Array 1 1229879-1241069 **** Predicted by CRISPRDetect 2.4 *** >NZ_NXGA01000001.1 Sporolactobacillus pectinivorans strain GD201205 Scaffold1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 1229879 32 100.0 35 ................................ ATGCTACGTGGAACAGGAGTATCTGGATCCGGATC 1229946 32 100.0 34 ................................ AGCGCCGATGTCTACATAGATCTGATGTGTCTGT 1230012 32 100.0 33 ................................ AGGGCATCAACGGTATTGCACTATATTTGACCG 1230077 32 100.0 34 ................................ TTCCGGAGTCACTTTAAAAGCTGCGCATGTCTTG 1230143 32 100.0 34 ................................ CAGCATTGACTAAATCAATCTCGGTGAATGAATC 1230209 32 100.0 35 ................................ CTTGAGTACCGTGACTACCAGATTATTTAAGGATC 1230276 32 100.0 35 ................................ TTTATACGTATCCGAACTTTATTAAAACGTATGGT 1230343 32 100.0 34 ................................ GGGACTCCATCTCGTAGGGCTTGGGAAGTTGCCG 1230409 32 100.0 34 ................................ TTTTTTAGCAAACGATCAATCGTGCGCAGCGACA 1230475 32 100.0 33 ................................ TAATGCTTCTTTCGGCCATACGAACCCGGACAT 1230540 32 100.0 35 ................................ TCCGGTGCAATCGCGCGCCAGAGTAAAGAGCGGCA 1230607 32 100.0 34 ................................ ACACCGGATGGGTTCTTCTTCGCCGGATTTCAAC 1230673 32 100.0 33 ................................ AGGTGCAAAGTCAACCTGCAAGTCCCGGGGAAG 1230738 32 100.0 35 ................................ CGACATCATGCCTGCCATGTCAACCGCCTGCCTGT 1230805 32 100.0 36 ................................ AGGCCCGGTTAATGCAAACATCACAAATGATAGCTT 1230873 32 100.0 35 ................................ GGCAATATGCCCGCGATGAATAGGAGCAAGGTTAA 1230940 32 100.0 35 ................................ AATACCGAGAAGTTGTGTGATAGCTCCCTTTGGAA 1231007 32 100.0 33 ................................ CCGCAGCAAGATCAATCGGGCCGCTAATCTCCG 1231072 32 100.0 35 ................................ ACTGAAAGGCAATGAAGGGATTGGGAATAAATGTC 1231139 32 100.0 34 ................................ CGGTCAACCGACAGTCAATCTCGCCGCGGGGACG 1231205 32 100.0 34 ................................ CGGTTCGGGTTTCTAACCACGGCGCGGCTAATGT 1231271 32 100.0 34 ................................ TTACAAGTGGAGCGGGCCGGGCAACTTTTCAAAC 1231337 32 100.0 35 ................................ CGGTCAACCGACAGTCAATCTCGCCGCGGGGACGG 1231404 32 100.0 34 ................................ GCAGAGATTCACCCTCTTTTACTAATACGACATA 1231470 32 100.0 35 ................................ AATACCTGAACAAGCCGTGACGTTTAATCATTATG 1231537 32 100.0 36 ................................ AATCGCTCCTTTTGTAAGTCTTTATGATTTTCCCAA 1231605 32 100.0 36 ................................ ATATGATCTATAAGGAGTCGCGGCCATGTGTGGTAC 1231673 32 100.0 36 ................................ TAAGTAAAAACGGAATGGCGTTGCTCTTAGTCGCCG 1231741 32 100.0 36 ................................ AGGCCCGGTTAATGCAAACATCACAAATGATAGCTT 1231809 32 100.0 36 ................................ AGCTTGCTGATGGAGTTGATCTGTGTCCGCTTTAGC 1231877 32 100.0 36 ................................ TTCAAGCACATCATTGTCTGATGGCGGCCCCACAGC 1231945 32 100.0 33 ................................ AGCGCCGATGTCTACATAGATCTGATGTGTCTG 1232010 32 100.0 35 ................................ CGTTAATATCGCGAATACTCCGGGCGTTCAGGTGC 1232077 32 100.0 33 ................................ TATTGTAGATTATATTCACATAACAGAGCAGGC 1232142 32 100.0 35 ................................ AGGGCAACGGTTTTCCAGCAAATTCTGGAGCAAAC 1232209 32 100.0 34 ................................ TGTAATTAATCAAGTTCAGGCTAATAGCAGTCTC 1232275 32 100.0 35 ................................ GGAGTAGGGCAACCCGCTCCCGCGGCCATCCGCGC 1232342 32 100.0 34 ................................ ACAGACAGCGGATGAAGCATGTTCAGCGGAATAT 1232408 32 100.0 34 ................................ TTGAGAACAAAGTATATGGGCGGGAAGAATCCTG 1232474 32 100.0 34 ................................ TATTTTGCCATTTTAAAGCCCGGAAAAGGAATGC 1232540 32 100.0 35 ................................ AACTCCATAAGGGAAGCCCTGTTCGCTCGCGCGGT 1232607 32 100.0 35 ................................ ACCAGTGAGTAGTAAAAATAACTGCCCAGCAAATG 1232674 32 100.0 34 ................................ TAATGCTTCTTTCGGCCAGACGAACCCGGACATT 1232740 32 100.0 34 ................................ CGCATTTGCTTTCTTTAATGAAACAAGCGGACAT 1232806 32 100.0 34 ................................ TTTAGCATCAACGCTCTCATCCGGAACAATGGAC 1232872 32 100.0 35 ................................ ATTAATCCTCTTCCCAATATTTGCTTGTCAAAAAA 1232939 32 100.0 35 ................................ AATTTGCCATCTTTGATTTCAATCGAATTAATTTT 1233006 32 100.0 34 ................................ ATGGTTCCAGCTGTGAGCGGACTAATGTTTTGCG 1233072 32 100.0 34 ................................ AAGAAGAATCTGGCTTTAATCCGAATGCGGTCGG 1233138 32 100.0 35 ................................ CCTTATGGAGTTGAATTTCCATGGACTTTTTAACC 1233205 32 100.0 34 ................................ CGGTCAACCGACAGTCAATCTCGCCGCGGGGACG 1233271 32 100.0 35 ................................ TATTGTAGATTATATTCACATAACAGAGCAGGCGA 1233338 32 100.0 35 ................................ AGCCTTGGTGGACGCCCATCGCTATTTTTAGCAGT 1233405 32 100.0 33 ................................ AGGCTAATAGCAGTCTCACGCTGCCAACGCAGC 1233470 32 100.0 35 ................................ GTATCGGTTGGCGCAGGACGTTCCGGAGCAGGAGC 1233537 32 100.0 34 ................................ AAGAAGAATCTGGCTTTAATCCGAATGCGGTCGG 1233603 32 100.0 34 ................................ AATTCGGAAGGCTCCATCCTCCCTCACCACCTGA 1233669 32 100.0 34 ................................ ATCGAGTCCTGCCACCGTCTGCGCTTGCATCGTT 1233735 32 100.0 34 ................................ TATTAAAATAATAGCCCAATGACCGCGCGAGCGA 1233801 32 100.0 35 ................................ ATCCTCGGAGCTTCCATATTTATATGCATAAAGAG 1233868 32 100.0 35 ................................ GACACGAATTTATTCGATTGCTGGCCGTCGATCAC 1233935 32 100.0 35 ................................ CGGTATCGGTGTCGTTGCAATCACGGTTGGTGCCT 1234002 32 100.0 33 ................................ AGCAAAATATAGAGCCTTGTTTTGATATTATGC 1234067 32 100.0 34 ................................ TATTAAACCCGTGGATATGAAATCAAAAATCAAA 1234133 32 100.0 33 ................................ ACGAGAAAGGCGATATGAACGTTTCATTCTCGC 1234198 32 100.0 34 ................................ GTGGCTGCGGGACGGACGCATAGTAAAGCGCATA 1234264 32 100.0 35 ................................ TGCTCCTGATGCAGCTTGATGAGCGCTGCCGTCGC 1234331 32 100.0 34 ................................ TAGCTGACCGGAAGGAAAATGCTGAAACGTATGA 1234397 32 100.0 34 ................................ TCCGATTCCCGGAGAAGTGGAGAAGCCGAATTCG 1234463 32 100.0 35 ................................ ACAATACCGCCTTGCGGGTCAATATAATCCTTGCC 1234530 32 100.0 34 ................................ CGGTTACCATTAGCGGCACGCCGAATGTTAATGC 1234596 32 100.0 34 ................................ AGCGTAAAGCGTAGTAAATGCGTCGTCTGCCGAA 1234662 32 100.0 33 ................................ ACCAGTGAGTAGTAAAAATAACTGCCCAGCAAA 1234727 32 100.0 34 ................................ AAACGGACGGTGTCGGGCGCGTCATTCCGGAATA 1234793 32 100.0 35 ................................ TTCTTGAACAATGGCTTCCGCAATCCACGCGGGTA 1234860 32 100.0 35 ................................ TAACCGAGGACAATTTTATTTTAGATCAAGATAAT 1234927 32 100.0 34 ................................ ATAGCAAGACAAAGTCTATAAACAGCAGGGCTCT 1234993 32 100.0 35 ................................ TTGGCTAATATCCGAAGTAGAACGACTGAGAGCGG 1235060 32 100.0 34 ................................ TATTTTGCCATTTTAAAGCCCGGAAAAGGAATGC 1235126 32 100.0 34 ................................ ATGCCGATATGACCGAAGATAATCTGACGTGGGC 1235192 32 100.0 33 ................................ AATTCGGAAGGCTCCATCCTCCCTCACCACCTG 1235257 32 100.0 35 ................................ CCGAATTTTGGGAAAATCATAAAGACTTACAAAGT 1235324 32 100.0 35 ................................ TTGGAGGCATTTTGCTGGTGTGGCTTGGAATTACC 1235391 32 100.0 34 ................................ TTTCCTGATTGTTCGGCTGCAAGGTCGAGCCATT 1235457 32 100.0 36 ................................ TGCGCCCGGATGATCGCCGTGTACTGAATCATGATC 1235525 32 100.0 33 ................................ AATTAGTGGTGTTCCATCCTGATGCTCTTTAAC 1235590 32 100.0 36 ................................ AAGCCCTTCTCGCGAGCGGCTTCACGCTCACGAGTG 1235658 32 100.0 34 ................................ GCTTATTCTTCTTCTGCTCGTTTTGACCAATTAT 1235724 32 100.0 36 ................................ AGGTGTCGGCGCAGAACAACTTGGGTGAGTCAGCCC 1235792 32 100.0 34 ................................ ATGAGCATAATCCCTACATCTTAAAACGACATCT 1235858 32 100.0 34 ................................ TGCTCGTTTTGACCAATTATAAATTGATCTCCGG 1235924 32 100.0 34 ................................ AATCTCCGCAAAGAGTGCTTCTTTTTCTTCGCCT 1235990 32 100.0 34 ................................ CGAACCTTGCCGGACTTTCCACGGTACAGGTTAT 1236056 32 100.0 35 ................................ TAAAAAAGAAAGGATTGATTTTATGCCTACACAGC 1236123 32 100.0 36 ................................ TCCGGGCGAGCCGCCAGGATGGCCGGATTCGCCTGC 1236191 32 100.0 35 ................................ GGTTCCGTTTTCCGAAGGGATGGGCGATGTACCCT 1236258 32 100.0 34 ................................ TTACAACTATGATATACATTCCGCTTATCCTTAT 1236324 32 100.0 35 ................................ GATGAATGGGACGCGCGTCCCGCAGGATATGGATA 1236391 32 100.0 34 ................................ ACGAACAAGAATCATGCCGATGCGTATATCTGGC 1236457 32 100.0 34 ................................ CTGAAAAGAGAAGCGGCAGCCGAATGGGCTGCCG 1236523 32 100.0 34 ................................ ACTCGGCTTGCCGACCACTATTTTGTCGCATTAT 1236589 32 100.0 36 ................................ CCCAACTTTTGCCATGACGGCAGCCGGACTATTCGC 1236657 32 100.0 34 ................................ ATGCAACGTGCGATGTATTACATTTTCGTGCTCA 1236723 32 100.0 35 ................................ TCCTCTTTCTCATCCTCCTGATTCTCTTTGCTTTT 1236790 32 100.0 35 ................................ AGTTCCTGCTCAAGCCAGCTTTCTAATGCCTTCCG 1236857 32 100.0 35 ................................ TCTAAACAAGACGGTATCACCCGTTTCAACTGCTT 1236924 32 100.0 36 ................................ ACTTTATGCTGAGACACCGCTGCAACAATGTTTTCA 1236992 32 100.0 35 ................................ AAGATAAAAAGCCGCTTGTTTAAGCTATGGAACTC 1237059 32 100.0 36 ................................ AATAGCGATTCGCCAATTTAGCCTCGACAGAGCCGG 1237127 32 100.0 34 ................................ TACGAAAACCCGATGCCGAAACAGCATGCAAGGA 1237193 32 100.0 34 ................................ ATTTATGCCGGCAGTATCCATGACCTAGCCAGCC 1237259 32 100.0 34 ................................ ATCGCGCTCCTTGTGGATCTTCGAGAAGAAATAA 1237325 32 100.0 35 ................................ TAAGGACGCTTATTGTCATGTCGCAGGCAATGGAA 1237392 32 100.0 35 ................................ CACTATCGTCTCTCAATTTCCCGAGAATGATTTTC 1237459 32 100.0 35 ................................ CCTGCATCTGCTTGTTTGCCGCATCAACCGTGCTA 1237526 32 100.0 33 ................................ GAAACTCGGATCTATCGTCCTGACTTTAAATCA 1237591 32 100.0 35 ................................ AATGCACAGCAATTAGCAAATTCTTTGAAGATCTG 1237658 32 100.0 35 ................................ ATCTCTACGATCAAAGCAGCTGGCTATCAGAACGT 1237725 32 100.0 34 ................................ TACTCTCAACGAGCATGATCTTTTGTGCCCGGAT 1237791 32 100.0 34 ................................ AACCATCATAAACGTATCAAAAACTTCCCCTGCT 1237857 32 100.0 34 ................................ CTTAAGAGGAAGGAAGTGAAAATTTGAATAAATT 1237923 32 100.0 33 ................................ TGGCCATGTTTGATGATAGCAATTGGCTTCAGG 1237988 32 100.0 35 ................................ TCTGATTGCCGCCTTTTTAATCGCTGGTGGGACAT 1238055 32 100.0 34 ................................ TGCTTTCCCGCGTCCATGAGTTGCGCTGCCGCTT 1238121 32 100.0 34 ................................ CATTTGACTAAAAAATTAATCGCCAGCCGTCCAA 1238187 32 100.0 33 ................................ GGTCAAAATTCCATCTGTACACCTATCAACCCA 1238252 32 100.0 34 ................................ GTTTATGTGTGGCTGGCTTTTTGCGCACTTATGG 1238318 32 100.0 34 ................................ TCAATATGCCCAGCAATATGAAAAAAATCTTCCC 1238384 32 100.0 33 ................................ CGGACGCGAGGTTGACCGTGGGATTGCCCTGTA 1238449 32 100.0 35 ................................ GCTTTCGTTTTCCGAAGGGATGGGCGATGTACCCT 1238516 32 100.0 33 ................................ AAACTCGAAAATGTTTTATCGCAATTGGAATGG 1238581 32 100.0 34 ................................ TTTTTTAGAAGAATGCGAGATTATAAGGTTCCGT 1238647 32 100.0 34 ................................ TGCTTTGTGTCTAAAGGCATAAAGGATCATCCTT 1238713 32 100.0 37 ................................ TGATTTTGCATCAGCTTGGATTACCAGCGTCTGCCGC 1238782 32 100.0 33 ................................ TGTTCCGTCTCTGCCACAAATGACGATCCCGGA 1238847 32 100.0 36 ................................ AAGATCGTTCGCCATTTTTAGATCATGCCTGACCAT 1238915 32 100.0 34 ................................ AAAACCGCTGGTCGGAGCAAGCGTACTCGCGCTG 1238981 32 100.0 35 ................................ AGAAAAATTTATTGGATCGTATCGATACCAATCTT 1239048 32 100.0 35 ................................ CAAACAAACGCATAAACATCAGGTTCAAAACCATA 1239115 32 100.0 34 ................................ CGCTAAAGCTCCATTACGTCGCAGCTACTGCCCT 1239181 32 100.0 33 ................................ ACTTACGCACGAAACATTTCTTGCATATTTTTA 1239246 32 100.0 35 ................................ AAGAGATAACAGCGGAACGGATGTAAGTCGAGAAT 1239313 32 100.0 34 ................................ CACAGCTGCTGGATCCGATTTTATGACGACGACG 1239379 32 100.0 34 ................................ ATTCCGCTGCGCCTTCTTTCAGCAGGGACGGATT 1239445 32 100.0 34 ................................ ACATTATCAGGGCACCGTTGATTTTAGAAAAGTT 1239511 32 96.9 35 ...........T.................... CTCAAACCATGCCCAGGAAAGAATGCCGGTATCAA 1239578 32 100.0 34 ................................ ATCAATACTAAAAGGCTCAACGAGAGGGGTAAAG 1239644 32 100.0 35 ................................ ACTCCCTTTCCTTCCTTTTCGCGCGCTTACTATGC 1239711 32 100.0 34 ................................ TGGTCGGGCTGATCGTGATTATTTTCGGCCTGGC 1239777 32 100.0 34 ................................ ATAGGAGGAAAACAGATGATACGAGGCTTCGACC 1239843 32 100.0 34 ................................ CCGTCGGTCATCTTTCAGGCACTTGGACTTTTCC 1239909 32 100.0 34 ................................ GTATCGACCACGTTTAGGAGCGGATCCGGGCCAA 1239975 32 100.0 34 ................................ TTTTCTCACCTCTTTTCTACTCTTTTATTATATC 1240041 32 100.0 35 ................................ TGCTCTGGGATGCGCTGGTTGTTGGCGACAATGAT 1240108 32 100.0 35 ................................ ATACTATTGTCGATCCCGGCTAAAAAGCTGCCGAG 1240175 32 100.0 34 ................................ ATGTAGATGCTGGGGGCGCCACCGTTTAGAATAA 1240241 32 100.0 34 ................................ AATAAATGCGCCAAACGCTCCAAACGCCGTTTGT 1240307 32 100.0 35 ................................ AGGTTTAATCTTTTCATGTTATGGGAAGTGATATA 1240374 32 100.0 35 ................................ CATATTGTGGCGCGTCTGTTCCGACAATTCCGCTT 1240441 32 100.0 34 ................................ CAGTTAATATCTATACCGCTCCCTCTTATGTTTA 1240507 32 100.0 34 ................................ CGCAAGATGCTTTATGATGCTCAAATAAGGTTTC 1240573 32 100.0 36 ................................ GTGCCAACCTCGATAAGGATAAAGCCGAAGACGACG 1240641 32 100.0 34 ................................ TTCTCTTTCTTCTAATTCCCAAAGCTTTTTTGAA 1240707 32 100.0 34 ................................ ATGCGCTCACGCTCCTTTTTGGCAAATAAAAAAG 1240773 32 100.0 34 ................................ TAAAAACCCGTTGTTTTCTGAACATGATCTCAAA 1240839 32 100.0 35 ................................ CGAAGCATCATAGCGCCGTCAAACGCCAGTAATAA 1240906 32 100.0 34 ................................ GGAGCGGGCTTAGGCGCAATCGTCGTTTTGCTTG 1240972 32 100.0 34 ................................ ACGCTGAAAGCGATCAATTTTGGAACCGTTTTCT 1241038 32 96.9 0 ...........................A.... | ========== ====== ====== ====== ================================ ===================================== ================== 169 32 100.0 34 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : TGATGAGTATCCGCCATTTTTATGGAAGTAGGTGCTGGGAGTTGTTGGTGCTTATTACTTATGATGTTAGCACAGTAACGGGTGCCGGACGAAAGAGATTGAGAAAAGTGGCTAAGATCTGCCAAAATTATGGACAACGGGTCCAAAATTCAGTTTTTGAGTGCATCGTTGATGCTACCCAATTTACTAGCCTTAAAATAGAACTCGCCAACGTTATTGATGTATCTCGGGATAGTCTCAGATTTTATCAATTAGGTAAGAACTATAAAAATAAGGTTGAACATATTGGTGCCAAAGAATCGGTTAACTTAGAAGGGCCGCTACTTTTCTAGTGCGAATGTTTAGCTCACAGATTTTTTGGGGAACATTCGCACCAATTTTATCTCATAAAAAATGGATATATTTACAAAAATATCTATTTACATTTAGTTTACTGAGTTTATTAGCGCGATTTTCGTGAATTTTCAACTTAATTTTCTTTACATTCATCGAAAATCGCC # Right flank : TTTGGTGAACGTGAAGAACGGCTAATAACAAATCTGTCTTACTCTTATTATGAATTGGTTATTCTAAAAATCGGTCCAGCTGTTTTTTAATCAAACAGCTGGACCAGTAACCTATTATAAAAACCTATTGTCACATTCTCAACAAAATTGGACTGTATTTCAAATGAAGATTCATTAATTGATGCCACAGGAAGAAACATCCATTCAGCGTATTCTGAAAATAAAACATATTTATTTCCATTTTTCAGCTGGTGCGCACCAACTGGGTGGAAGTCCAACTCCATCACCCCTCAGCATCCACCCAGACTTTCTTCGCTGTATCGACAACCAATTTAATCTTTGCCCATTGCTGCTCTTCGGTCAGTTTGTTGCCTTCCTCAGTCGAAGCAAAGCCGCATTGTGTTGACAGGCACAGATGATCCAGTGGCACGTATTGGGTCGCCTCTTTAATCCGTTTTTGAAGCAAGTCCGCGGATTCCAGTTCAGGAAATTTCGAGGTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //