA 63991 30 100.0 37 .............................. TTAACACAACTTCACCATATACCCAGTGCTTTATTAA 64058 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 11 30 100.0 37 GTTTTTAACCTACCTATGAGGTATGGAAAC # Left flank : ATAATTAAAAGTTTTTCATTAAAAAATTATGACGAAAAATATTGGAAAGGAAAATTGGAGTTTGAAAGTGTAGAACAATGGCATTATCCTTTTCTTTTATATTTAGAAACGTTTGGTATTGGAAATAAAATTGAAGAAGGATATGGAGAATTAGGCCGATTATAATCGGCCTTTTTTAAATAAATTTTTAATTTATTATATAATTATCAATAATAATATAAAAATTTAACATTGTTAAATAAAATAAAGTTTGATATACGAATTATAGCGTGAGATCCGGGGAAATAAAAATCGTCTAAAAATATTATTATTAGTGAATTACGATTTTGTAACCATGTAACGTTTAGGTTAATTCATAAAAAATAAGGAAAAATAGAGGGGATCCGGAAAGCAAATAAAGCTCTAAAAATATAATTGTTGAGCAATTTTACATTAAGTAAACTGCACGATAAAGGAAATGAAAAGAAAAGGTGTTATAATAATAATCAGTATTTCTACGT # Right flank : TCACTTTTTACAATTTCAACTGTTTTACCATTGTATTTTGCAACTCAAAAGTAAGCCAAATTATAATTGAAAAATGGGCCAAAAAAATAAAATGTTGAAAACATCCGTGTTTTAAACAATATTAAGTTTTTGTTAAATTCATCTTATTTTTTCATATATAACCTCCTTCATTCCAATGATTTGATAAATTCTTCGGTTTCTTTTAAACGATAACTATTACCATTCATATTTACTAAATATGCTTTGTGAGCCAATCTATCAATCATTGCTGCTGATAATACTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTAACCTACCTATGAGGTATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.30,-3.30] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 10740-14062 **** Predicted by CRISPRDetect 2.4 *** >NZ_LNGH01000030.1 Marinitoga sp. 38H-ov contig_36, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 10740 30 100.0 36 .............................. TTTTGATTCGCTTGAAAAACAAATTGAAACAACAAA 10806 30 100.0 35 .............................. TTATTTAAACATTCATTAGAACCTTCAACGGTAAA 10871 30 100.0 36 .............................. TATTATAAATCAACTTCCATTAAGTCTGATTTTGCA 10937 30 100.0 36 .............................. AAAAAAGCTGAAGAGTGGTTTTATAGCAGCGTTGGG 11003 30 100.0 36 .............................. TAAATCGCCTTATTTTAGGTCGGGAATTGTAAAGAA 11069 30 100.0 36 .............................. TTCAGTAGTCAAATTTATACTACCATTTCTTATATA 11135 30 100.0 36 .............................. GAAATCCTAAAAACAATGTACAAAGCAAAAGAAAAC 11201 30 100.0 36 .............................. GTTCTTCAATTTTCTAAATTAATAATTAAACATTTA 11267 30 100.0 36 .............................. TTTGGTATTGCGTTTCCTTTTATGTTTATTTGATTT 11333 30 100.0 35 .............................. GCAAACCCAGAAGCGCCAAAAGAAATTGGTAATAA 11398 30 100.0 36 .............................. TTTCTTTTGGAGCTTTCTCGAAACCAAAAATTTATC 11464 30 100.0 35 .............................. TAATCTTCTTATTGCTGATTTATTAGAACTGATAA 11529 30 100.0 36 .............................. TTCAAAGCTCCTAAAAGAGTTGTTCTCCAATATTCA 11595 30 100.0 36 .............................. ACTGCAAAAGGTGTTTTTACATTAAGGCTTTATGCA 11661 30 100.0 36 .............................. AGGCGAAACAATAGTTGCAGATGGAGTTTCTTTTTC 11727 30 100.0 36 .............................. CAAAAATCACATCAGGATATATCAATGCAGACAGAA 11793 30 100.0 36 .............................. ATACAATATATAAAAGAAAATATAAAAGAAAATATA 11859 30 100.0 36 .............................. CTGAAAAATTATCAATATGGTATTACTAGTTTATTC 11925 30 100.0 36 .............................. AAAACATATGCAACTTATAGAAATTTAGATATTTCA 11991 30 100.0 36 .............................. AAAGTAAGAATGAAATTGTTTGATAAGACTACAGGT 12057 30 100.0 36 .............................. ATTTTAGATACAATAAAATTTGATGAAGTATTAGGA 12123 30 100.0 36 .............................. CCTCTAAATTTTTTTCAACTGAAATTGTTTCCTCGG 12189 30 100.0 37 .............................. GATAATATAAAAATTGTTGACGATACCGTAGGTTTGG 12256 30 100.0 35 .............................. GATGACATTGAAGAAATCATCGAAGCGATTTTCGG 12321 30 100.0 36 .............................. TAAAATTGATGTTTTTAATACAATGAATTTTGACTT 12387 30 100.0 35 .............................. ACAACATAGCCAAAGTAGATTTATTCGCGAAAAAG 12452 30 100.0 36 .............................. GTACTCAGAGTACATATTGAAGTAGTTAGAAGGATA 12518 30 100.0 36 .............................. CAATTATTTTTGCATATTTTTGACTTATTTTGAAAT 12584 30 100.0 36 .............................. AAAAAAGCTGAAGAGTGGTTTTATAGCAGCGTTGGA 12650 30 100.0 36 .............................. ATTGAATAATCTTTCCTGCAACCACATTTGCAACTA 12716 30 100.0 35 .............................. AATCACATCGAAGTATTCGATGTCGGAGTAATTGA 12781 30 100.0 36 .............................. ATCAACATGCTAAACAAAATCAAATACTTAGCCAAA 12847 30 100.0 36 .............................. ATTTCTTCGCATCATTGGTTAAAAGAATATTTTTTC 12913 30 100.0 35 .............................. GATGAAAAAATGAGAGCGTCAAGGTTTAACGAAAA 12978 30 100.0 36 .............................. GAGATAAATAAATGGGTGGAAAAAGAAACAAAAAAT 13044 30 100.0 36 .............................. ATATCCAACCAACAATTTTTCCAGCTTGATAAATCG 13110 30 100.0 35 .............................. TCAAAAGCGGATTCCTTTCTTAAATCTTCATACTC 13175 30 100.0 37 .............................. CCCCATTTTTCTGCTATTTCTTCTATCAAATTTTCAT 13242 30 100.0 35 .............................. GATAACACAGTAGGCTCGCTATTTGCTTGCATGTA 13307 30 100.0 36 .............................. GAAGTAAGTTTTGATGTAATAATGGTAGATGGAGAT 13373 30 100.0 36 .............................. AAAAGTTTTGATTCATTCCGGGGGGTTGTAAGGTTT 13439 30 100.0 37 .............................. AAGAAAAGTAGTATATCAACAATGGAAAGAACAATTA 13506 30 100.0 36 .............................. GGTTTTGATGTTTTTATAATTTAAATGTCTGATAAT 13572 30 100.0 36 .............................. TCAATTGGGATTTCAATTTCTGTTTGTTGGATAGGT 13638 30 100.0 35 .............................. TTAGAAAAGGTTGAAAATTTAAGAATAATATTGAA 13703 30 100.0 36 .............................. TGAAAACGCATTACAAATAATGTTTGAATTGAAAAA 13769 30 100.0 36 .............................. AATGTGTGTTTGTTTGGATCAAAAGACTTTAACTCT 13835 30 100.0 36 .............................. ATAGAAGAAGAAAAAGCCTTGAATGTGGCTTTAAAC 13901 30 100.0 36 .............................. AACATTGTTGAAGCATTAGCCATTGCTTTTTCTGTA 13967 30 100.0 36 .............................. ATCAACAGGGTTATCTTCTTTTATTGTAAATGTTTC 14033 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 51 30 100.0 36 GTTTTTAATAGTCCATATTGGAATGTAAAT # Left flank : AAAAAGAGTATGAAGGTTTTACATTATGGTGGTGAAATAGATGTATATATTATTAGTTTATGATATTAAATTTGACCCAGAAGGTGATGGTGAGAAAATTTTACCAAAGGTGTTTAATATTTGTAAAAAATATTTATATCACATACAAAATTCTGTTTTTGAAGGAGAATTATCAAAATCAGAATTATATAAATTAAGACAAGAATTAGAAAAAGTCATCAGAAAAGATTTGGATTCGATAATAGTTTTCGAAAGTCGGAATGAAAGATGGTTAAAAAAGGAATTTTGGGGTGTGAAAGAAGATAAAACATCTAATTTTTTATAATTGTCTATGTGAAATATGACTTTATTTATGTTATATCGACAATTTATTTAATAAAGATTAAAAAACAGTTTTAGTTTTTTGATATATTTAAGGTGATAAATATTAAATAATTATATAAAGATAGACAAAAACAGCTTTTAAATGAATCTATAGTTATTGTTTTAATAATAATGGG # Right flank : TGATGTGGCAACAAGCCCAAAAGGAGGTGGGAAAATGGTTTTTAATAGCGGTCTGCCCCCTGGCTATTGGAGAAGAAATAAGGAAAACATTTACAAACAATAAAATCATTAAACTTAATTGATTTAAATTCTTCTAAGTCAGAATTATTATATTGATCATAAAAAAGATTAAAAACGAAATCTGGAGTAAAATAATATAAAGAACCATGAGGTCTGTTGTAAAAATAAATGTATGAAATATAGTAATTATAAACATCATCAATATAGTTAAATTCAATAGATTCAACAAATTCACGTTGAACGCTAGAATGAAATGACTCGACATAAGCTTGAGAGTTAGGATTATTCTTGTAACCAAATTCATGAATAATGTTTAATTCATCCATAAAAGCAGCAGTAATTTTAGCAAATGGACATTATCTGTCCTAATAATGAGATTATCAGGAGTAGCACCTCTTAATAGCTTTTCTTAAAGTTGAAATAAAGTCTTTAGCAAATTA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTAATAGTCCATATTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.20,-2.10] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [78.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 1 8693-11960 **** Predicted by CRISPRDetect 2.4 *** >NZ_LNGH01000007.1 Marinitoga sp. 38H-ov contig_15, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 8693 30 100.0 38 .............................. GCGGACATATAAAAGCACATTCCATCGAAATAGATAAA 8761 30 100.0 37 .............................. CTTTTTAATATTAAGTATATTCCTGTTCCCATTAATA 8828 30 100.0 38 .............................. CCCTTTCTGGTTTTAATTTCTATTTTATTTTCATACAT 8896 30 100.0 37 .............................. TAATGATTTGAGAATCATTATTGGTATTTTCGTATAT 8963 30 100.0 38 .............................. ATTTATATACCACCAGACGTTAGGTGGTTGAAAAACAA 9031 30 100.0 36 .............................. TATACCTAACTTTTTACATAAGTTTTCTACTAATTC 9097 30 100.0 39 .............................. ATCGCCGACCTTACCAATTGATAAGAAGATGCTATTTTG 9166 30 100.0 38 .............................. TAATTAATCCTTTTTCATTCAATAGTCCTTCAAAAATT 9234 30 100.0 38 .............................. CCGGGTTAATTGGTAGCTAGACGCTACCTCATAGCTAA 9302 30 100.0 38 .............................. TCCATGTATTCATCTAATTCCTCTAAAGTTTCAATAAT 9370 30 100.0 37 .............................. ATAGACACTTGTTAGTCCTATTGTGGATTCTGTATGT 9437 30 100.0 37 .............................. TCATCTAAAATGTCTTTGTGTGCCTTGAACATAATAA 9504 30 100.0 37 .............................. TCAATAATGTTTCTTACAGACCCTAATTCAAATTCTA 9571 30 100.0 37 .............................. ATATATCCTTCAAAATTGTTTCCATTATATATAATTT 9638 30 100.0 37 .............................. CGTTTCAACTCTTTTGCTAGTTCTACAAGAATTTTTT 9705 30 100.0 39 .............................. AAATTACTCATGCCTTCACCCCCACTTTAGGATTAATAA 9774 30 100.0 37 .............................. AAAATTATGTAAATAAAGTGTAAATGATTTTTATTTA 9841 30 100.0 37 .............................. TTGCTATATTGTTTCCATGTAACCAAAGTTTTATAAC 9908 30 100.0 38 .............................. CGGAAAGGTGGCATGTTGCCATTGTTCTTCGTAGCCGG 9976 30 100.0 36 .............................. CCAATTGACGGAGAATATATAAATATTCTTCATCAA 10042 30 100.0 37 .............................. CGGGGCGAAAGGTTATTAGCCTTTCGTCCCGTCTTGC 10109 30 100.0 38 .............................. AAAACTTTGTAAGTTTCCGCCAAATAGACTTCACATCC 10177 30 100.0 35 .............................. CTCTTAATTGTTTTTAAGATTTCTTTACTTTGAAG 10242 30 100.0 37 .............................. CTTCGTATGGACACCACATACAATAATTTCCTACTTT 10309 30 100.0 39 .............................. CATCAACACCGACAACGTAAATCGTGTCGGTTTTTAATG 10378 30 100.0 39 .............................. ACTCCCAACCATAACCAGAAGAAGATATTATTATGCTTT 10447 30 100.0 37 .............................. TGAATAATAAAAAATAATTTCCCTTGCCTTTGAATTT 10514 30 100.0 37 .............................. TTTTCAAGATGACTTCCTTTTGGAAGTCCCTATTTGG 10581 30 100.0 38 .............................. CTAAAATTCTCAAAAAAAACAACTTCAATCTTACTTTT 10649 30 100.0 38 .............................. TTCCACATAATTCAACCTCCCCGGTAGCGCTGCTTGCC 10717 30 100.0 38 .............................. TTGCCAGGTAGCACCCCTCCAATCTCGGGGTGATCCTA 10785 30 100.0 38 .............................. TGTTGTCTCTTTTATGTTTGTTAAGGCATCTTCTAAGT 10853 30 100.0 38 .............................. TTGTTACTTCTAGCCACATCTTCGAAGAATTGTAGTCC 10921 30 100.0 38 .............................. TCGCCAAGAGAGTTTTCTTTGTTTCTCTGATAGCGTTT 10989 30 100.0 37 .............................. TTGACCCCTTTCTAATACAAGTATTTCTATGTTTCCG 11056 30 100.0 36 .............................. GTGTGTAATGTCCGTTTACAAAGCGGGGTTCTACGT 11122 30 100.0 39 .............................. AGGGCAGATTTCCGCCCTTAAAATAAGTGTGTAATGTCC 11191 30 100.0 37 .............................. CGAAAAAACAAAAAAAAGGGGGGTAAAACGTGTTTGC 11258 30 96.7 36 .........T.................... CTTCTTCCCACTCTTCGGCGAAAAATTCAAAGCGTA 11324 30 100.0 38 .............................. CTATTTCTCCGTTTCCAAAGTAGACTGTTTCTACTTTG 11392 30 100.0 38 .............................. ATTTTCTACAATTGTAAATAACGAAACTGATAAAAAAC 11460 30 100.0 36 .............................. ATAAAATCTTTCGTTGCATTCCCAGCCTTGATGGGT 11526 30 100.0 34 .............................. TTATTTCAAATCTTTTGTAACTTTTGTTATACTT 11590 30 100.0 40 .............................. AGAATATACAGAGATATTATCTAGTTCTCCTTTATCGGAG 11660 30 100.0 38 .............................. TTTAACCAATTAACGAATGTTTCTATCCATTCTTCTTC 11728 30 100.0 37 .............................. GCCCCAGCCCTAAATGTGACTGGTTGCCATAATTTAT 11795 30 100.0 38 .............................. ATACAACATTATATTTTTCAGACAACCCCAATTTTTTT 11863 30 100.0 38 .............................. ATACAACATTATATTTTTCAGACAACCCCAATTTTTTT 11931 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 49 30 99.9 37 GTTTTTAACCTACCTATGAGGTATGGAAAC # Left flank : TCCCAATAAATTATTTGAGTGTTTTTAAAGGGAAATTTAGATTAGATATAATAATAGAAAAAAATAATGATGAGATATTTAAAGAAATAGAAAGTAACATAAAAGAATTTTTAGAATTTTACGGATTAGGTGCAAAAACATCAATGGGTTATGGAAGATTTAATATAAGTAGGCAGCTTTAAAGCTGCCTTTTTTATAAAAATTTATCCTTTTTTAAACTAAAAATTAACTATGTTAAATAAAATAAAGTTTGATATACGAATTATAGCGTGAGATCCGGGAAAATAAAAATCGTCTAAAAACATTATTATTAGTGAATAACAATTTTGTAACCATGTAACGATTAAGTTAATTCATAAAAAATAAGGAAAAATAGGGGGGATCCGGAAAGCAAATAAAGCTCTAAAAATATAATTGTTGAGCAATTTTACATTAAGTAAACTGCACGATAAAGGAAATGAAAAGAAAAGGTGTTATAATAATAATCAGTATTTCTACGA # Right flank : CAATCCAAAATGAAATAACACTATTGAAAGTTTTTAAATCTTAGTTTTTAACTTGCAGCGAAAACAAGAGGAATAAAAAATCTAGAACAAACAATTTAGTAAAAAATTAAGTAAATATAAAATAATAAAATATAGAAAAGAAGGCAAGAAGCCTTCTTTTTTTTTTTTTTTTTAAAAGCAAAATTTAAATGACTAATAATAATTCAAAAGAAAAAAGATATAAATAAATATATAAAATAAAAATAAAGAAAACATAAAAGAGTTAAATAAAAAAGATCAAATAAATAAGAAGATAAAAAGAAAAATTATATAAAAAAGGCATATTCAAATAAAAAAATAATTAATATTCATTGGATATTTTAAAAGTCTAATGATAATATGAAAAAAAAGAAAAAACATAAAGTAGGTAAAAAAATAGGAGAAAGTAAAAAGAAAAGTGAAAAAATAATATCCATGATGTTATGAGTAGTAATTATTTTTGTAGTACATTTAGTAGTATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTAACCTACCTATGAGGTATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.30,-3.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 25120-27455 **** Predicted by CRISPRDetect 2.4 *** >NZ_LNGH01000007.1 Marinitoga sp. 38H-ov contig_15, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 25120 30 100.0 37 .............................. AAATTTTGATGTTGCTTCATATTTATTTGTTAAATTA 25187 30 100.0 39 .............................. CAAAAATTTCAAAAGCTTCATTCTTTAATTTTAAAATAA 25256 30 100.0 37 .............................. ACTTACCTCTTACTTTACCTTTTTCTACTTTAAAATT 25323 30 100.0 37 .............................. GAAGATGTATCTTCCTGTTTTGTGATGGGTATAAAGC 25390 30 100.0 39 .............................. CCCCTATTATAAAATTCATATCGTTTCTGGAGTTTTCAT 25459 30 100.0 38 .............................. TTTTTCAAGATGACTTCTTTTACGAAGTCCCTATTTGG 25527 30 100.0 37 .............................. AGGTAGCACCCCTCCAATCTCGGGGTGATCCTATATA 25594 30 100.0 37 .............................. ATCAGTAGGCGACCCTATGTAGTAACCTGTGATTCTA 25661 30 100.0 37 .............................. TTGCAAAAGTATTCATTTTGTTTTTCTTGCTTTTAAA 25728 30 100.0 37 .............................. AAAGTACGACTTGGGTTTTCTAAATCCTCCTGCTCTA 25795 30 100.0 40 .............................. TCCAATATTTCATTGTAGACATTCCAAGACGCTATTTTTT 25865 30 100.0 40 .............................. GAAATTTTTAAAGTTCAAATTTTCACAATCATTTTTACAG 25935 30 100.0 36 .............................. TTTAAGCTTACATTCCACATAATTTCACCTCCCCGG 26001 30 100.0 36 .............................. TATATAGGCATCTTCAACTGCTTTGCAACTATCAAG 26067 30 100.0 39 .............................. CAAATGATTCCAACGATGGTTCTTCTATCGTTTTTTTAA 26136 30 100.0 40 .............................. CATATTTTTCTGGATATTTTCCATAATGTTTGTAATACTC 26206 30 100.0 37 .............................. AGGCCAGGTAGCACCCCTCCAATCACGGGGTGATCCG 26273 30 100.0 41 .............................. AACCAAAAGGGTAGCAAATGTTTCCAACGATGGTGTTTTAA 26344 30 100.0 38 .............................. TATTACTAATTCATCAGCTATTCCGAAAAGTATTTTTG 26412 30 100.0 36 .............................. AAATTTAGCCTACAATTTAGCAGAATTAGAAAAAAT 26478 30 100.0 40 .............................. ACGGCTGTTGAACAGCCGCCTTGATGGCGGCTTCTACAGG 26548 30 100.0 35 .............................. AAGTAAGCCACCCACCTTTATAATCAAGGATTTTC 26613 30 100.0 37 .............................. TTGGCATATTCTAGAAGAGCTTTTTTTGCTGATGAAA 26680 30 100.0 35 .............................. TCTTATTTCGGTTCTAAAACCATTACTTGTAAAAC 26745 30 100.0 38 .............................. TCTATTTATATCTTCCCAGTTAATGTTTGCATATATTA 26813 30 100.0 41 .............................. AAATAAAAGCAGGCCCTACAAGACCCGCTGAAATAAAAAAG 26884 30 100.0 37 .............................. CCATGGCCAGCATGCCTGCAAAACTACCCAAGATAAA 26951 30 100.0 38 .............................. GTGGTGTTTGTAAACCACCCACAGTTCCTTACAAATAG 27019 30 100.0 39 .............................. TAATAGTTCACCGTCTAATTCGCCCTTATTGTCAATTAA 27088 30 100.0 41 .............................. TAATCATTATACAAGAACACTAACCCATTTGCTAATTTCAA 27159 30 100.0 38 .............................. AGATAAAAAAAAGACGGCACTAAGCCGTCTTAGAATAT 27227 30 100.0 36 .............................. AGTATTTCGAATCGTTTATAACTCTTACTATATTTT 27293 30 100.0 36 .............................. TTCTATGTTATTTACTTCATCAAATACTTTAACAAT 27359 30 96.7 36 .............................T AAAGTAGAGATATTTAATTCAGAAAAGATGAAGAGA 27425 30 73.3 0 .....A......T....A.A....AA.G.T | C [27427] ========== ====== ====== ====== ============================== ========================================= ================== 35 30 99.1 38 GTTTTTAACCTACCTATGAGGTATGGAAAC # Left flank : GAGAGCTAGAAGGTATTCTAAAAAATGCAGTAAATTTGGCTTCTTCTGAAAATTTAAATATAATATTAGAAAAACATATAGTTTATTAAAAAAATCGGCTCCTATTAAATAGGAGCTGATTTATTATAAAACACAAAATATATTTGTAAAATTTTTACTTAAATGCGTTTTAAAAAACATAATTTTATATATTTAATAATTATTTATCTATTAAATAATAAAAAAGAAATATTGTTAAATAAAATAAAGTTTGATATACGAATTACAGTGTGAGATCCGGGGAAATAAAAATCGTCTAAAAATATTATTATTAATGAATCACAATTTTGTAACCATGTAACGTTTAGGTTAATTCATAAAAAATGAGGAAAAATAGGGGGGATCCGGAAAGCGAATAAAGTTCTAAAAATATAATTGTTGAGCAATTTTACATTAGGTAAACTGCACGATAAAGGAAATGAAAAGAAAAGGTGTTATAATAATAATCAGTATTTCTACGT # Right flank : TAATAATAAAAAGTAATGCTGAAAAATTATTGGAAGTTTATGTATAATTTAAAAAGAAATTATCAGTAAATAGAAGTGAATATTGCAGAATATTTGTGTATCATTGTATCTAAAATAAGATGAAATGTTATATGAATTAATCAATCTTAATGAAGACTAATTAAAAATTTAGATAAACTATAAAGTATAGAATAAGTATTTTATAATAAAAATAAAACATATTATTTTTTGAATAAAATTAGTTTTGTCTATAATCAAATTGTTATATGAATTAATGTTAGTAAAAAAATAACATAGCAGCTATTGCCGCTATGTTATTTTTATAATAGATAAAATTAATTATAATAAATGCGATTAATTATAATATTCAACAATAGTTTCAACATTATCAGTAATAATAGCATCAAGATATCCATCTAAACTTTTTAAAGTTTCAATATCATTTAATGTCCATATTACTATATGAAGTCCTAATTCCATTAATTTAGAAATTAAATTCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTAACCTACCTATGAGGTATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.30,-3.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //