Array 1 54890-56826 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRPW01000027.1 Phocaeicola vulgatus strain AF34-15 AF34-15.Scaf27, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 54890 33 97.0 34 ................................A ATATATACAAAATTATCTTACAAAAATCGGATAT 54957 33 97.0 33 ................................A ACAACTATGAGAACGTATTTTGCACAAGTTGAA 55023 33 100.0 32 ................................. TCTTCAATCACCTGAGCATCAGTTATTTCTAT 55088 33 100.0 33 ................................. ACACATCCTTCAATCTCAGATGCCCAATTCTCA 55154 33 97.0 33 ................................G GAAAACCAGCAGAAGCCCTATACTACTTTATGG 55220 33 100.0 32 ................................. GAAAACATACTGTACGATTTTCTACTATCTTA 55285 33 97.0 32 ................................A GCTATGAGAAAGAAATACGCTAAAAAACAATT 55350 33 97.0 32 ................................G ATGAAATACTTGAAGCTAACAGGGATGTGCTT 55415 33 97.0 32 ................................A TGTCAAACACGCCTGTAAACCATTCTACAATA 55480 33 97.0 35 ................................A GCAGCTTTGCTGTTTCCAATGTTACAAGTTCTTCG 55548 33 97.0 31 ................................A AATCAGGTATATGGATATCCAGATTATCCGG 55612 33 100.0 33 ................................. TTTGATTTTATCTGTTGATCTAAACCTCCTATA 55678 33 100.0 32 ................................. ATTTCATTTGCACCGTTGGATAATTTTGTAGG 55743 33 97.0 33 ................................A TGTCTGCCTTGCTTATTTCGGTTGCCAGATTGG 55809 33 97.0 33 ................................G TAGACTGATTGAAATCTTCACCGATAAGGGTGA 55875 33 97.0 32 ................................C GTCCTCCGGAACAACTGGAGGGTGAAGCCTTT 55940 33 97.0 33 ................................C AACAGTTGGGGGTGTCCGTAATGGGGCGTTCCG 56006 33 100.0 33 ................................. CTGACAGTAATATAGATACTTTAGCAGTAGATA 56072 33 100.0 33 ................................. CATGATGCGATACCGTATCAGTGATATGGCGGA 56138 33 97.0 33 ................................A AAAATGGTCTTACAACAACAATCTTATAGGATG 56204 33 97.0 32 ................................A TTATGCCGTTATGTTTAATGATTTTAAGCCAT 56269 33 100.0 32 ................................. CCCGAATATCTGACATATTATGCTGTGATATC 56334 33 97.0 31 ................................C CTTGAAAAGAGAAGATATCATGTTGCTGTTC 56398 33 100.0 33 ................................. TACTGGGAGATGATATCCGATCTGGAGAACGGA 56464 33 100.0 33 ................................. TTATTAGAATGATACACAACAACCAGCAAGAAG 56530 33 97.0 32 ................................C ATGACGACCCAAAGCATAATAATCTTAACTTA 56595 33 100.0 32 ................................. CTCCTCCGTGTATAGTTGCATTTATATCTATT 56660 33 97.0 33 .............................G... CGAAATAGCGTAGCGATCCTTGCTCATCACAAG 56726 33 97.0 33 ................................A CGCAATCCACCACTATCATAGCTCGGATGAACT 56792 33 90.9 0 ....................A.........G.A | TA [56811] ========== ====== ====== ====== ================================= =================================== ================== 30 33 97.9 33 GTCACACCCTGCGTGGGTGTGTGGATTGAAACT # Left flank : ATATTGACGATTATCCGGTATTTCTTATAAAATGATTTTTAATTATGTACATTCTTGTGACTTACGATGTGGATACTACAAGCAAAGAGGGGGCTCGCCGTTTACGATGTGTGGCCAAGGCTTGTCTGGATTATGGACAGAGGGTGCAGAACTCAGTCTTTGAGTGTGTAGTGACGGAAGCGCAATATTCTCTTCTAAAAGGGAGAGTTAGGGATATTATTGATATGTCTCTTGATAGTGTTCGTTTTTATATTCTTAGTAAAAATGAGAATAAGAGGGTGGAAGTAATAGGTGTTGAAACGGCGTATAAACTTGAGGAGGCTCTTATAATATAATGCGAATGTGGTGTGTTACAAAAAAAGTAGTATCTTCGCATGTGTTAATAATCAGTAGATTAAATTATTTGTAAAGTATTTCTTCGTTATGAAGTTGAATAATAATGATGATTCGCATAACAGTGGATTAAATTTGCTGATTTATAATATGTTATTAGATATAGA # Right flank : TTGTTCACTCGTTGGTCAAGTTTATGGAAGAATTGTAAGCATTCGGCCTCTTGTGTATTTCTCTTCAAGCTGTTATAAAGTCAAAAGCCAAACGAAGTACGTTAGGCTTTTGACTTTGTTATGACTGGAAAAAACACGCACAATCCCGGATGCTTATCTTTTGTCTGTCTTCTTTTGTGGTTTCACCTAGGTGACAATACATTGGCATCTAAGTGGAGAGGCGTAGTCACCCAAGTGATACGCTTGCTTCACCTTGGTGAAACTATAAATTCAACTAAGTGTTTCAAAGCAAATATATTATATTTTTACTATACTATCCCTTGTTGCTTATTTGTTATGTTATTGATTATTAATGTATTGTTATCTGTTTGTATCGATTGTTTTTCTTGTCTTTATAAGATATATTAAAACATAAACTAACATGAA # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACACCCTGCGTGGGTGTGTGGATTGAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCTGCGTGGGTGCGTGGATTGAAACA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.50,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //