Array 1 18962-18139 **** Predicted by CRISPRDetect 2.4 *** >NZ_JZWY01000420.1 Streptomyces sp. NRRL S-495 contig61.12, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 18961 29 100.0 32 ............................. CCGGACAGACCGCAACACGCACTCCTGGACGT 18900 29 100.0 32 ............................. CTGGAATGGGCGGCCAGGCAAAGGCGAGAGAG 18839 29 100.0 33 ............................. CACGCGCACATCCTGCTCACCCCGGAGGCCAAG 18777 29 100.0 32 ............................. CAGGCGACCGTGCGGAGCGGCACCATCCAGCT 18716 29 100.0 32 ............................. GTCTCCTCGGCCCGGCGCAGCTCCAGCCCGGT 18655 29 100.0 32 ............................. CAGCCCCAGGACTGCCCCTGGGCCGCGGCCGC 18594 29 100.0 32 ............................. CGCTCGGGCGGGTTCTTGGCCAGGAACATCTC 18533 29 100.0 32 ............................. GCGTCCTCAGCGGACGGCGTGGTGGTGAGGTG 18472 29 100.0 32 ............................. TTCTTGACGGTGTTCGGTGGAGGTCCGAAAGC 18411 29 100.0 32 ............................. TGTGCGATGCCATGTTCGCCAACCAGCGGTGC 18350 29 96.6 32 ......G...................... GACATCTGCGCCCGCCTGCCCAAGGGCGCCGA 18289 29 100.0 32 ............................. TCGTCCAGGACGCGGTGGACCACCTCGACACC 18228 29 93.1 32 ....................AC....... ACCGAGGAAGACGTGCCGGAGGTTGTAGCGCT 18167 29 96.6 0 ...........................T. | ========== ====== ====== ====== ============================= ================================= ================== 14 29 99.0 32 CCGCTCCCCGCGCATGCGGGGTTGGTCCC # Left flank : CCGCACGCCATCGGCCGCACCTATGCCCGACTCACTCTCGGCAAGGCTCTCGACACGGCCGACCGCCAGCGGCTGACCCGCTGGCTACTGACCAACACCACCGGCGCCAACCGCCTCCACGCCGGCCTACCGACCACCTGGACCGTCGCCGAGAAGACCGGCACTGGCAACTACGGCACCACCAACGACGTCGGAGTCACCTGGCGACCGGACGGGGGCCCGATCGTGGTGTCGGTGCTCTCCACCAAGCAGATCGCCGACGCCCCGGCCGACGAACCACTGATCGCCGAAACCGCCAGGCTGATTGCCAGCGCCCTGTCCTAGTGTCCGATGTATCGCAACCCTGCCACCACCGCCGAAGGAGAGTAGCCATGCCATGACCCCGCACGCCCGGTAATCTGACATTGACTCATACTCTTTCTGGATTGCGAAGAATACCCGAATCAGAGGAAGTTGCCAGAACCTCCGCCCACACGTGACAACGCCCCAGCTCACGAACT # Right flank : TCCCCCGCAGCGGGCCCCGGGTAGGTCGGTACGCTTCGCTCGACCCGAAGCCAAGATCGCGCGAGGTATCCGTGAGTAGCGAGTGGACCGTCCACGGCAGCCGCACCATCTACAGCAGTCCCTGGGTGGAACTCGATCTGGTGGATGTGGAGCCGCCTGGGCACGAGCGCTACGAGCACCACCTGGTGAAGTTCGCGCCGGTCGCCGCGACCGTCGTCCTCGACGACCGGGACCGCGTCCTGATGATGTGGCGACACCGCTTCGCCACGGACACGTGGAACTGGGAGATCCCCTCGGGAATCGTCGAGGCCGGCGAGTCGCTGGAGGCCGCCGCCGCCCGCGAGGTCGAGGAGGAAACCGGCTGGCGGGTGGCCTCGCTGGAGCCGCTCGCCTACTACCAGCCGATCGGCGGGATGTCTGATGCGGAGCACCATGTCTTCCTCGCCCGCAGAGCGGAGTTCGTCGCACCGCCCGTCGACACCCACGAGGCGGACCGCATC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGCTCCCCGCGCATGCGGGGTTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCATGCGGGGTTGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 20536-20262 **** Predicted by CRISPRDetect 2.4 *** >NZ_JZWY01000420.1 Streptomyces sp. NRRL S-495 contig61.12, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 20535 29 93.1 32 ..........T.................A CCTCGATCCCCTGGAGGATCTGCCATGAACTC 20474 29 96.6 32 ..........T.................. GAGCCGGCCCGGTGCCGCCGCCACCGTCGCGA 20413 29 100.0 33 ............................. GCGCAGCAGTTGCTGTACGACCGGTTCGAGATC 20351 29 100.0 32 ............................. TCCGTCTTCGCGAAGTCGGCCCACGAGCCGTA 20290 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 5 29 97.9 32 CTGCTCCCCGCGCCTGCGGGGTTGGTCCC # Left flank : TCGCAATTGACCGACGGAGCAGGCATACCGCTGATCACCGAACCCGCGCAGGCCAACACTCGCGACCACACCCTGCTACCCGCCGCCCTCGACCGATACGACGCACTGGAGTCGGCCCTTGGACCGCTGCCGGAGCACCCGAGCCTGGCCCTGGACGCCGGATACGGATACGGATACGGATACGGATACCGCATGCTCCACGACGACCTGGCCGCCCGCGGGATCGAGGCCCGCATCGCCCCACACGGCGCGAAAACTCCGATCCAGACCGCAGGCCGTTGGGTGGTGGAGCGCACGAACTCCCAAGCGATCACGGTGACAGTCATCGTCGGTATGTGTCATCTATCGGCGGTAATCCCACGGGGCCTGGCAGGGTGAACACCCTCCGCACACCGCTCACCGATAGCCTGGCGGCAGCGAAAGGAATGCGAAGATTGCCCGAATCAAAGGAAGTTGCACAAAACGCCACCCATCCGTGACCACGCCCCAGGTCACGAACT # Right flank : GATTCGCGCCCGCGCTGATTACGCATTACAGGCACCCACCAGAGAAGCCGCCAGACACAGAGAAGCGACGTCCTGAACGTGAGACGCCGGACGTTGCCCCCTCGTTGAACGACTACCTCGGCGTCCGATGCAGTGAATTCGGCGATACGTTCATAAGAGGCCTCGCGTGTACGGGAATCCTCGCGAGCACAGCGGCAAGAGGAGGCAGCATGAGCTATCAGCCGGGTCGGCGACAGGTTCTTGGTGGATTTGCGGCGGCTGCGACAGTCACCGTTCTCTCCGGTGGAGGGCGAGCCTTCGCGCAGGGGACAGACTCACGTGGAGACGAACTCGCCGATCGATTGTGCGCCTTGGAGAGGTTGCACTCCGCACGGTTGGGCGTCTTCGCCCAGGACGCCGCCACTGGGCGGAATGTGGCCTATCGCGCGCACGAACTGTTCCCCATGTGCTCGACGTTCAAGACGATTGCCGTGGCCGCGGTGCTGAGGGATCTCGATCGG # Questionable array : NO Score: 5.96 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCCTGCGGGGTTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCCTGCGGGGTTGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.15,4.5 Confidence: MEDIUM] # Array family : I-E [Matched known repeat from this family], // Array 1 3-399 **** Predicted by CRISPRDetect 2.4 *** >NZ_JZWY01000540.1 Streptomyces sp. NRRL S-495 contig80.3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3 29 100.0 32 ............................. GGGGCGCAGCGGGGGCGTGGGGCGCCCTTAGG 64 29 100.0 32 ............................. ACGGTCAGCGGCGGTCTGGAGATCTGGTCCGG 125 29 100.0 32 ............................. TGCCCAACTCGCCGATCTCCTCCATCGGATAC 186 29 100.0 32 ............................. TGGGGCAACCGGTGCCAGCGCACCACCCACCC 247 29 100.0 32 ............................. GCCACGTTCTCCTCGGTGGTCGGCTGGCCGCT 308 29 93.1 32 .............C...A........... TCCTCGGCCAAATCGGAGAGCTTCCAGCCGGT 369 29 82.8 0 G.....................G..G.AG | T,T [384,386] ========== ====== ====== ====== ============================= ================================ ================== 7 29 96.6 32 CTGCTCCCCGCACACGCGGGGATGGTCCC # Left flank : CCC # Right flank : GATTGTGGCTTGGACATCTGCGCAGGAAGTCGGATACGTCGACTTCCTGCGCAGGACGGTGGGGTACAAGGCTCCCGATCCCGTGGTCCGGTTCGGGTTCGAGCCGCCCGGCGTAGAAGACGCGCGGGCTGTGGACCTGGACCGCCACCGCAGCAGAGGCGTTGCACAAGTTCCAGGTCGGCTGCGGTGCCGACGGGATTCGAACCCGCGGACAGATAGGGACAGGCCCGCCCGTCTCCGTCAGTCGACGTGAGCGGGGCATCGCCCACGTCGATCGCAATGGGCCGCTCTGCCACGGCACCGCAGCCTGCGGGAATGCGCGCGTTCCCGCTCCGGGACAAGGTAGCGGGACGGCGTTGGCGTAGCGATTCTTTATCCAGCAGCGACAGCGGGGTGCGGACCGTTGTGCTGGGCCGGGCGCCGATCTTCTGACGATCGGCTGAAGGTTGTCCCGTAACTGCTCTTCGACAGCACGGGAGTGGCGCCGGCCGGGTTCCCTC # Questionable array : NO Score: 6.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACACGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACACGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 6104-6315 **** Predicted by CRISPRDetect 2.4 *** >NZ_JZWY01000540.1 Streptomyces sp. NRRL S-495 contig80.3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 6104 29 100.0 32 ............................. CGGGCGCTCCCGGCGCCGATCTTCGACGTCGG 6165 29 100.0 32 ............................. AGACCCAGCTCCATACCGCCCTTCAGGTCGAT 6226 29 96.6 32 ..............T.............. ATTCGCGTGGACCTTGTCCCGAGTGGTCTCCG 6287 29 89.7 0 ............C..T........C.... | ========== ====== ====== ====== ============================= ================================ ================== 4 29 96.6 32 CTGCTCCCCGCATGCGCGGGGTTGGTCCC # Left flank : CACGACCCGCGCATCCGTACCTACTCCGAGGCCGAGGTCGACGCGCTGCTGCTCGAACTCCACGAGCGCGGAAAGGCCCTCGGCATCGTCTGGCCCTCGGCCACTGCCGAGGGCCTGGTCGACGGCCGGGTGCTGGTCCGGTTCGGCAACGCCCCGACCGCCACCCTCCTCAACCTCCTCGCCCTGCTGGAGGACCGGCCGTGAACGCGGCCCGGCTGCTCGTCGGGATCGCGCTCTCCTTCCTCGCCCTCCTCGCCCTGGCGACCGTCGTCCTCGGCGTCCGCCTGGCCTTGCGGATGCCCGGGCGTCCGGAGGACGACGAGTTGTCGGACTGACACCGCCACGCCCACCAAGGCCGTTCGGGGGCAGGTGTCGGACGGCCTTGGCACGTTATGGCCGGCATGTGCGGGGATCGGCTGCCGGACGGCGGTTGCCGCAAGACCACCGCGCGACCACGTTGGCCGGGGCTACGTACCCGCCCTCGACGACCAGGACCTCGA # Right flank : CAAGGTCACCGGCAAGACCTGTCTCGGCTCTCCCCGCGCACGCCGCATCGACGTGAGGTTCCAGGCTCCCGCCCCTTCGGCGAAGGGGCGGGAGCCCGAGCCGAACTTGTGCCCCGGTGCCCGTTGGTAGTCGAAGAGTTCGTTGCCCCAAGCCCTCAGGTGGACCCGGCCCCCGTTCCTCCCGCCGGCCTCGGACCGGCGTAGTCGCTGTGCGAGGATCGGCCGCCGGAAACCCGGTGCCACAAGACCGCCGCGTGATCGCGTTAGTAGGGCATGGAGCAAATACAGGGGGCGCCGCCCGACTTTCCGGCCTTCGTGGCGTCGCGGGGGCGTCATCTGCTGCGGACGGCGTTCCTCCTTACCGGTGGTGACGCGCATCTCGCCGAGGACCTCGTCCAGGAGGCGCTCGGCCGCGTCTTCGTGAAGTGGCGTCGGATCTCGCGCATGGACAATCCCAGCGGCTACGCGCAGGCCGTCCTGGTCAACACCTTCCTCTCGCA # Questionable array : NO Score: 5.69 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCATGCGCGGGGTTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCCTGCGCGGGGATGGTCCC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [28.3-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 7255-7526 **** Predicted by CRISPRDetect 2.4 *** >NZ_JZWY01000539.1 Streptomyces sp. NRRL S-495 contig80.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 7255 29 100.0 32 ............................. TGCGGGATGGTGATCATGTCGGCCTTGATGGT 7316 29 100.0 32 ............................. CGGCAAGCACAGTTGGATCGGTGGTGGCGGCG 7377 29 100.0 32 ............................. GGGATCTTCAGGTAGGCGTCACGGTTCTGGTT 7438 29 100.0 32 ............................. GCCACCGAAACGACCCCGCCGCGCCCCGTTTC 7499 28 96.6 0 ............................- | ========== ====== ====== ====== ============================= ================================ ================== 5 29 99.3 32 CTGCTCCCCGCACACGCGGGGATGGTCCC # Left flank : GCCGACCTCGGCCTCTCCGGCGCGGCGGGCTTCTACGGCGTGCCGCGCTTCTTCGGCGACCGGACGGAGCAGCTGACGGCGCCGCTGCTGATGCTGCTGGCCGGCGAGGACGTGGTGACGACGCGGGAGGAGTTCGCGGAGTTCACCGGGGGTCTCGAGCGTGCGGGCAAGCAGTACGAGATGAAGGTCTACGAGGGCGCCCCGCACTCGTTCTTCGACGACAGCGACGAGGACTGGAGCGAGGCGTGCACGGACGCCTGGCACCGCCTGCTGGCCTTCACGGGGGTACGGGTCGGCGAACCGGCGGCGTGAGGGAGGTGGCCTTGCCCGGCCCACCGAGGCGAACTCGTTGGGCCGGGCCCCGCAGCGTCGGCTTGAGCGGGCAGCGTAGGCTTCGGTTGCCCCTGAGGGCTTCCGGGATGGTGATGTACCAGATGTCCGATTCTCAAGAAGTTGCGAAATCCGGCTCCCTCGCCGCTTGAACGCGGAGGTCACGCACT # Right flank : | # Questionable array : NO Score: 6.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACACGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACACGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-14.10,-14.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 3436-4136 **** Predicted by CRISPRDetect 2.4 *** >NZ_JZWY01001118.1 Streptomyces sp. NRRL S-495 contig200.4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 3436 29 100.0 32 ............................. GAGGAACCGCCGGCGGAGGAGAAGGAGAAGGG 3497 29 100.0 32 ............................. ACCCGCTCGACATCGTCGGGCAGAGCCAGCAG 3558 29 100.0 33 ............................. CCGGATTATTCTGGATTCCGACAACGGCAAGAT 3620 29 100.0 32 ............................. ACCCGCTCGACATCGTCGGGCAGAGCCAGCAG 3681 29 100.0 32 ............................. CGCTCCTGAGACCCGTCCGTCGGGTCGTACGC 3742 29 100.0 32 ............................. TACTACTGGCTGCACCAGTCGCCGGACGGGAA 3803 29 100.0 32 ............................. CTCAACCTCTTACGCGGGCCCGTCAGGCTGCC 3864 29 100.0 32 ............................. GACGGCGGCGCCCACACCGTCCGGTTCTGGAC 3925 29 100.0 32 ............................. TGAACCTGCGCGTGGTCGAGGACCTGGGCGGC 3986 29 100.0 32 ............................. GCTCGCCCGGGGTGCCTTCGACGCCGTAGGGC 4047 29 100.0 32 ............................. CCCGCCTGCTTCGTCTACCCGGACGGCAAGGT 4108 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 12 29 100.0 32 CTGCTCCCCGCGCATGCGGGGTTGGTCCC # Left flank : AAGCTGCCGCGCGGCGGCCAAGAAGAAGAACGCCGCGACCAGGGCGGCGGGAAACAGCAGACTTCCTGCGAGACTCACCATGCTCAGCATGTCCGGGTAACGTCCGGCCCGCTGACGGCGGTTCCGCCAATGAGCCTTGCTTCGGGCGGCGTTGGGGGCGGGCATCCTCGTGCAGTGGCCCTGCGGCAGCGCCCTTGCGACCACGGCTCCCCCGCACAAGCCGCACTGCGGTCGCGGCAACCTCCCCCTCGGGCGCGACGGCGAAGCTTCGAGACCAGGCAGGTGCGCGAGCGCGGGAATCAACCGGAGGACTCGGACAGCTCGGGTTGGATAGGGTTGGCCGGGTGCGCAGCCCGCCTGCGAGGGTGACCGAAATGCCTGAATCTCTGGAAGTCGCAGAATCCCGCCCCCGCGCCGGATAGACCCGCAACTCACCGACTCTGCTCCCCGCGCNGCGGGGTTGGTCCCCGCTCGCACTCGGCGGCGTACGCCTTCCAGTT # Right flank : TTGTAGATCGCCATCGGGGACAGCAGGACCAACTGCTCCCCGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCATGCGGGGTTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCATGCGGGGTTGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [25.0-26.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1317-1467 **** Predicted by CRISPRDetect 2.4 *** >NZ_JZWY01001117.1 Streptomyces sp. NRRL S-495 contig200.3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1317 29 100.0 32 ............................. CGACTGTGGTGAATTGGGTTGTGGAACCAGGT 1378 29 100.0 32 ............................. AAGAGGTCACGAAGGTGCTGCTGGACACTCAA 1439 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 100.0 32 CTGCTCCCCGCGCATGCGGGGTTGGTCCC # Left flank : GGCAACGTCCTCGTCGGCCCCGGTCACGCGGCCCGCGTGACCGGCATCATCGACGTCGAGAACGCGATCGCCGCAGACCCCCTGGTCGACCTCGCCAAGACCGACTACTACTCCCTCGGCCGCGGCGAACCCGAACGCCATGCCCTCTTCGAGGGCTACGGACCGCTCCCTGCGGACGCCGCCGAACGCCTCGACCTCTACCGGCTCTACCACGCCATCGAATTGTGGGACTGGTTCCGCTCGATCGGCACCCTCGGCCCTCTGGACAGCATCGCCGCCGACATCGCCCGCCTCGCGGGCCAGCGCTCCGACTCGCCGTCGTGACCCGGGCCAGGCGCAGCCCACCCGTGCACGCGGGACGGCGGGCGGAGGCGGAGTCGGCCGGGATGGATAGGGTGACCCCGGTGCACAGCTTGCCGGCAGAGGTGACCGAAATGCCCGAATCTCTGGAAGTTGCAGAACTCTGCCCTATAGCCAGATAGACCCGCAGCTCAACGACT # Right flank : GCGACGTTCGCGTTGGTGTTCGGGGTGGCAGCCTGCTCCCC # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCATGCGGGGTTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCATGCGGGGTTGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [48.3-20.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1049-1318 **** Predicted by CRISPRDetect 2.4 *** >NZ_JZWY01001122.1 Streptomyces sp. NRRL S-495 contig200.8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1049 29 100.0 32 ............................. GACGGTCGCCGTAGCGAGGCCGATCATGATGG 1110 29 100.0 32 ............................. AATGCACATATGCTGACCAGTCCACTTGATGT 1171 29 100.0 32 ............................. ATCCACATCGGCCGGTAGGCCATCGGCGCCGA 1232 29 100.0 29 ............................. AATGCACATATGCTGACCAGTCCACTTGA 1290 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 5 29 100.0 32 CTGCTCCCCGCGCATGCGGGGTTGGTCCC # Left flank : CGGTCGAGCCCTGGCTGAGCACGGGGTGGTGGCTCGACGAGGTGCAGGGGCAGAAGAGCGGAGAACGCGGTCGCTGCGGACCCGCTGATCGACGTGGCCGAGGCCGACCACTCCCTCGGCTGTGGCAAGCCCGAACGCAACACACTCTTCGAGGGCCGCGGTCCGCTCCCTACCGATGGCACGGAGCCCTCGACGGCTACCGGCTCTACCGTGCGCTCGAGTTGTGGGACTGATTCCGCCCGATCAGCGCTACCGGCCCCCTGGACGGCGCCGACGACGACATCACCCCGGACGGCGAACCAGCGCTCCACCGCGCCGTCGTGCCTCGGGCCAGGCACCGCCCATCGGTGCACTCCGCACGGTGAGTGGAGGCGGGTTCGGCTGGGATGGATAGGGTGACCCTGGCGAGCGCCCTGCTGGCGAAGGTGACCGAAATGCCCGAATCTCTGGAAGTTGCAAAATCCCGCCCCATTGCTGGATAGACCCCCAGCTCATGAACT # Right flank : GGC # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCATGCGGGGTTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCATGCGGGGTTGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [48.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //