Array 1 228741-228377 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCMH010000001.1 Coprococcus eutactus strain DFI.5.16 MGOMLKCE_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 228740 36 100.0 29 .................................... TTGATTTGCCATATAGATTTGGACTATAA 228675 36 100.0 30 .................................... TATGCAAGTTATGGCTACAGCACCACAAGT 228609 36 100.0 30 .................................... GCAGTACGAAAAAATAACATACTCAGGTGA 228543 36 100.0 29 .................................... AACTGTTAGATGGCGATGTGTTCAGTGAA 228478 36 100.0 30 .................................... CGGAAAGAGCACCGATATTGCTTGAGTTGA 228412 36 97.2 0 ....................T............... | ========== ====== ====== ====== ==================================== ============================== ================== 6 36 99.5 30 GTCATATTTCCCTTTTTATTCTTGGTATGTTATAAT # Left flank : CACATATGCTTCCTGCATAGGTGTATCGTACTCATCGAGCAGCAATATAACCTTTTTACCATAAAAGCATCCCATATATTCAGTTATTCGAACAAATCCGCACGTCCGGCATATTTGTTTGAAAAGAAACACTCCAACATGTTCATGTTGAGCGTCTTGCCAAAACGTCGTGGACGTGTGATGAGTGTAACCTCGTCCCCGGACTCCCACCAGTCTTTTATGAATCTGGTTTTATCTATATAGAAGTAATTGTTTTTTCTTATTCTCTCAAAGCCTTGATTTCCGATACTTACTGTTCTTGCCATGTAATCACCACTCATTTTCGATTGAACACCAGCCATCCTGAGTGCAAACATAATCATTTTTATTTTAACACAGAGTATGTCGGGGCACAATGGAGGATGTGGCGAGAGGGATACGCAAATAGACACGTTTTTCCACATGTTTTTTTATTCTTGGTATGTTATAATGGGTATAATTTATAACATCGTGCTTTACGT # Right flank : AGGGTAGCAAAAAAGCTAGGATTTTCAACAAATCCTAGCTTTTTCACATTAAAAAATCATATGATATCCAGCAAATTTATGCTACCTTTTTCTTCTTTTTTTGTTGTTCCCACCAGTATTTTCATCGAAGAATACTGTTTATCCGTGAGAACCAACATTCTTACAGAACCCGTTTCTGGAAGATTTTCATTCAGACGCCCTTCATGTTTTCTTACCGCATCCATCCCATTGCACACACGAACATATACCGAATATTGCAACATACAATATCCATCATTCAACAGAAATTTGCGGAAACTGTATGCGCATCTTCTATCCTTCTTCGTCTTTGTTGGAATATCAAAAAATACAATCAATCTCATAAATTAACTCATAATTATGTCTTTCCAGCTCTATCAATTCTGGGATTTCAAGTTCATCCTTATTACCCATCAAAATAGAATTATAACTTGCTACCATTTTATCTATGGCATGATGTATTACATGTTTTTCTCCATGTA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCATATTTCCCTTTTTATTCTTGGTATGTTATAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 586106-587245 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCMH010000002.1 Coprococcus eutactus strain DFI.5.16 MGOMLKCE_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 586106 30 96.7 35 .....T........................ CTTGTTTCAGGTTCTTCATGGCAGGGCTTTCCCGC 586171 30 100.0 36 .............................. GAATGTGAACGCCGAGGACGACAGGGCGAATAACTA 586237 30 100.0 34 .............................. CAGCAATAATGGACGATGTAGACTATGGTGTATC 586301 30 96.7 34 .........A.................... TGACTATTCCTGAACGGAGTCCATCCTTACCCTT 586365 30 100.0 35 .............................. CCAATTTCAGGTACTCTTCTATATGCTTCTCTGTG 586430 30 96.7 37 ............A................. AATAATTATCAACTGCTTCCCATACCATATTACTCAC 586497 30 100.0 35 .............................. GCTACAAGCATGTCGGGACGGCATATGGTGTTTTA 586562 30 100.0 35 .............................. GACTTTGCTTCTGTGAAAAGTTTAGCGATGACTTT 586627 30 100.0 34 .............................. GTTTGGAGAGGAATATGAAAGTAATATACATATA 586691 30 100.0 36 .............................. CATAAAGATTTTAGTCTTGTTAAAGAACTAGGGCAA 586757 30 100.0 35 .............................. CAGAGGCCACAGCGGAAACAGCACAGAATAACAGT 586822 30 100.0 37 .............................. TACAGGCGCAGTTTATAGAGAAAAGTCTGATAAGAAC 586889 30 100.0 35 .............................. GTTATCGTGATTTTTGATAACGCTCTCTGTACATC 586954 30 100.0 35 .............................. CGGAGGAACACCTGACATGCGATATAAGTTTTTGT 587019 30 100.0 36 .............................. AGAAATTGCCGTTTTTGTTTTGCCGTCTTTAGCGAC 587085 30 100.0 35 .............................. AAACGCAAACAAGTTAATCAGACGACACATACCAA 587150 30 100.0 35 .............................. AGTGTCCCGATTTTGACACGCTAGTTAGTCCATAT 587215 30 76.7 0 ................CCT......CTG.T | G [587239] ========== ====== ====== ====== ============================== ===================================== ================== 18 30 98.2 35 ATTTACATTCCACTATGTATCTATTAAATC # Left flank : CTTGCACTCTTGCCCAAAACGCTTTATCCCATTTACTTTGTAATTCGGGATGTCTGTCATAGATTATCAATGTACTATTTCTATTTAAGTCCCCCATAAAATTTGAAATACTTATTTTGGGTGGAATTGCTACACTGAGATGTACATGATCTTCACAAACTGCTCCAGCTATTATTTCAACGTTTTTATATTGACATAAAGTATTGATTATTTCTCTTACATCTATTCTAATTCTGCCATACAATACTTTTTTCCTATATTTTGGAATAAAACTATATGGTATTAGCATTTTCATCGTGTATGTGATAAGATTTTATTGTCCATTTGGACCACCTCCTATGCTTGAGTTTGGCTTGCGACACCATTCTCAATATAGCATAGGAGGTTTTTTATTGTAATACTCATCGTTTCCAATTACCCTATTCTCCCCAGCATAGCTGGGGGATTAGGGTTTTTCATTAAATCCATGGCACACACCACAGGATTATTTATAGTTACCA # Right flank : TTATATATCTTGAATGGAGAAGATCACAGCACATTCCGCTTCCTATGATATCCATATATAATTTCTGTGCTTTTGTAACTGTATTACAAATTACAAGAACCTTTTTCTGCTGCCCCTCTTCAACGATCTTATCAATGTCTAAATCTCCATTCACCATCTTTATACGATGTCTGTCATTCCTAGCACATGCCGAGAAATCCTGATATACATAATCCCTGTCTTCCAATAAGCCATGTCCTTTCATAAAATGCGACATAACCGGTGGAAATGTAGCCGTTATAATTGCAAATTTTCCGCCCATCATGTTTATCTCTTTAAGTCCGTATATCAGTGCCGCAACTATCTTGGGTGAATACGCCTGTATCTCATCGATTATGAGTTTTGAATACTTCAATGTTGCCGCAAATACTTCTGTGCCAGGGAATTTATACACAAATTTCAATAGCTGATCAACAGTACACACTGTAAGAGGATATGCAAGTAGTTTTGCTCTCTCATAC # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTACATTCCACTATGTATCTATTAAATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [3-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //