Array 1 6100-5340 **** Predicted by CRISPRDetect 2.4 *** >NZ_SCYN01000321.1 Pseudomonas aeruginosa strain 107 scaffold_320, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 6099 29 100.0 32 ............................. GCTGGAGCCGCCGGCAAGACGTTCGGCGAGGC 6038 29 100.0 32 ............................. GACGGCGACCTGAAGCGCGCGGATGCGATGAA 5977 29 100.0 32 ............................. ACGTTCTTGTGCTTCTTGCCGGTCAAATCCGC 5916 29 100.0 32 ............................. GCCGGCCAGGTGCTCGGCCAACAGCTCGCGAA 5855 29 100.0 32 ............................. GCGATCATCGAATGGCCGCACCGCATGGACCT 5794 29 100.0 32 ............................. CTCAACGAGAAGAACATCCCGCGCAACATGAT 5733 29 100.0 32 ............................. GCCATCAAGGAAGAGCCCCAGCTGCGCGTCGA 5672 29 100.0 32 ............................. CTCGCGGACAACACCCCGAACCCCTACGTCGG 5611 29 100.0 32 ............................. CTGCGCGTTCACGCCGAAACCCTTGGCTGGGT 5550 29 100.0 32 ............................. TAGTCCTGGCGGATATCGCTGCACCAGTGCAT 5489 29 100.0 32 ............................. ATGGAAGACCCAACCCGCGGCCAGGGGTGGGG 5428 29 89.7 32 ..............C..........G.T. GTATCGACATCGATGGTGACCAGGCTGGTCCA 5367 28 79.3 0 A..........A..C.....-..A....T | ========== ====== ====== ====== ============================= ================================ ================== 13 29 97.6 32 GTGTTCCCCACGGGTGTGGGGATGAACCG # Left flank : GGCATCGTTGTACAGGGCGACGAATTCCGCGCCCCAGAACAGCACGATCTGCGCCTTGGCCGGCAGCAGCGTGGCCATCGTTGTCTTCAGGCTCGCCGACCAGGCGTCCGGCGGGCCGAGGGGCGAACTGGCCGCGTCGAGGCTGAGCAACAGTTTCCCGACCGCTCCTCCGTTGGCCAGGAAGGCCGGTGGATGGTCGAGGGTGTTCGGGTCCGGTTCGATGGTGAAAGGCTGTGCCATGTCTGCGGAGTCTTGCTCGGTTCCGGTTGYGGTGGTGGGTCGTATGGAATATAGGAGGGCGGTGGGTGCGCTTGCGTTCAATCAGCTTGGGGGACCGCGGGATCCCGATGCGGGTAGGTTTCGACTGGTCCCGAGGGAGCTGCCGGATTAGGCTGTGGGATGAGTACGGCCCTCATTTCCAGGAGCGGCGCGAGGGCCGCTTGGCCCGGTGGAATTTTGCTGTTGTTTTTCTTTTTTTAAAACAATGGGATACGGTAAGG # Right flank : GTCTACGCTCCTGCGGTTCGCCCCACCGCGCGGTATTTCCCACGGTGGGGCGAACCGCGCGGCACTACGACCAGTGGCGTGATCACCAGTGTCAGCCGCCAGTTGCGGAGACGCGGATCGCCCACCGTCCGGCAAGATCCTCTTTCAGGGCATGGAGTTTCCAACCAACCTGGTTCACGTCGCTGGGGATGCAGGCTTCGCTCAGCACGAATAACTGACGGCGCAGGCATTGGGCGGGGGCTGCCTGGATACCTTGCCCTTACCGGTCTCGAAGAAGGCTTCCAGCCCCCTGTGGCGGAAGGAAATAGATTGTGAACAGGCGGCAAGTGAAGGTTGTTAGAGAGTTAGCGGAATGTCCGACGTTCGCTGTTGCACCATGGAGTTCCTGCTAATTTGGACAGGGTGGTCGGTCCGGTCCATATCCCTCCTGCGCTCCTTCGCTTGCTAAACGGGGGTGAACAGGCGCATCCCTCGCTGGCTGCTCCTTCTCTGGGCCAAGA # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGGGTGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGGGTGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 7634-6406 **** Predicted by CRISPRDetect 2.4 *** >NZ_SCYN01000314.1 Pseudomonas aeruginosa strain 107 scaffold_313, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 7633 28 100.0 32 ............................ TGCAGGGTGGCGGAACCGGCTGCTTTGCCGCC 7573 28 100.0 32 ............................ AACTCAAAATTGCCCAATCAAACCGCGGGATA 7513 28 100.0 32 ............................ GCGTGCAGCAGATAGCCCTCAAGGAAGCTCAA 7453 28 100.0 32 ............................ AGCAACACCAGCAGCAACGATTACAAGTGGTT 7393 28 100.0 32 ............................ TATAAGCATGGGTCTGATGTAGTTGTTCGAAC 7333 28 100.0 32 ............................ AGCCATTTCGGCGAAGGGACTGAAGAGGGCCT 7273 28 100.0 32 ............................ TTTGGTGAGGCTTGCGCTCCCTGGGTGTTCGA 7213 28 100.0 32 ............................ CAGGAACGTTTGCTCGCGCTTTGATCTCAAGC 7153 28 100.0 32 ............................ AAGATGGTCGACGTGCTGATCCTGGCAATGCG 7093 28 100.0 32 ............................ GTTCCATATCCAACACCGGGACGGGAGTCCGA 7033 28 100.0 32 ............................ ATCCTGATATCCGGCGCTGCTTTGCCGACTAT 6973 28 100.0 32 ............................ TCCCGAGGAAACGCCATGCACACCCTCAACCT 6913 28 96.4 32 .................T.......... TTGCCGGTGGCCGTTTCGACGATGTGGAAGAA 6853 28 100.0 32 ............................ TCTACGAGCAGACCGAGTTGAAAGGACAGGAG 6793 28 100.0 32 ............................ TGGACGYACCGCAGCAGCGGTACGACGTTGTT 6733 28 100.0 32 ............................ TTGCGGATCCGGCGGTAGACGACCATCCGCAC 6673 28 100.0 32 ............................ TGCAGGTCATAGGCGTATTCGAAGGACAGGCT 6613 28 100.0 32 ............................ TGGTTCCGGCTCAAGCAGCGCAAGGAACTGAG 6553 28 100.0 32 ............................ TCGACATGGCGACGGCTCTTGAACGGTTCTAT 6493 28 96.4 32 ........................A... TGTCCCGAAGTTCATAAGCGGGCTTAGGGCGA 6433 28 75.0 0 T.........AC.....TC.TC...... | ========== ====== ====== ====== ============================ ================================ ================== 21 28 98.5 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : CGAAGTCGTCGAGGACGAACCAGGCCTGGTCGTCGATCAGCAGCGCGCGCAGCAATCGCTGCTGTCGGAAGAAGTAGTGCGGGGCAAGCTGGGTATGGCCGTGCATAGGAGAAATCCTTCTCTGAGCTGTCCGCTGCCTGGCTTCTGCCGGCGCGGCAGGGAGACAGGCCGCTCGTGGGTGTTGGGCCAGCAGGCTGTGGCCTGCCGGGAACCGAAGTCGCCGGCGAAAAAAGCCTACTGACAGCGCCTGTAGGACGGCAATGGCTAAGCCTTGTACGAAGTCTCCGATGGCACAAGCCCGCTGAACAGCTAGGCCGTTCTGAACATTACGCCGGCATGGAGAAAACAGGGGATGGACGCTATGCTTGGGAACCCTTTTTTTGGTGGTTTTTTAAAGCCCTTTTAGATCAAAGGGTTAGAGATCGTTGCAAAAAGAGGGTTTTTCCGGGCTTTGGCGCTGGAGCCCTTGGAGCTTGGAAGGTTGATGGTTTTTTGGTCTA # Right flank : CGGCCAGCAGCCCTGAAGTATCGATTGATGCGGTTCGCTGTCGGCCGGGGTCACCAGTCGAAATGAAGTCCCTTTCCATGGGACTTCGTTGCGGACATGCCGATGAGGCGCTGACGGGGTTCTTCAGAACCAGGGAACGAAACCTCCTTTGCTCAACCCGTAACAGGTGAATCCTCCTTCCTCTGCCGTCGCCTGCAACGGCCCGTGGCGGATGAAGAGACGGAAGTGCTGTCCGGTGCTCTGGCTGCGTAGCGTGACGAAGGGCAGGTCCAAGGTTCTCGCGACCGTATCGGGAATGCGTTTCCGAGCCTCCTCCTCACTCAGATCGTGCCGGCGCATGAGCCGCCGACGCAGACGTTCCGGATTGCTTTTCGCCTGAACCCGACTGACCTGACGGTACGGTGTGGGGTGAGGCACGACTGCCGCTTCTCCGAATTGCAGATGGTCCCGCAACCCTTCCAGCCAGGMCCGGGCGAGCAGGGCATGAAGGTCGTCCGCCG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 869-47 **** Predicted by CRISPRDetect 2.4 *** >NZ_SCYN01000447.1 Pseudomonas aeruginosa strain 107 scaffold_446, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 868 29 100.0 32 ............................. ACCCGGCGAAACCCTGCATATCGGCGACAACA 807 29 100.0 32 ............................. GATCGCCTCGTTCTCCGACCCGACGCCTTCCA 746 29 100.0 32 ............................. TCGACCTTGTCGACCCAGGCGACCGCCTTGAG 685 29 100.0 32 ............................. CCCATATGTCGCAATGTTCTATACCAACAGAA 624 29 100.0 32 ............................. GCGCAGCTCGATCCTGAGCAGGTCGATGCGTA 563 29 100.0 32 ............................. TCCTCCACCCGCTGGGTGATTTCCTCGGTACG 502 29 100.0 32 ............................. CGGGATAACAGTGGGAATCAGTCTGTAGGCTT 441 29 100.0 32 ............................. TCGTAGCGCGGACTGATGTCGTTGCAGTACTT 380 29 100.0 32 ............................. GTCTCCCACGGCGATCCGCGGTAGATCATGTT 319 29 100.0 32 ............................. CCGGGAATGAACGTTCCCATGTCGGCTACGCC 258 29 100.0 32 ............................. GTCGCCAGGCCCACGTCGGCGGATCACCAACA 197 29 100.0 32 ............................. ATGTGCTTCCAGCTTTCGTCGTCCAGCTTCCG 136 29 100.0 32 ............................. ATAAAAGAGGCCGTCAAATACCGATGCGTCCT 75 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 14 29 100.0 32 GTGTTCCCCACATGCGTGGGGATGAACCG # Left flank : CCTCGACTGTCGGCACCTTGCTGGTGTGGGTCGGTGAGGCCGGCGGCGTCGAACCTCCCAGCGCACCGCCCGAGTCGGTGCCGTCAGCCATTCCCAACCCGGAGGGAATCGGCGACCTCGGGCACAGGACGCAAGGGTGAGCTTCCTGGCCGTAGTGGTGGAAAACGTCCCGCCGCGCTTGCGCGGACGTCTGGCAATCTGGCTGCTGGAAGTCCGCGCGGGCGTCTATATCGGCGATGTATCGCGGCGTACCCGGGAAATGATCTGGCAGCAGCTGAGCGAGGGCTACGAGGAGGGCAACGTGGTAATGGCCTGGGCCGCCGCCAACGAATCCGGCTACGAGTTCCAGACCCTGGGCGTTAACCGTCGACATCCAGTGTTGTTCGACGGGCTGCAATTGGTGGCATTCCAGCCTCTGGATCGGACCACGGAATAGAGGATGAGGCGGTAGATTTTTCGAGGTGTTTTTTCTTCTTTAAAAACAATTCTGTACGGTAAGT # Right flank : GCAGCGGGCCACCTGGCTGCAGTTGCTGACCAGGTGTTCCCCACATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACATGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACATGCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [26.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 424-1593 **** Predicted by CRISPRDetect 2.4 *** >NZ_SCYN01000586.1 Pseudomonas aeruginosa strain 107 scaffold_585, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 424 28 100.0 32 ............................ TACATGATAGGAAACACTGTCACCCTGGTGGT 484 28 100.0 32 ............................ ACTTACGCGATGGGGCTGGATGATTGGGGCGC 544 28 100.0 33 ............................ CCGACGATGCGGTCGTGCTGGGCGACGGTCATC 605 28 100.0 32 ............................ TTGAAGTAGTCATAACGGTCATAGTGCTTAGA 665 28 100.0 32 ............................ TTATTGGTCGTGGTCGCAGGGAAGGCACTCCC 725 28 100.0 32 ............................ AGTTCCTCTATGGTTCCGGTCCGGTCGCGCAC 785 28 100.0 32 ............................ AGGGCTCCATGGACGGAATGAGTCGGCCCTCC 845 28 100.0 32 ............................ TCCAGGTGCTGGCAAACGTCAGCCCCTTTGCA 905 28 100.0 32 ............................ TGGAAACACCGAGCGCTGACGCCGATCTCGGG 965 28 100.0 32 ............................ TTCGAGTCGTAGCGTCGTCACGGCCGTCGATG 1025 28 100.0 32 ............................ TGGTCGATATTCACGACCGGAGACCGGTGGTG 1085 28 100.0 32 ............................ ATCTTGCGCAGGGCGTAGACGCATACCAACCA 1145 28 100.0 32 ............................ AAGTGCAAGAGAAGTGTGCGATTAGCGCCGGA 1205 28 100.0 32 ............................ CACCGGTCCCACCGTCACCGCCACCCGTTCCG 1265 28 100.0 32 ............................ ATGTAGTAGCGGTAGCCCATCGTTTGCGCTTT 1325 28 100.0 32 ............................ TACGTGCGGTTCTGCGCCGCGCCGGATGACGA 1385 28 100.0 33 ............................ CTGTAAGGTTCGACCCATCCCCTCTGGCCCGGA 1446 28 100.0 32 ............................ TTGCAGTTCGGGTCTTTCGGGSCTGGCATGTC 1506 28 100.0 32 ............................ AGTCCGCCCAGGTGCTCGAGTACCGTGTCGAC 1566 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 20 28 100.0 32 GTTCACTGCCGTGTAGGCAGCTAAGAAA # Left flank : CGCTTGAGGTCGGCGATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCTACCCGAGCCTGTAGCGCCGCTCCCCGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGTGGCATCGCCCATCACAGGACCTTTCGCGCCCGAACGGCACGCTTGATCGCCGTCCCGGTCCTCGCGAAACGGCCGCCAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCGGGAAAAACTCGGTATTTCTTTTTCCTTCAAATGGTTATAGGTTTTCGGAGCTAG # Right flank : ACTCGAACCCACCTCGGCCACAACAGCCGCCGGGGTCGCTGCCGTCTAGGCAGAACCACCCTCTCCATCCCACTACCAAACATCCGAATATAAAGTTCCTACCCCGCCCGCCAGCCTCGCCCGTCCACGACAATGTGCCCCGCTTGGAAGCTCACGCTCCTCATACAGACGAAAACGGGGTAGCGGCAATCGGCCATATCCGCTAAACAGTTGCCTTGGCGCAGAATTCGATAGATCCGATAGGGACAGGCCACGGTCAACATGGACGACATTTCTCCCAGCGAACTGAAGACGATCCTTCACTCCAAGCGTGCCAACCTGTACTACCTGCAACACTGCCGGGTACTGGTCAACGGCGGGCGGGTTGAGTACGTCACCGACGAAGGCCGGCATTCGCACTACTGGAACATCCCCATCGCCAACACCACCAGCCTGTTGCTGGGCACGGGTACCTCCATTACCCAGGCAGCCATGCGCGAACTGGCCAGGGCCGGGGTATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTGTAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [60.0-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 513-362 **** Predicted by CRISPRDetect 2.4 *** >NZ_SCYN01001774.1 Pseudomonas aeruginosa strain 107 scaffold_1773, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 512 29 100.0 32 ............................. GTGATGGAGCGGACCGCCCCGAGCACCGCAGA 451 29 96.6 32 ........T.................... AAGGACCGCGTCCGCGTGCTGCTGGAGACGAT 390 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 98.9 32 GTGTTCCCCACATGCGTGGGGATGAACCG # Left flank : GGGCCACCTGGCTGCAGTTGCTGACCA # Right flank : GTGGAAGTACGCTCGCGCAGCGAGGATGCGATATATGCACGGGGCGAGCCGTTCACTTGAAAAGCCGACATTCCTGGCTGTCCTGTATTTCCCCTTTGGCATGGATAGAGCAGCCCCATAGGGCGAACGACGCCACCGGCGTCATTCGCCATGGCCGGGTCAACCGGAACGTCGAGCGGCTACCAGGCGCTGCTGCAGGCMCGTCAGGAAGGCCACTTCGAAGGCGGTCTTCTGCATCGGTGTGGGCAGGCTGTCGCGGCCGAAGGCGAAGGCGGTCCAGAGCTGGCCTTCGATCTGGTCGGCAAGCCAGTTCTCGGCCTGGCGGACGCCCTTGTCGACGGCGGCATGGGCGGGAACCGGCG # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACATGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACATGCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [41.7-15.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.05,4.87 Confidence: MEDIUM] # Array family : I-E [Matched known repeat from this family], //