Array 1 14470-11917 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADPET010000025.1 Clostridium sp. 1001270J_160509_D11 NODE_25_length_24337_cov_29.7638, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 14469 37 100.0 36 ..................................... TTGCTAATTTATCTATGGTGCTACATAAATTATCTA 14396 37 100.0 37 ..................................... GTTTTTTATCTCCATCTATATATTCATCGATTGATTT 14322 37 100.0 37 ..................................... TAAAATTTTTTTTCATATATGAAATTTTTGCTATTGA 14248 37 100.0 37 ..................................... AAGTCCCCTTGGAGGAATATATGTCTATACCGTTTTT 14174 37 100.0 40 ..................................... GTTCTATTAAGTTTCCTATCGCACTTGCTAGAGAGCCTAA 14097 37 100.0 39 ..................................... ACGAAGAACCAGGTGCTCAAACTGATACAACTTGTTATA 14021 37 100.0 37 ..................................... CATAACGCATTATATCACTATAATATCCAAGTGCTAA 13947 37 100.0 37 ..................................... TGGGTATTTGGCAATAAATTTACACAATTTAAAGGAA 13873 37 100.0 36 ..................................... TTCATTGTAATAAAAATAAAAAATTTATGTATTGTT 13800 37 100.0 36 ..................................... TTTTCCTCCTTCTGATAGTTCTGTTATCCTATGATG 13727 37 100.0 37 ..................................... CTTTTAAGTTTGACCTTTGTGTAATTGTTTTATAATC 13653 37 100.0 36 ..................................... ATTTTTTATTTGATAAGCAACTATATACATCACCTA 13580 37 100.0 38 ..................................... GTTATAACCACCTCATATTGTTTTAAAGCTCCTATTCT 13505 37 100.0 37 ..................................... GCCTTTGGCAGTTCCTCATACACTGCCTCCTTGTAGT 13431 37 100.0 35 ..................................... ACTAAAATAGGTACAAATACTCTTGTAATTATGAG 13359 37 100.0 36 ..................................... ACGTAAACATTATCTTCCTCCTATTTTTTCAAAATA 13286 37 100.0 35 ..................................... ACATAGCTAATTCAGTTTTTGTTATTTCTAAATCA 13214 37 100.0 37 ..................................... AAGGGATATATGGAGATAAAATAAGAAATTCAAACGT 13140 37 100.0 38 ..................................... AATATAAGTTTATATACTCCAGCTTCTTTTAAGAAATT 13065 37 100.0 37 ..................................... AAACAGGAAAATGTAAATTGAAAAAGAATGTATCTAA 12991 37 100.0 37 ..................................... ATTCTTACTCCATTTTCACAAATTGTTGCCTCAATTA 12917 37 100.0 37 ..................................... GCATATAATGCTTGTGCAACCATCCATATACCTCTTA 12843 37 100.0 38 ..................................... AATGATAGCAAGTGATGGGGAAGATGAGTCTAGTATAG 12768 37 100.0 36 ..................................... ATGGAAAAACTCCTTGCCAACAGTTTTCTATTGAGT 12695 37 100.0 38 ..................................... CAGATAGTCCAACTCTTAGGGAAACCTAAGTTCTAGGA 12620 37 100.0 36 ..................................... ATATCATGTTTTCCTCCTAAACAGCACTTGCTTTTT 12547 37 100.0 36 ..................................... GAATTATATAGTAAAACAGGAGATGCTAACAATTAT 12474 37 100.0 36 ..................................... TATGTAAGAAAATAAAAAGAAATATAAGGACCTTAA 12401 37 100.0 39 ..................................... ATAAAGCATTAAATGCTCCTATTGATAACATATGAACTT 12325 37 100.0 37 ..................................... TTCATTTCTAATAATTGATTTTTTATATTTTTCATAA 12251 37 100.0 37 ..................................... TCTTGATACAATAGTAGCACGACACATATTTATTTGT 12177 37 100.0 36 ..................................... TATATTCTCATTATCTGCTTTTCTTGTGTTTTCGTA 12104 37 100.0 37 ..................................... CTTGAAAATCATGTAATGTAAACATTATATTATATTT 12030 37 100.0 38 ..................................... TTAATGTTATCTCGTCAGTTTTGAATTTACGTATACTT 11955 37 94.6 0 .................................T..T | AA [11923] ========== ====== ====== ====== ===================================== ======================================== ================== 35 37 99.8 37 GTAATAGAGTAAGTTCCAATAAAACAAGGATTAAAAC # Left flank : TGACTCCTTGGTTGGCATTAAATCAAAATAATATAAAAAAATATAATCAAGCAGATATAATAGAAAAAGACAAGATATTACAAAAAATCCTTATAGGAAATATATTATCTTTTTCAAAAGGGATGGGATATACAGTTGACGAAATTATAAAAGTAAAGTTAAACCTAAAGCAAAGAGATGTAAAATTTAAAGGAAATGATATGAAAGGATTTGTGGGAGAATTTTATACTAATTTTCAAATACCAGATAACTTTGCCCTTGGAAAGAGTATTTCTAGAGGATTTGGTACAATAAAAAGCATAGTTTGATTAAATTGTTCCTAACAAATTATTTGAAAAATAGGAGTTTGATCTATAGAAATATTGAAATTACTGGATTAGAGGAGTATGTTGATAGATGAAAATAAGGGTGTTTTTGTTGAAAATATCAGTGTTTAAAAAAATATATATTTTTTTGAATGTCTTGAAATACAGTGATTTCAATGGGTTTAATGTGTACGA # Right flank : TACTCATACAACACTCAAAAAAAATAAATTGTCAAATTTAAAAGGAATTTAAAACCTATTAGCAGAAATCATAATTAAGTAAATTAAAAAAGGTGGTGAGGTTATGAAGTTGGTTGTTAATTCAGAAGGGGTATACCTGACTAAAGTAGGTGAATGTTTTTGTTTAAAAAAGGAAGGTCAAAAGCAAGAAATAGCAGCTAAAAAAGTCGATCAAATCATAATAACTACATCTACAGCATTATCTACTGATGCTATTGAACTTGCTGTTGAAAATAATATAGATATAGTATTTTTAAAAAAGTATGGAAAACCATTTGGTAGGGTATGGCACTCTAAAGTGGGGAGTATAAGCACGATTAGAAAAAGACAGTTAAATCTAGATTCAAATAAAATGGGAACTATCTTAGTAAAAGAGTTTTTGATTCAGAAAATGAAGAACCAAGCAGATTTTTTAACTGAATTATCAACAAATAGAAGAGATAGCCGAAAGATTGATATTA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAATAGAGTAAGTTCCAATAAAACAAGGATTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 2 24088-21066 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADPET010000025.1 Clostridium sp. 1001270J_160509_D11 NODE_25_length_24337_cov_29.7638, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================================== ================== 24087 37 100.0 37 ..................................... AATTTTGTATTTTAAATATCGTCTTTTGTCTATCTTG 24013 37 100.0 37 ..................................... ATCTTGGATATTTCTCTATACTTGGTGGAATTATATA 23939 37 100.0 38 ..................................... GTTTTTTAAGCCTTGTAAATTCACTTTCTAATGGATTT 23864 37 100.0 40 ..................................... TTTTTTCTCAAGTTTCCAAAAAATTTTTTGTAGGATTTTT 23787 37 100.0 37 ..................................... TTTTCTATTTCTTCTGGAATACCTACCATTGCACACA 23713 37 100.0 37 ..................................... TCCATAAAGGAATATTTGTAGCAAAATAATTCCATGT 23639 37 100.0 37 ..................................... GTAATCTTCTAGATCTACTGTTACTTCTGTATCCCCT 23565 37 100.0 35 ..................................... AGTAATAGAGTAGATAAACACAATAATCTAGTTGA 23493 37 100.0 37 ..................................... ATAAATATACTGAAAGAGTACCTAACTTAAGAAAAAG 23419 37 100.0 36 ..................................... TCAATGGAAAGACTTCTCATAATCTCGTTAAAAAGA 23346 37 100.0 37 ..................................... AAACATTAGCAGATAGTAATGCCGATTTTATAGCTTA 23272 37 100.0 37 ..................................... TCAACTCCTCTATTATTTTATCTAATTTTTCATTGAA 23198 37 100.0 38 ..................................... TTTTCTTTTGGTCCTCTAATATCACTTTTCTTAAACTT 23123 37 100.0 38 ..................................... ATAGCTTTATAAACTATATTCATGCTACTATTATCAGT 23048 37 100.0 38 ..................................... ACTAGATCTAAAGTCCTCATATATTGCACTTGTGTTTG 22973 37 100.0 36 ..................................... GTTCTTATAAACAAAAAGACGACCTTGAAAGGCAAA 22900 37 100.0 38 ..................................... AATAACCATTCTTTTTGCTCTTTACTTGCCTTTTTAGA 22825 37 100.0 37 ..................................... ATTCCAGTTAATACACGTTCTATCTTTTCCCCTAACT 22751 37 100.0 36 ..................................... TTATATTCGAAATAAAAAGTTTCTTCTGATAAATCC 22678 37 100.0 37 ..................................... GGATGGGTATGTATACTTGAAGGAAATCCAGGCACAT 22604 37 100.0 38 ..................................... GATACGTTCAAAGGAGGTTAAGATAATGGCAGAAACAG 22529 37 100.0 37 ..................................... TAAACAACTGTTTACACAAGTTGACTTTAAGCAAACA 22455 37 100.0 38 ..................................... TCTAAATGATTATTCGTATATTTTACAACTTCATCTTT 22380 37 100.0 37 ..................................... CCAGACTTCTAGGGAAATACTTTAAAGAAATAAGGGA 22306 37 100.0 37 ..................................... TGAATTTGGAAAAAAAGCTGTAACATATAATGAAGAT 22232 37 100.0 38 ..................................... TTCCTTCATCTTTAAATGGTGTACCTTTATACTCCACC 22157 37 100.0 37 ..................................... TATAATTATTTTTCACATAAATATTACTATATCCATA 22083 37 100.0 36 ..................................... TACTCATACCCCAATTTATAATTGGGTCAAACATTT 22010 37 100.0 35 ..................................... TTATTAATTATTTGTATTAATATAAGAATATCTGT 21938 37 100.0 37 ..................................... TTAACTATTTCTATTATATCATCTAGTATTTCTTTCT 21864 37 100.0 39 ..................................... TAATTTTTCCTTGGTCCTGCATATCTCCACGGCCAAGTC 21788 37 100.0 41 ..................................... GAATTTATGTTAAAATTACAATTTTGAATTGTTATAATATC 21710 37 100.0 37 ..................................... TAATGGAATACAGTTATGTTTTGTTGAACACAACCCG 21636 37 100.0 38 ..................................... TTCTCTGGTGATTTTGACAAGATAGGCGAGGATTTCAG 21561 37 97.3 38 ....................................T GGTAAGCATATTCTCCCTAATGGGTCTATATATCTTAT 21486 37 100.0 52 ..................................... ACTGTTCTAAACTTGTTACTTGCAAATTTTCCATGTATTTTATTCCTTTCAT 21397 37 100.0 36 ..................................... TCATATCCAAAAAAGTGGATTTTCCGTTTGATTTAT 21324 37 100.0 37 ..................................... GACAGCATTATTGCAAGGAGTGACACAGTAAATGGGA 21250 37 100.0 37 ..................................... AATTCAGAAATTAATGAAATTGAAGATGAAGAAAAGA 21176 37 100.0 37 ..................................... AAATTAATAGTGGTTCAAAAATACCTACCTTATTATA 21102 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ==================================================== ================== 41 37 99.9 38 GTAAAAGAATAACTTCCATAAAAACAAGGATTAAAAC # Left flank : ATATTTATATGCTATTATATAAATATAGAGTGATTCATACAAATATTAATGTTTTATAACTTAGTGTTTTTACAAATTTATTGATAAAATTGAGCAATAACCCTTGAAATGGTTGATATAACTTGCATGTAGGGGTGTGTTGATACATAAAAAAAGTCATGTTTTTGATAAAAATATGTGGATTTTTATTAAGTTATATTTTGATGAATGATCTAGGATGTAGTTGTTTCAATGTGTTGAGTTTCTACG # Right flank : TTAATGGATGTAATCGTAAATAAAAACTCCAATAAAACAAGGTTTAAATTATGATTGCATTAGATACAAAAACATACTACTATTATAGTTAGAAATATTATTAATAGATGTAATCGTTAAAAAAGTTATACAAGGAGGTGGTTATTTGATCGAACAAATCAAAAATATAGGACATGTAATAACAAGTATTAATGGTAAAAAAGATTTAATTGAATTATGGACTAAAGACACTAAAGAAATGGACAATGTAATTATTGTAGATGTAAATGAAAAAAATCAAAAGATTACTAAAGAATTAGTAAGCTTTTATAAAGATGTTTACAAAGATGCTCTTTTTTATCAGGCAGGAAATGGACATCTAGGTGCTGGTATAAAGATTGAAGGCTACAAAGAAAAAGATTCCAAAAAGATGATAGATAAAAAAGTGGCTAGTTCATTGGACTTTATGGAGTTGGACAAGTGTTATTTACCTGAAGTGTGTAAAATTATAAAAGAAGAGG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAAAAGAATAACTTCCATAAAAACAAGGATTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.68%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //